Cheilinus undulatus (humphead wrasse): 121516062
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Entry
121516062 CDS
T07473
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04010
MAPK signaling pathway
cud04020
Calcium signaling pathway
cud04510
Focal adhesion
cud04540
Gap junction
cud04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121516062 (pdgfrb)
04020 Calcium signaling pathway
121516062 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121516062 (pdgfrb)
04540 Gap junction
121516062 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
121516062 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cud01001
]
121516062 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cud04090
]
121516062 (pdgfrb)
Enzymes [BR:
cud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121516062 (pdgfrb)
Protein kinases [BR:
cud01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121516062 (pdgfrb)
CD molecules [BR:
cud04090
]
Proteins
121516062 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
Adeno_E3_CR1
C2-set_2
Ig_6
RIFIN
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
121516062
NCBI-ProteinID:
XP_041653057
LinkDB
All DBs
Position
10:complement(24099776..24144380)
Genome browser
AA seq
1093 aa
AA seq
DB search
MRRVTPSMLQVTVTVTALLYLCAELSCVEITPDEKELVLSRGSSLTLTCSGSGETTWEFK
REDVPFFQLEQSQSYSIEQSSVTSSVLTLWNVSWKHTGVYVCIDRLNWEIKEVSVFVPDP
DVWFINSSHGMVAKTSEESTIPCVVTDPNINVTLYEKDTDVPVKGFYIPSEGYKAPLEDR
TYVCRGEMKGEVKESQAFNVYSIAVPEAIDAYINASKTVLKQGEPLTVNCTVLGVDLLSF
SWYIPNREIEPFTEELSTMVRSCLIFPQTTVAHSGNYICHVHESVQDQTASASINITVLE
QGFVNLRSAQKQNISARLQENVELRVEIEAYPPPQVRWSKDDATIKGDKIIMTRQEQEIK
YVTVLTLVRVRTEQKGLYTAHVTNGDDTKEMTFDLEVRVPSQIKDLTDHHLPGKRHLVTC
VAEGVPTPSIQWYSCDRMLKCSNQTALWQPLKAEPETLSIQTNINYNETRKISQVRSQLT
FLKPQQVTVRCETSNQAGLIDRRDIKLVSSTLFSQVAVLAAVLALVVIIIMSIIILIAVW
RKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMSRDNLVLGRTLGSGAFGRVVE
ATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKHGP
LFLVTEYCRYGDLVDYLHRNKHTFLQYYAEKNQDDGCLISRGSTPLSQRKGYVSFGSESD
GGYMDMSKDEPSLYVPMQEQIDTIKYADIQPSPYESPYQQDIYQEQGGGRLDLVISDSPI
LTYDDMLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDSNY
ISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYNAL
KRGYRMAKPNHASEEVYEIMKKCWDEKFEKRPEFSFLVHTMGSMLTDTYKKRYNQVNDNF
LKSDHPAVARTKPRLTSPFPIANPAFGSPAPVSFPPDSYRQSPGQFRPETDTQEVIPSYN
EYIIPIPDPKPEDVFTDVPSESPVSSMALEEETDSTSQDTAETLPEEDRLEETSERDALL
GSSGTPEVEDSFL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggtgactccatccatgctccaggtgacagtcacagttacagctctgctgtat
ctctgcgctgagctgagctgtgtggagatcacaccggatgagaaggagctcgtcctgtcc
cgaggctcctctctcaccctcacctgctccggatcaggggagaccacctgggagttcaag
agggaagacgtgccgttcttccagctggaacagtctcagagctacagcattgaacaaagc
agcgtcacatccagtgtgctgactttgtggaacgtgagctggaagcacacaggggtgtat
gtgtgtatcgatcgactcaactgggaaattaaggaagtttctgtttttgtcccagatcct
gatgtttggttcataaatagctcacacggcatggttgccaaaaccagtgaggaaagcacc
atcccctgtgtggtcactgatcccaacatcaacgtcaccctgtatgagaaggacaccgat
