Cuculus canorus (common cuckoo): 104066954
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Entry
104066954 CDS
T08597
Symbol
TNFRSF11A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
104066954 (TNFRSF11A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cuca04050
]
104066954 (TNFRSF11A)
04090 CD molecules [BR:
cuca04090
]
104066954 (TNFRSF11A)
Cytokine receptors [BR:
cuca04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
104066954 (TNFRSF11A)
CD molecules [BR:
cuca04090
]
Proteins
104066954 (TNFRSF11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
AI-2E_transport
Tetraspanin
Orf78
COX2_TM
DUF3671
ISK_Channel
TMEM154
DUF6377
Motif
Other DBs
NCBI-GeneID:
104066954
NCBI-ProteinID:
XP_053916179
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All DBs
Position
2:87240249..87270891
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AA seq
657 aa
AA seq
DB search
MPIPSGCWLLLLCLAAAGKQLSLQIAPPCESEQHYEYSGRCCTKCEPGKYMSARCTGTSD
SVCQPCGPNEYMDVWNEEDKCLLHKICDQGKALREVNPGNSTFQRQCACTMGYHWNEDCD
CCQRNTICLPGFGVEHPVQQDKDTMCTPCPRGYFSKVASSTNKCKPWTNCTVLGMAEIVP
GTDKSDAVCAERKTPEPSEDGTNRILYVLIVILFFVALFVIVIFIIYYKNKGKKLTADLQ
NWANEVCSQIKGTKEPPRDVNTTNAAVPQPSEGMCLLGPAGSPASGNLCCTSSHASCRNG
SPSMALCKAGGNLQEFFVETETDEDHFPPIPMEDEYTDKDLNAIDDLSSLSRTASKTVSS
FSEPLEAGENDSLNQYFSGTVSTEDISVSQGSYPSPDRDGALAATDKLLQKSCHCAHSCL
RETGNKDTDHFAKNYCSEKICVRCGVAYRESPRKWSKPCCAAADSASNSPETGSYAQCTC
GLNFLSAGQSSLANDHSMEDTSSDSTNMKYQNTTRSTSGTKSSTSDLPPASGNVTGNSNS
TFISSGQVMNFKGDIIVVYLSQNSQEGTTASGPSEENVGSPVQEENLNRCETFAGNTQHY
KEKCAELQGACPAMQSGGPRWTTGLVTQEWGPSCCGQASQPVQEEGKLGHFSEKVLN
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcccgtcaggctgctggctccttctcctttgcctcgctgctgctggcaaacag
ttgtcactacaaattgccccaccgtgtgaaagcgaacaacactatgaatactccggccgg
tgctgcacaaagtgtgagccaggaaaatatatgtctgctagatgcactggtacttctgat
agtgtgtgccagccatgtggcccaaacgagtatatggatgtctggaatgaagaagacaaa
tgtttactgcataaaatatgtgaccaagggaaagctttgagagaagtgaacccagggaac
agcacgtttcagcgccagtgtgcttgtacaatgggctaccactggaatgaagactgtgac
tgctgtcagaggaatactatatgtcttccaggatttggagtcgagcatcctgtgcaacaa
gacaaggacacaatgtgtacaccatgtcccagaggctacttctcaaaggtcgcttcatcc
accaacaagtgtaaaccctggaccaactgtacagttctaggaatggcagaaattgtgcct
ggcactgacaagtcagatgcagtttgtgcagaacggaagacacctgagccatcggaagac
ggaacaaacaggatcttatacgtgttgattgttatcttgttttttgtggcactatttgtc
attgtcatcttcatcatatactacaagaataagggaaaaaaactgacagcagatctacag
aattgggctaatgaagtgtgcagccaaataaaaggaacaaaggagcctccaagggatgtg
aacaccacaaatgctgctgtcccccagccctctgaaggcatgtgtctcctgggccctgct
ggttctcctgcctctggaaacttgtgctgcaccagcagtcatgcttcttgcaggaatggg
agccccagcatggcactgtgcaaagcaggagggaatcttcaagagttttttgtggaaact
gagactgatgaggaccatttcccaccaattcccatggaagatgaatacaccgataaagat
ctcaatgcaattgatgatttatcatcactgagtcgaactgccagtaaaactgtgtcatca
ttttcagaaccattggaggcaggggagaacgatagcttaaatcagtacttttcagggact
gtgagcacagaggacatatcagtctctcaaggctcttacccttcccctgacagggatggg
gcacttgctgccacggacaaacttcttcagaaatcttgccattgtgcacatagttgcctg
agggaaacaggtaacaaagacacagatcattttgcaaaaaactattgctcagagaagatc
tgtgtgaggtgtggggttgcatacagggagtctcccagaaagtggagcaaaccctgttgt
gctgcagctgacagtgcctcaaactccccagaaactggatcctatgcacagtgcacctgt
ggcttgaattttctctctgcgggtcagagcagtctagcaaatgatcatagtatggaagat
acatcttcagatagtaccaacatgaaatatcagaacacaaccagaagtacttcagggaca
aagagcagcacttcagacctccctccagcatctggaaatgtgactggaaacagtaactcc
acctttatctcaagtggacaagtaatgaatttcaagggtgatatcattgttgtctacctt
agccaaaactcccaggaggggacaacagcctcagggccaagcgaggagaacgtaggcagc
cctgtgcaggaggaaaatctcaaccgctgtgagacttttgctggcaacacccagcactac
aaggagaagtgtgctgagctgcagggcgcctgcccggcaatgcagagtggggggccacgg
tggaccaccggactcgtgacccaggagtggggaccatcctgctgtggccaagcctcacag
cccgtgcaggaggaggggaagctgggacacttctcagagaaagtgttgaactga
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