Cheilinus undulatus (humphead wrasse): 121508634
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Entry
121508634 CDS
T07473
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03272
Virion - Hepatitis viruses
cud04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121508634 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121508634 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cud04131
]
121508634 (ldlrb)
Membrane trafficking [BR:
cud04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
121508634 (ldlrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
DUF5050
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
121508634
NCBI-ProteinID:
XP_041641555
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Position
4:30551262..30568368
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AA seq
873 aa
AA seq
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MFGMWRRGLPGLSVCCCLLMLIQFAAQADAAFTCSSTQLKCGNGRCITRRWICDGTDDCG
DGTDELPETCATKTCPQSEFNCGAPTNQCIPGSWHCDGKADCRNGADEKNCTAKQCKAGE
FQCANGQCISPSFVCDKDNDCSDGSDEASCPKPTCSSLSFQCNNSVCVPAIWRCDGDADC
ADGSDEWPENCVGQEHVKTSVTCTVREFQCTDGQCIPSSWRCDGDSDCLDRSDEVNCSQP
TCGPDQFQCNDGVCIHGSRQCNGQHDCRDLSDEIGCHIDSVCEGPTKFKCKSGECISMDR
VCDKQRDCRDWSDEPVKECGNNECLTGNGGCSQICDDLKIGYNCSCNSGYRLMADNKTCE
DVDECAVPDTCSQTCINLPGSYKCDCQEGYEIDPASRTCKAESGTVATLFFTNRHEVRKM
TVDRSEYIRLIPQLKNAVALDMDMPNKMIFWSDLSLKKIYSSRLDMAGDSSYHTEVIGSG
TEAPEGIAVDWIHGNIYWTDSNLKTISVATTDGSKRKTLITENLDKPRAITIDPVENFMY
WTDWGERARIERSGLNGADRSTLVSDNIVWPNGITLDMVNQRLYWVDSKLHTLSSIDVNG
GTRRTLIYDQETLGHPLSLTVFEDKVFWTDMTSSAVYSASRLTGNDITKLAMDLIQPEDI
VLYHNLKQPTGKNWCTESNSINGGCEFLCLPAPVINQHSPKFTCACPDNMTMAPDMKKCV
AGSVAPPVEKKTAAPLPSQGPTKPNPPLPTTTVATTKATKKPQSASSSQPPQTTQQPAIT
AQGNKLAGGPEEAPSSHPFALYVVLPLMMLCLVVFGAVLLWRHWRLKNTNTIHFDNPVYQ
KTTEDELHICRNSSEGYVYPQRQMLSMEDMDVA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatgtggaggaggggactccctggactgtcagtatgttgctgtctgctgatg
ctgattcagtttgctgcacaagcagatgccgcgttcacctgcagctccactcagctcaag
tgtggaaatgggaggtgtatcactcgcaggtggatttgtgatgggaccgatgattgtggt
gatgggactgatgagctgccagaaacctgcgctaccaaaacctgtccgcagtcagagttt
aactgtggagctcccacgaaccagtgtataccaggtagctggcactgtgacggcaaggct
gactgcaggaacggggctgacgagaagaactgcaccgccaaacaatgcaaagctggcgag
tttcaatgtgccaatggtcagtgtatatcccccagctttgtctgcgacaaagacaacgac
tgttcggacggttcggatgaagcttcctgtcccaaacccacctgcagctctctctccttc
cagtgcaacaactcagtgtgcgtgccagccatatggcgctgtgacggtgatgctgactgt
gctgatgggtctgatgagtggcctgaaaactgtgtgggacaggaacatgtgaagacctca
gtgacctgtactgtccgtgagttccagtgtacagatgggcagtgtatacccagctcctgg
aggtgtgatggagactcggactgcctcgatcgatcggatgaggtcaactgcagtcagccc
acttgtggaccagatcagttccagtgtaatgatggtgtctgcatccatggcagccgccaa
tgcaacggacagcatgactgcagagacctcagtgatgagatcggctgccacatagatagt
gtatgtgaaggccccaccaagtttaagtgtaaaagtggagagtgtatcagcatggacagg
gtgtgcgacaaacagagagactgcagagactggtctgatgaacctgtcaaagagtgtggc
aacaatgagtgtttgactggaaatggtggctgctcccaaatctgtgatgatctgaagatt
ggctacaactgctcctgcaattctggatacagactgatggcagacaataaaacctgtgaa
gatgtcgatgaatgtgctgtgccggacacttgcagtcagacctgcatcaacctgcctggc
agctacaagtgtgattgtcaggagggctatgagattgaccctgcaagcaggacatgcaag
gctgaatcaggcaccgtggccacactcttcttcaccaatagacatgaagtgaggaagatg
acagttgaccgaagtgagtacatccgtctgattcctcagctgaagaacgcggtggctctg
gacatggacatgcctaacaagatgatcttctggtctgatctttccctgaagaaaatctac
agctccaggttagacatggctggtgattcttcttaccacactgaagtaattggcagtggg
actgaggcaccagaagggattgcagtggattggatccatggcaacatttactggactgac
agcaacttaaagacgatctctgtggcaacaacagatggcagcaagaggaagactctgata
acagagaacctggacaagccaagagccatcacaattgatcctgttgaaaacttcatgtat
tggacagactggggcgagcgggccaggatagagaggagtggcttgaatggagcagatcgc
tctaccttggtgtcagataacattgtgtggccaaatggcatcacccttgatatggttaac
cagcgtctgtactgggtggactctaagttgcacactctatccagcattgatgtgaatgga
gggacacgacgcactctcatttacgaccaggaaacacttggccatcccctgtctctgact
gtgtttgaggataaagtgttttggacagatatgaccagcagtgccgtttatagtgccagc
cgcctgacaggaaatgacatcaccaagctagcaatggacctcatccagccagaagacatt
gtgctgtaccataacctcaagcagccaaccggtaaaaactggtgcacagagagtaacagt
attaatggaggttgtgagtttctgtgccttcctgctcctgtaatcaaccagcactctccc
aaattcacctgtgcctgtcctgacaacatgaccatggcacctgatatgaagaaatgtgtg
gcaggttcagttgccccgccggttgagaaaaaaactgctgcaccactcccgtctcaaggt
ccaaccaagcccaacccgcctctccctaccacaacagttgcgaccaccaaagctaccaaa
aagcctcagagtgcctcatccagccaaccaccacagaccacacagcagcctgccatcact
gctcaaggtaacaaattagccggcggccctgaagaagctccttcatcccacccttttgct
ctctacgtggttttgccattaatgatgctgtgcctggtggtatttggagcagtgttgctg
tggagacactggcgtctgaagaataccaacactattcactttgacaatcctgtgtaccag
aaaaccacagaagacgagctccacatctgcagaaacagctctgagggctacgtttatcct
cagaggcaaatgctgagcatggaggacatggatgttgcatga
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