Curtobacterium sp. SGAir0471: C1N91_04330
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Entry
C1N91_04330 CDS
T05978
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cug
Curtobacterium sp. SGAir0471
Pathway
cug03030
DNA replication
cug03410
Base excision repair
cug03420
Nucleotide excision repair
cug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1N91_04330
03410 Base excision repair
C1N91_04330
03420 Nucleotide excision repair
C1N91_04330
03430 Mismatch repair
C1N91_04330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cug03032
]
C1N91_04330
03400 DNA repair and recombination proteins [BR:
cug03400
]
C1N91_04330
Enzymes [BR:
cug01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
C1N91_04330
DNA replication proteins [BR:
cug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C1N91_04330
DNA repair and recombination proteins [BR:
cug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
C1N91_04330
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N91_04330
MMR (mismatch excision repair)
DNA ligase
C1N91_04330
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C1N91_04330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
HHH
PTCB-BRCT
RNA_lig_T4_1
Nlig-Ia
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QCR44998
LinkDB
All DBs
Position
931528..933837
Genome browser
AA seq
769 aa
AA seq
DB search
MAPADLDAAQAQREVDRLRVRVNELRDQYYEGNGSTVSDGEYDAMVRRLDAIEQRFPDLL
TPDSPTQTVGGQAQTVQFAPVEHAERMLSLDNVFSPEELTEWADKVQRDAGSERVRFLTE
LKIDGLAINLRYEHGRLVSAATRGDGVVGEDVTGNVRTMGTIPDRLSGEGHPAIVEVRGE
IFFPVAQFDELNARQREAGERVFANPRNAAAGSLRQKEEGKSEAKRALMVDRLRRLRMLV
HGIGAWPVRELERDTEVHSQSEVYELLQTWGLPTSSHYRVFDTVDEVLGFVRSTGERRAS
VEHQIDGVVVKVDDLALHEELGSTSRAPRWAIAYKYPPEEVHTKLLDIVVSVGRTGRATP
FAVMQPAEVAGSVVRQATLHNQDVVKAKGVLICDTVVLRKAGDVIPEVLGPVVELRDGSE
REFVMPAACPECGTPLAPAKEGDKDLRCPNARSCPAQVRGRVEHIASRGSLDIEGLGEVA
AAALTQPLHPEQPPLVTEAGLFDLTMEDIVPIEVIVRDAETGMEKSDDDGTPKRVTPFSR
ARKKTDPPFDPDARGAEYTGEPSRYPSKNAFEMLANIEAAKTKPLWRIMVGLSIRHVGPV
AARALANHFGSLDRIRNASREELAAVDGVGGIIADALLDWFAVDWHREIIDRWTAAGVQF
TTPDHPGPGAAVEGGVLSGVTVVATGSLEGYTREGAQEAIIAAGGKAASSVSKKTDFVAA
GPGAGSKLTKAEQLGLRIIDAEQFRLLVTEGPGALGTDQADEAEPSDAD
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ctggccccggccgacctcgacgccgcgcaggcccagcgggaggtcgaccgtctgcgggtc
cgtgtcaacgagctgcgcgaccagtactacgagggcaacggctcgacggtgtcggacggc
gagtacgacgcgatggtgcgtcgcctcgacgcgatcgagcagcgcttcccggacctgctc
accccggacagcccgacgcagaccgtcggcggccaggcccagaccgtgcagttcgcgccg
gtcgagcacgccgagcggatgctcagcctcgacaacgtcttcagccccgaggaactgacc
gagtgggccgacaaggtccagcgcgacgccggttccgaacgggtccgcttcctgaccgag
ctgaagatcgacgggctcgcgatcaacctccggtacgagcacggacggctcgtgtcagcg
gcgacccgcggtgacggcgtcgtgggcgaggacgtcaccggcaacgtgcgcacgatgggg
accatcccggaccggctctccggcgaggggcaccccgcgatcgtcgaggtccgcggggag
atcttcttcccggtcgcgcagttcgacgagctgaacgcccggcagcgcgaggcgggggag
cgggtgttcgcgaacccgcggaacgccgccgccgggtcgctgcgccagaaggaggagggc
aagtccgaggcgaagcgcgcgctcatggtcgaccgcctgcgacgcctccgcatgctcgtg
cacggcatcggcgcctggccggtccgcgagctcgagcgcgacaccgaggtgcactcccag
tccgaggtctacgagctgctgcagacgtggggcctgccgacgagttcgcactaccgggtc
ttcgacaccgtggacgaggtgctcggcttcgtccggtccacgggtgagcgtcgcgcgtcg
gtcgagcaccagatcgacggcgtcgtggtgaaggtcgacgacctggccctgcacgaggag
ctcgggtcgacctcgcgggcaccgcgctgggcgatcgcgtacaagtacccgccggaagag
gtccacacgaagctcctcgacatcgtcgtgagcgtcggccggaccggtcgcgcgacgccg
ttcgccgtgatgcagccggccgaggtggctggctccgtcgtgcgccaggccaccctgcac
aaccaggacgtcgtcaaggcgaagggcgtcctgatctgcgacaccgtggtgctccggaag
gccggcgacgtcatccccgaggtgctcggtccggtcgtcgagctgcgcgacggctccgag
cgcgagttcgtgatgcccgccgcgtgcccggagtgcggcacgcccctcgccccggcgaag
gagggcgacaaggacctccgctgcccgaacgcccggagctgccccgcgcaggtccgcggc
cgggtcgagcacatcgcctcgcgcggctcgctcgacatcgagggcctgggcgaggtcgcc
gccgcggcgctcacccagccgctgcacccggagcagcctccactcgtcaccgaggccggc
ctgttcgacctgacgatggaggacatcgtcccgatcgaggtgatcgtgcgggacgccgag
accggcatggagaagtccgacgacgacggcacaccgaagcgcgtcacgccgttcagccgc
gctcgcaagaagaccgacccgccgttcgaccccgacgcgcgcggcgccgagtacaccggg
gagccgagccgctacccctcgaagaacgcgttcgagatgctcgcgaacatcgaggccgcg
aagacgaagcccctctggcgcatcatggtcgggctgagcatccgacacgtcgggccggtg
gccgcccgggcgctcgcgaaccacttcgggtcgctcgaccggatccggaacgcctcgcgc
gaggagctcgcggccgtcgacggcgtgggcgggatcatcgccgacgcactgctcgactgg
ttcgccgtcgactggcaccgcgagatcatcgaccgctggaccgcggccggcgtgcagttc
accacaccggaccacccgggtcccggtgccgccgtcgaagggggcgtcctcagcggggtc
acggtcgtggccaccggctcgctcgagggctacacccgcgagggcgcgcaggaggcgatc
atcgccgccggcggcaaggccgcctcgagcgtcagcaagaagacggacttcgtcgcagcg
gggcccggtgcggggtcgaagctcaccaaggccgagcagctcgggctgcggatcatcgac
gccgagcagttccgtctgctcgtgaccgagggccccggtgcactcgggacggaccaggcc
gacgaggcggagccgtcggacgcggactga
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