Cuculus canorus (common cuckoo): 104066279
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Entry
104066279 CDS
T08597
Name
(RefSeq) actin, cytoplasmic type 5
KO
K05692
actin beta/gamma 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03082
ATP-dependent chromatin remodeling
cuca04145
Phagosome
cuca04210
Apoptosis
cuca04510
Focal adhesion
cuca04520
Adherens junction
cuca04530
Tight junction
cuca04810
Regulation of actin cytoskeleton
cuca04814
Motor proteins
cuca04820
Cytoskeleton in muscle cells
cuca05100
Bacterial invasion of epithelial cells
cuca05132
Salmonella infection
cuca05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104066279
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104066279
09143 Cell growth and death
04210 Apoptosis
104066279
09144 Cellular community - eukaryotes
04510 Focal adhesion
104066279
04520 Adherens junction
104066279
04530 Tight junction
104066279
09142 Cell motility
04814 Motor proteins
104066279
04820 Cytoskeleton in muscle cells
104066279
04810 Regulation of actin cytoskeleton
104066279
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104066279
09171 Infectious disease: bacterial
05132 Salmonella infection
104066279
05100 Bacterial invasion of epithelial cells
104066279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104066279
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104066279
03036 Chromosome and associated proteins [BR:
cuca03036
]
104066279
03029 Mitochondrial biogenesis [BR:
cuca03029
]
104066279
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104066279
04147 Exosome [BR:
cuca04147
]
104066279
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104066279
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
104066279
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
104066279
NuA4 complex
104066279
Chromatin remodeling factors
BAF complex
104066279
PBAF complex
104066279
GBAF(ncBAF) complex
104066279
SWR1 complex
104066279
Mitochondrial biogenesis [BR:
cuca03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
104066279
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
104066279
Exosome [BR:
cuca04147
]
Exosomal proteins
Proteins found in most exosomes
104066279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
104066279
NCBI-ProteinID:
XP_053933864
LinkDB
All DBs
Position
12:complement(17356098..17358446)
Genome browser
AA seq
376 aa
AA seq
DB search
MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPESIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaggagatcgctgcactggtggttgacaatggctccggtatgtgcaaagca
ggctttgcaggggatgatgccccccgcgctgtgttcccctccatcgtgggacgccctcgg
catcagggtgtgatggtgggcatggggcagaaggacagctacgtcggggatgaggcccag
agcaagagaggcatcctcaccttgaagtaccccattgaacatggcatcgtcaccaactgg
gatgacatggagaagatctggcaccacaccttctacaatgagctgcgtgtggccccagag
gagcaccctgtcctgctcactgaggcccccctgaaccctaaggccaaccgggagaagatg
acccagatcatgtttgagaccttcaacacaccagctatgtatgttgccatccaggccgtg
ctctccctctatgcctccggccgcactactggcattgtcatggactctggggatggtgtc
acccacactgtccccatctatgaaggctacgcactgccgcacgccatcctgcgtctggat
ttggctggccgtgatctgactgactacctcatgaagatcctgacggagcgaggctacagc
ttcaccaccacggccgagagagagattgtgcgggatatcaaggagaagctctgctatgtt
gctctggactttgagcaggagatggccactgctgcctcctcctcttcactggagaagagc
tatgagcttcctgatgggcaagtgatcaccattgggaatgagcgtttccgatgtcctgag
tccatcttccagccctccttcctgggcatggaatcctgtggcatccatgagaccaccttc
aactccatcatgaagtgtgacgtggacatccgaaaggatctgtatgccaacacggtgctg
tcaggaggtaccaccatgtaccctggcatcgctgaccggatgcagaaggaaatcactgcc
ctggcacccagtaccatgaagatcaagatcattgctccgccggagcgcaagtactccgtc
tggatcgggggctccatcctggcctctctctccactttccagcagatgtggatcagcaag
caagagtacgatgagtctggcccttccatcgtccatcgcaagtgcttctag
DBGET
integrated database retrieval system