gtgcccgtcaaggggttttacattcccagtgagggttacaaggcaccgctggaggacagg
acctatgtttgtcgaggagagatgaagggagaggtgaaagagtctcaggccttcaacgtc
tacagcatcgctgtcccagaggccattgacgcctacatcaacgcgtcaaagacggtccta
aagcagggcgagccactcacggtaaactgcaccgtgctaggagtggatctgttgtccttt
tcctggtatatccccaacagagagatcgagccatttacagaagagttgtccaccatggtg
cgctcctgcctgatcttccctcagaccactgtggcccacagcggaaactacatctgccat
gttcatgaaagcgtccaagaccagacagcctctgccagcatcaacatcactgtgcttgag
caaggctttgtgaatctgaggtcggctcagaaacaaaacatttcagccagactccaggag
aacgtggaattgagggtagaaattgaggcttaccctccccctcaggtccgctggagcaaa
gacgacgccaccatcaagggagacaaaatcatcatgacaagacaagagcaggagatcaag
tatgtcactgttctcaccttggtgagggtgaggactgagcagaagggcctctacactgcc
cacgtcacaaatggagatgacacaaaagaaatgacttttgacctggaggtccgagttcca
tctcagattaaagacctgacggaccaccacctccctgggaagagacacttggtgacctgt
gttgctgagggggtcccaaccccaagcatacagtggtacagctgtgaccgcatgctcaag
tgtagcaaccagacagcgttgtggcagccgctgaaagccgagccagagacactgagcatc
caaaccaacatcaattacaatgagactcgcaaaatcagccaggttcgaagccagctgacc
ttcctcaagccgcagcaggtgacggtgcgatgtgagaccagcaaccaagccggactcatt
gacaggagagacatcaaactggtgtccagcacattattctcccaggtggcagtgttggct
gctgtactagccttggtggtcatcatcatcatgtccatcatcatccttatcgctgtatgg
aggaagaagcctcgttatgagatcagatggaaagtgattgaatctgtgagccaggacggt
catgagtacatctatgttgaccccatccacctgccctatgacctggcctgggaaatgtct
cgagataacctggtgctgggtcgcactcttggatcaggagcctttggcagagtggtcgag
gcaactgcgtatggtctcactcattcccagtccagtacaaaagtggctgtgaagatgttg
aaatctacagcaaggaggagcgagactcaggctctgatgtcagagctgaagatcatgagt
cacctgggcccccaccttaacatagtcaacctgctgggagcctgcaccaaacatgggcct
ttattcctggtgactgagtactgccgctatggagaccttgtggactacctgcacaggaac
aagcacaccttcctgcagtattatgctgagaagaaccaagacgacggctgcctcatctcc
agaggaagcactccgctcagtcagaggaaaggctatgtgtcatttggaagcgagagcgat
ggaggttacatggacatgagcaaagatgagccctcgctctatgtccccatgcaggagcag
atagataccatcaagtacgctgacatccagccctctccgtacgagtccccttaccagcag
gacatctatcaagaacaaggaggtggcaggctggatctggtcattagcgactctcccatc
ctcacctacgatgacatgctgggtttcagctaccaagtagcgaaggggatggagttcctc
gcctcaaaaaactgtgttcatcgggaccttgctgccaggaatgtgttgatctgtgagggt
aaactggtgaagatctgtgattttggcctggccagagacatcatgcatgactcaaactac
atctctaaaggcagtacctttttgcccctgaagtggatggccccagaaagtattttccac
aatttgtacacaaccctcagtgatgtgtggtcatatggcattcttctttgggagattttt
acacttggaggaaccccctaccctgacttacctatgaatgagttgttctacaacgctttg
aagagaggctatcggatggctaaacccaaccacgcctctgaggaagtatatgagatcatg
aagaaatgctgggatgagaagttcgagaagagaccggagttctcttttctggtgcacact
atggggagcatgctgactgacacctataaaaagagatacaaccaagttaatgacaacttc
ctgaagagtgaccatccagcagtcgcccgcaccaaacccagactcacctcaccctttccc
atcgccaacccagcattcggctccccagctcctgtctcctttcctcctgactcgtaccgc
cagagccctggacaattcagacctgagacagacacacaggaagtcataccttcatacaac
gagtacatcatccccatcccagaccccaaaccagaggacgttttcactgacgtgccttca
gagagccctgtcagctctatggccctggaggaagagacggactccacatcacaggacaca
gctgagactcttccggaggaggaccggctagaagagaccagcgagagagatgctttgctg
ggctcctcagggacgcccgaggtagaagacagcttcctgtag
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