KEGG   Cheilinus undulatus (humphead wrasse): 121516062
Entry
121516062         CDS       T07473                                 
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud04010  MAPK signaling pathway
cud04020  Calcium signaling pathway
cud04510  Focal adhesion
cud04540  Gap junction
cud04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:cud00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121516062 (pdgfrb)
   04020 Calcium signaling pathway
    121516062 (pdgfrb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121516062 (pdgfrb)
   04540 Gap junction
    121516062 (pdgfrb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121516062 (pdgfrb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:cud01001]
    121516062 (pdgfrb)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:cud04090]
    121516062 (pdgfrb)
Enzymes [BR:cud01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     121516062 (pdgfrb)
Protein kinases [BR:cud01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   121516062 (pdgfrb)
CD molecules [BR:cud04090]
 Proteins
  121516062 (pdgfrb)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 I-set Ig_2 ig V-set Adeno_E3_CR1 C2-set_2 Ig_6 RIFIN VEGFR-1-like_Ig-like Ig_VEGFR-1-like_5th
Other DBs
NCBI-GeneID: 121516062
NCBI-ProteinID: XP_041653057
LinkDB
Position
10:complement(24099776..24144380)
AA seq 1093 aa
MRRVTPSMLQVTVTVTALLYLCAELSCVEITPDEKELVLSRGSSLTLTCSGSGETTWEFK
REDVPFFQLEQSQSYSIEQSSVTSSVLTLWNVSWKHTGVYVCIDRLNWEIKEVSVFVPDP
DVWFINSSHGMVAKTSEESTIPCVVTDPNINVTLYEKDTDVPVKGFYIPSEGYKAPLEDR
TYVCRGEMKGEVKESQAFNVYSIAVPEAIDAYINASKTVLKQGEPLTVNCTVLGVDLLSF
SWYIPNREIEPFTEELSTMVRSCLIFPQTTVAHSGNYICHVHESVQDQTASASINITVLE
QGFVNLRSAQKQNISARLQENVELRVEIEAYPPPQVRWSKDDATIKGDKIIMTRQEQEIK
YVTVLTLVRVRTEQKGLYTAHVTNGDDTKEMTFDLEVRVPSQIKDLTDHHLPGKRHLVTC
VAEGVPTPSIQWYSCDRMLKCSNQTALWQPLKAEPETLSIQTNINYNETRKISQVRSQLT
FLKPQQVTVRCETSNQAGLIDRRDIKLVSSTLFSQVAVLAAVLALVVIIIMSIIILIAVW
RKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMSRDNLVLGRTLGSGAFGRVVE
ATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKHGP
LFLVTEYCRYGDLVDYLHRNKHTFLQYYAEKNQDDGCLISRGSTPLSQRKGYVSFGSESD
GGYMDMSKDEPSLYVPMQEQIDTIKYADIQPSPYESPYQQDIYQEQGGGRLDLVISDSPI
LTYDDMLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDSNY
ISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYNAL
KRGYRMAKPNHASEEVYEIMKKCWDEKFEKRPEFSFLVHTMGSMLTDTYKKRYNQVNDNF
LKSDHPAVARTKPRLTSPFPIANPAFGSPAPVSFPPDSYRQSPGQFRPETDTQEVIPSYN
EYIIPIPDPKPEDVFTDVPSESPVSSMALEEETDSTSQDTAETLPEEDRLEETSERDALL
GSSGTPEVEDSFL
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgaggagggtgactccatccatgctccaggtgacagtcacagttacagctctgctgtat
ctctgcgctgagctgagctgtgtggagatcacaccggatgagaaggagctcgtcctgtcc
cgaggctcctctctcaccctcacctgctccggatcaggggagaccacctgggagttcaag
agggaagacgtgccgttcttccagctggaacagtctcagagctacagcattgaacaaagc
agcgtcacatccagtgtgctgactttgtggaacgtgagctggaagcacacaggggtgtat
gtgtgtatcgatcgactcaactgggaaattaaggaagtttctgtttttgtcccagatcct
gatgtttggttcataaatagctcacacggcatggttgccaaaaccagtgaggaaagcacc
