Cheilinus undulatus (humphead wrasse): 121505365
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Entry
121505365 CDS
T07473
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04115
p53 signaling pathway
cud04210
Apoptosis
cud05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121505365 (apaf1)
04115 p53 signaling pathway
121505365 (apaf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121505365 (apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
APAF1_C
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WHD_APAF1
Beta-prop_WDR90_POC16_2nd
NB-ARC
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
CARD
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Ge1_WD40
RMC1_N
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_ACSF4
eIF2A
Beta-prop_HPS5
CARD_2
WD40_like
PROPPIN
Beta-prop_SPT8
WD40_RFWD3
AAA_16
AAA_22
WDR54
WHD_Dark
nSTAND1
AAA_18
Motif
Other DBs
NCBI-GeneID:
121505365
NCBI-ProteinID:
XP_041636555
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Position
LG23
Genome browser
AA seq
1258 aa
AA seq
DB search
MALEERARSSLLRFRHRLEQDIKPSYLMDHMISDDVLTVDEEEKIRIKPNRKDQAAALLE
LVLNKDNRAYISFYNALLKEAYDDLASLLHNDLPQTSPEKQSGSCDGFTSYVQTVLSEGG
VPQRPVVFVSRPELVNRVREKLYRLQKEAGWVTVFGMAGSGKSVLAAEAVRHHGLTEDCF
PGGIHWLSIGQLDKPDLLVKIQSLCFRLEQSLDSPSLHRPPNSLDEAKERLRFLMLRKYP
RSLLILDDIWDSTVLKAFDIQCRILLTTRNRSLTDSVSGARYEVEVDRGLDENKGLEVLA
LYTNTKLKGLPEEARSIVKECKGSPLVVSLIGALLKEKPDRWRYYLNQLQKKQFKRIRKS
SSYDYDALDQAMSASIEVLPEEHRELYKDLTVLEKDIKIPAKVLSILWDLETEEVEDILE
EFVNKSLLFVDNNHKPFLYYLHDLQLDFLEEQNRANLESLHSKVVHQYQQHYKDGPPTSG
DEECLYWIRFLTFHMAKANLSQELYSLMFSLDWVSLKSLILGPAHLINDYVEYGPILDKE
NSEVRSQFQEFLSLNGHHLEQRPFPDVLQLALSQPQNSEVYKQALLQAQGQASRGRLYFD
WLNKGSVESLSRLVIQPHQGSIYSACFSHDGTKIASCGASKTLKVFKSMSGEKLTEIQAH
DDEVLCCAFSPDDRLLATCSSDRKVKVWNVEREMLLRVFEEEHEEQVNHCQFTNTTRRLL
LATCSNDKFMNTKLWNLNKPSSQNTMFGHFEPVNHCCFSPDDTFVSTSSNDGTVKLFQVS
SANEWKTINVKDMLAESDEEVLVKCSTWTADGKRIICAARNAALVFDVETSDMLFEIRTN
RLSTVQYCHACPTSSLLAIAFSNYAVELWDLESNKKMADCSGHLSWVQRVHFSPDGSQLL
SCSDDKTVRLWETKKVHTSSAVCLKRDSDVLFNDEDILVSAADNCNRLQVREGRTGSVLF
QSEEMSSRIRSTGLCRQPSAVALGQEDGTVQVLEVPSGKLLATLQGHTKTVLCCRFIQNG
QTLITSSEDTTIRVWRWQTGECKVLQGHKEQVRCFSLLSDSPAETRLLSWSYDGTIKLWD
IESGEKLRDIEAHRGAILSCHVSPDGCFFATTSADNTAKLWHCESWQCVGTLSGHHDCVR
SCRFSWDSRLLATGDDNGEIRLWSVKDLSLLKICSREGKDAMDSLHGGWVTDLHFSSDNS
LLVSTGGYVKWWDVEKGEALQTFYPSGTALKRIHVSADFSTFVTIDNIGILYILQRVV
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggcactggaggaaagggctcggagcagtttgcttcgctttcgccacaggctggagcag
gacatcaagccctcctacctgatggaccacatgatcagtgatgatgtgctgacagtggac
gaggaggaaaagatcaggatcaagcccaacaggaaagatcaggctgctgctctgctggag
ttggtcctgaataaggataatcgtgcctacatctccttctacaacgctctgctcaaggag
gcgtatgatgatttggcaagtctgcttcacaatgacctgccgcagacatcacctgaaaaa
cagagcggctcatgtgatggttttacatcttatgtccagaccgttctaagtgaaggtgga
gtacctcagcggcctgtcgtatttgtcagcagaccagagctggtgaaccgggtcagggag
aaactctacaggctgcagaaggaggccggctgggtcactgtctttggcatggcaggttct
gggaaatctgtcctggctgcagaggctgtcagacaccatggcctcactgaagactgtttc
cctggagggatccactggctgtccattggtcagcttgacaaaccggacttgctggtgaag
attcaatccttgtgtttccgtctggagcagagccttgattcaccatccctccaccgtccc
ccaaactccctcgatgaggccaaggagcgcctacgcttcctcatgctgcgcaaatatccc
