Cuculus canorus (common cuckoo): 104067960
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Entry
104067960 CDS
T08597
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04060
Cytokine-cytokine receptor interaction
cuca04672
Intestinal immune network for IgA production
cuca04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
104067960 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104067960 (CXCL12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
104067960 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cuca04052
]
104067960 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
cuca00536
]
104067960 (CXCL12)
Cytokines and neuropeptides [BR:
cuca04052
]
Cytokines
Chemokines
104067960 (CXCL12)
Glycosaminoglycan binding proteins [BR:
cuca00536
]
Heparan sulfate / Heparin
Chemokines
104067960 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
104067960
NCBI-ProteinID:
XP_053927735
LinkDB
All DBs
Position
7:18490285..18504154
Genome browser
AA seq
131 aa
AA seq
DB search
MDLRALALLAFALAVISLSEEKPVSLTYRCPCRFYESNVARANIKHLKILSTPNCSLQIV
ARLKSNSKQVCIDPKLKWIQEYLEKALNKPRHRTHKKKQQKKRGPRCPSRATPLKSPGRK
NGGSRCKRQAL
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggacctccgagccctggctctgctcgccttcgctctggccgtcatctccctctcggag
gagaaacccgtcagcctgacttaccgatgcccctgtcgattctacgagagcaacgtggca
agagccaacattaagcatctcaaaatcctctccacacccaactgctcacttcagattgtt
gcaaggctcaagagcaacagcaagcaagtgtgcattgatcccaagttaaagtggatccag
gaatatctggagaaagctttaaacaaaccacgtcatcgcactcataaaaaaaagcaacag
aagaaacggggcccacgctgcccttcccgtgcaacaccactaaagtctccagggagaaag
aatggaggttcaagatgtaagaggcaagcattgtaa
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