atcccctgtgtggtcactgatcccaacatcaacgtcaccctgtatgagaaggacaccgat
gtgcccgtcaaggggttttacattcccagtgagggttacaaggcaccgctggaggacagg
acctatgtttgtcgaggagagatgaagggagaggtgaaagagtctcaggccttcaacgtc
tacagcatcgctgtcccagaggccattgacgcctacatcaacgcgtcaaagacggtccta
aagcagggcgagccactcacggtaaactgcaccgtgctaggagtggatctgttgtccttt
tcctggtatatccccaacagagagatcgagccatttacagaagagttgtccaccatggtg
cgctcctgcctgatcttccctcagaccactgtggcccacagcggaaactacatctgccat
gttcatgaaagcgtccaagaccagacagcctctgccagcatcaacatcactgtgcttgag
caaggctttgtgaatctgaggtcggctcagaaacaaaacatttcagccagactccaggag
aacgtggaattgagggtagaaattgaggcttaccctccccctcaggtccgctggagcaaa
gacgacgccaccatcaagggagacaaaatcatcatgacaagacaagagcaggagatcaag
tatgtcactgttctcaccttggtgagggtgaggactgagcagaagggcctctacactgcc
cacgtcacaaatggagatgacacaaaagaaatgacttttgacctggaggtccgagttcca
tctcagattaaagacctgacggaccaccacctccctgggaagagacacttggtgacctgt
gttgctgagggggtcccaaccccaagcatacagtggtacagctgtgaccgcatgctcaag
tgtagcaaccagacagcgttgtggcagccgctgaaagccgagccagagacactgagcatc
caaaccaacatcaattacaatgagactcgcaaaatcagccaggttcgaagccagctgacc
ttcctcaagccgcagcaggtgacggtgcgatgtgagaccagcaaccaagccggactcatt
gacaggagagacatcaaactggtgtccagcacattattctcccaggtggcagtgttggct
gctgtactagccttggtggtcatcatcatcatgtccatcatcatccttatcgctgtatgg
aggaagaagcctcgttatgagatcagatggaaagtgattgaatctgtgagccaggacggt
catgagtacatctatgttgaccccatccacctgccctatgacctggcctgggaaatgtct
cgagataacctggtgctgggtcgcactcttggatcaggagcctttggcagagtggtcgag
gcaactgcgtatggtctcactcattcccagtccagtacaaaagtggctgtgaagatgttg
aaatctacagcaaggaggagcgagactcaggctctgatgtcagagctgaagatcatgagt
cacctgggcccccaccttaacatagtcaacctgctgggagcctgcaccaaacatgggcct
ttattcctggtgactgagtactgccgctatggagaccttgtggactacctgcacaggaac
aagcacaccttcctgcagtattatgctgagaagaaccaagacgacggctgcctcatctcc
agaggaagcactccgctcagtcagaggaaaggctatgtgtcatttggaagcgagagcgat
ggaggttacatggacatgagcaaagatgagccctcgctctatgtccccatgcaggagcag
atagataccatcaagtacgctgacatccagccctctccgtacgagtccccttaccagcag
gacatctatcaagaacaaggaggtggcaggctggatctggtcattagcgactctcccatc
ctcacctacgatgacatgctgggtttcagctaccaagtagcgaaggggatggagttcctc
gcctcaaaaaactgtgttcatcgggaccttgctgccaggaatgtgttgatctgtgagggt
aaactggtgaagatctgtgattttggcctggccagagacatcatgcatgactcaaactac
atctctaaaggcagtacctttttgcccctgaagtggatggccccagaaagtattttccac
aatttgtacacaaccctcagtgatgtgtggtcatatggcattcttctttgggagattttt
acacttggaggaaccccctaccctgacttacctatgaatgagttgttctacaacgctttg
aagagaggctatcggatggctaaacccaaccacgcctctgaggaagtatatgagatcatg
aagaaatgctgggatgagaagttcgagaagagaccggagttctcttttctggtgcacact
atggggagcatgctgactgacacctataaaaagagatacaaccaagttaatgacaacttc
ctgaagagtgaccatccagcagtcgcccgcaccaaacccagactcacctcaccctttccc
atcgccaacccagcattcggctccccagctcctgtctcctttcctcctgactcgtaccgc
cagagccctggacaattcagacctgagacagacacacaggaagtcataccttcatacaac
gagtacatcatccccatcccagaccccaaaccagaggacgttttcactgacgtgccttca
gagagccctgtcagctctatggccctggaggaagagacggactccacatcacaggacaca
gctgagactcttccggaggaggaccggctagaagagaccagcgagagagatgctttgctg
ggctcctcagggacgcccgaggtagaagacagcttcctgtag

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