Corynebacterium ulcerans 210932: Cul210932_0958
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Entry
Cul210932_0958 CDS
T03406
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cun
Corynebacterium ulcerans 210932
Pathway
cun03030
DNA replication
cun03410
Base excision repair
cun03420
Nucleotide excision repair
cun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cul210932_0958 (ligA)
03410 Base excision repair
Cul210932_0958 (ligA)
03420 Nucleotide excision repair
Cul210932_0958 (ligA)
03430 Mismatch repair
Cul210932_0958 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cun03032
]
Cul210932_0958 (ligA)
03400 DNA repair and recombination proteins [BR:
cun03400
]
Cul210932_0958 (ligA)
Enzymes [BR:
cun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Cul210932_0958 (ligA)
DNA replication proteins [BR:
cun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cul210932_0958 (ligA)
DNA repair and recombination proteins [BR:
cun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Cul210932_0958 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul210932_0958 (ligA)
MMR (mismatch excision repair)
DNA ligase
Cul210932_0958 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cul210932_0958 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AIT88913
LinkDB
All DBs
Position
987960..990059
Genome browser
AA seq
699 aa
AA seq
DB search
MKGSVWGQKPLKLSTNDKLASVTDSNIELRRQWDELAEQVRYHRDAYYNGTPEISDQEFD
ALFQALQRLEAEHPELAVPDSPTLEVGAPVALGSSFNNVEHLERLMSLDNVFDAAELSDW
LQRTPAQSYLTELKIDGLSLDLIYREGKLWRAATRGDGRIGEDVTENAKVIADVPHLLSE
SAEFPVPELLEVRGEVFIAVEDFAAVNEQRQLEGGKPFANPRNAAAGSLRQKDVEAVKKR
RLRMICHGLGATKGFTPASQYHAYEALAAWGLPVSPYTELVHSAAEVQEKVLYWAEHRHD
AAHEMDGVVVKVDSISEQRALGATARAPRWAIAYKYPPEEVTTELLDIQVGVGRTGRVTP
FAVMRPVFVAGSTVSMATLHNQTEVKRKGVLIGDTVVIRKAGEVIPEVLGPVVEKRDGTE
REFIFPTLCPTCGTRLAPQKEDDADWRCPNSQSCPAQLSTRLTYLAGRGAFDIEALGEKA
AEDLIRTGVLIDEAGLFNLTEEDLLKTRVYTTKKKTLNATGAKLLANLEQSKKADLWRVL
VALSIRHVGPTAARALAARYHSMDALRAASAEEIADTEGVGAIIAQSFKDWFELDWHVHI
VEQWALAGVTMAEETSQLPEQTLAGMTVVVTGSLEGFSRDSAKEAIISRGGKASTSVSKK
TDYVVVGENAGSKETKARELGLTILDEAGFIQLLENGSA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcagcgtatggggtcagaagccgctgaagctaagcaccaacgataaactagct
agcgtgactgattccaatatcgaactccgcagacaatgggacgaactcgccgaacaagtg
cggtatcaccgtgatgcgtactacaacggcacacctgagatcagtgaccaagaatttgat
gcactgtttcaggcactccaaaggcttgaagcagaacatcccgagctcgcagttccagat
agccctactctagaagtcggagcgcctgtggctttgggctctagttttaataacgtagag
cacctagaacgcctcatgagcttggataacgtgtttgatgctgcggagctttccgactgg
ctccaaagaacaccagctcagtcgtaccttaccgagctaaagatcgacggactctcgctg
gatctcatctaccgcgaggggaaattatggcgtgcggctacccggggcgacggccggata
ggcgaagacgtcacggaaaacgcaaaagtgattgcggatgtaccgcacctgcttagtgaa
agcgcagagttccctgttcccgagctcttggaagttcgaggcgaagtcttcatcgccgta
gaagactttgcagcagttaacgagcaacgccaattagaggggggaaaaccctttgctaat
ccgcgaaatgctgctgccgggtcattgagacaaaaagacgttgaggctgttaaaaagcgc
cgacttcggatgatctgtcatgggcttggcgctaccaaaggctttaccccagcgtcgcag
tatcatgcgtacgaggcgttggcggcgtggggattgcctgtgtctccctataccgagctg
gttcactcggcagcagaggtacaggaaaaggttctttattgggcggaacaccgtcacgac
gcagcacatgagatggacggtgttgtagtcaaagtagatagcatctcagagcagcgggca
ttgggtgctacagctagagcccctcgctgggctatcgcctacaaatatccgccagaagaa
gtcaccacggagcttttagacattcaggtgggagtaggaaggaccgggcgtgtcacacct
ttcgctgttatgcgtcccgtctttgttgccggatccactgtgtccatggcaacgctgcac
aaccaaacggaagtaaaacgtaaaggggtgctcataggagacaccgtggtgatccgcaaa
gccggtgaggtgatcccagaagtccttggaccggtagtggaaaagcgagacgggactgaa
cgtgagtttattttccccacgttgtgccctacctgcggtacccggcttgctccccaaaaa
gaggatgatgcggactggcgctgccccaattctcagtcatgcccggctcagctcagcaca
cgtctaacctatctcgcagggcgtggtgcctttgatattgaggctttgggagaaaaagcg
gcggaggatcttatccggacgggcgtgcttatcgacgaagccgggttgtttaatctcaca
gaagaagaccttctcaagacccgtgtgtacacaacaaagaaaaagacactaaatgctaca
ggggccaagctgctggccaacttagaacaatcgaaaaaagctgacctttggcgggttctc
gttgcactatccattaggcacgttggtcccaccgccgctcgagctctggctgcccgctat
cattctatggacgcattgcgcgcagccagcgcggaagaaatcgccgatactgaaggcgta
ggggccatcattgcacaaagcttcaaggattggttcgagcttgattggcacgtccacatc
gtagaacagtgggctctcgccggcgtgactatggccgaagagacctctcaactaccggaa
cagacattggcaggcatgactgttgttgttactggttctttggaaggatttagccgcgac
tctgctaaagaagccattattagccgtggcggtaaggcatccacatcggtttctaaaaaa
actgactatgttgttgtcggagaaaacgctggttctaaggaaaccaaagcgcgagaactc
ggactcaccattctcgatgaagctggctttatccaactactagaaaacgggtcggcataa
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