agatctctgctgattctcgatgacatctgggacagtaccgtgctaaaagcattcgacatc
caatgccggatccttctgaccaccaggaacagaagccttactgactccgtcagtggggca
agatatgaggtagaagtggaccgtggtctggatgaaaacaaaggactggaggttctggct
ctttacactaacactaaactcaagggacttcctgaagaggctcgcagcatagtcaaagaa
tgcaaaggttcccctcttgtcgtgtccctgattggcgctctcctcaaagagaaacccgac
cgttggcgctactacctcaatcagctccagaagaaacagttcaagaggataaggaagtcc
tcgtcatatgactatgacgccctcgaccaagccatgtcggcgagcatcgaagtcctaccc
gaggagcacagagagctctacaaggacctgaccgtgctagagaaggacatcaaaatccct
gcaaaggttctgtctattctgtgggatttggagactgaggaagtggaggatattctcgag
gagtttgtgaacaagtctctgctctttgtggacaacaatcataaacccttcctgtactac
ctccatgacctccagctggacttcctggaggagcagaatcgcgctaatcttgagagcctt
cactctaaggtggtgcatcagtaccagcagcactacaaagatggtcctcccacatcagga
gatgaggagtgtctctactggatcagattcctcacgttccacatggccaaagccaacctc
tctcaggagctctactcgctcatgttttctctggactgggtcagcctcaagtccctgatt
ctgggtccagctcacctcatcaacgactatgtggagtacggacccatactggacaaagag
aacagtgaagtccgcagtcagttccaggagtttctgtctctgaatggacaccaccttgaa
cagcgcccttttccagatgtgttgcagctcgccctttctcaaccacagaactctgaggtt
tacaaacaggctctgctgcaggcgcagggccaggccagcagggggagactctactttgac
tggctaaataaaggcagtgtcgagagtctgtcccgtctggtgatccagccccaccagggc
tccatctactccgcctgcttctctcatgacggaacaaagattgcctcctgtggagccagc
aagacgctcaaggtgtttaagagcatgtcaggtgagaagctcacagagatccaggctcat
gatgatgaggtactctgctgtgccttctcccctgatgaccgtctcctggcaacctgctct
agtgacagaaaagttaaggtgtggaacgtggagcgagagatgctgctgagagtctttgaa
gaggagcatgaagagcaggtcaaccactgtcagttcaccaacacaacacggcgcctcctg
ctggccacctgctccaatgacaagttcatgaacactaagttgtggaacctcaacaagccg
tcctcccagaacaccatgtttggtcacttcgagccggtcaaccactgctgtttctcccct
gatgacacctttgtgtccacgtcttctaatgatggaaccgtgaagctgttccaggtgtcg
tctgccaacgagtggaagacgataaacgtgaaagacatgctagcagagagcgatgaagag
gtcctcgtcaagtgcagcacctggaccgcggatggcaaacggatcatttgtgcagccagg
aatgctgctctggtgtttgatgtggagacgtcagatatgctgtttgaaatcagaaccaat
cgtctgagcacggtgcagtactgtcacgcctgtcccaccagtagcctgctggccatcgcc
ttttcaaactatgctgtggagctgtgggacttggagtccaataagaagatggcggactgc
agcggtcacctgagttgggtccagcgtgtgcacttctctcctgatggctctcagctgctc
tcctgctctgacgacaagactgtcaggctgtgggagacaaagaaagtgcacacctcctca
gctgtctgcctgaaaagagactctgacgtcctcttcaacgatgaagacatcctcgtgtct
gctgcagacaactgcaacagactgcaggtgcgtgagggcaggactggatcagtgctgttc
cagtcagaggagatgtcgtccaggattcgaagtacaggattgtgcagacagccctctgct
gtggctctgggacaggaagatggaactgtacaggtgttggaggtaccctcagggaagctc
ctggccaccctgcagggccacactaagacggtgctgtgctgcaggttcatccagaatggc
caaacacttatcacatcctcagaggacaccactataagggtgtggaggtggcagactgga
gagtgtaaagtgcttcagggtcacaaggaacaggtcagatgcttctccctgctttcagac
tcacctgctgagaccagactgctgtcctggtcctacgatggcactatcaagttatgggac
atagagagcggcgagaagctgcgtgacatcgaggctcatcgaggagccatcctgtcttgt
catgtctcgccagacggatgcttcttcgccaccacctctgctgacaacaccgctaagttg
tggcactgcgagtcctggcagtgtgtcggcacactgagcggccaccatgactgtgtgcgg
agctgcagattctcctgggacagccgactccttgcaacgggagacgacaacggagagatt
cggctgtggagcgtcaaggacctctctttattgaagatttgctctcgggaaggtaaagac
gccatggactcactgcatggaggctgggtgactgatctgcacttctcctctgacaactct
ctactggtttctacgggaggatacgtcaagtggtgggatgtggagaaaggtgaggcactc
caaaccttttatccatcagggaccgccttgaagaggatccacgtctcggcagacttctcc
actttcgtcaccatcgacaacatcggcatcctctacatcctgcagagggtggtgtga
DBGET
integrated database retrieval system
