Corynebacterium urogenitale: CUROG_06630
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Entry
CUROG_06630 CDS
T07467
Symbol
ligA2
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cuo
Corynebacterium urogenitale
Pathway
cuo03030
DNA replication
cuo03410
Base excision repair
cuo03420
Nucleotide excision repair
cuo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUROG_06630 (ligA2)
03410 Base excision repair
CUROG_06630 (ligA2)
03420 Nucleotide excision repair
CUROG_06630 (ligA2)
03430 Mismatch repair
CUROG_06630 (ligA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuo03032
]
CUROG_06630 (ligA2)
03400 DNA repair and recombination proteins [BR:
cuo03400
]
CUROG_06630 (ligA2)
Enzymes [BR:
cuo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CUROG_06630 (ligA2)
DNA replication proteins [BR:
cuo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CUROG_06630 (ligA2)
DNA repair and recombination proteins [BR:
cuo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CUROG_06630 (ligA2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUROG_06630 (ligA2)
MMR (mismatch excision repair)
DNA ligase
CUROG_06630 (ligA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CUROG_06630 (ligA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
Nlig-Ia
HHH
BRCT_2
GASH
Motif
Other DBs
NCBI-ProteinID:
QFQ02682
UniProt:
A0A5J6Z907
LinkDB
All DBs
Position
1508841..1510997
Genome browser
AA seq
718 aa
AA seq
DB search
MSVTSADNTEGSTTATDPATRWQELVDEVRHHRQAYYYGNAEISDADFDALLSELQQLEA
EHPEVVTETSPTTEVAPAPPESSPFRNVDHRERMLSLDNVFDGGQLQGWLERTPAETYLT
ELKIDGASINLLYVNGTLELALTRGDGTTGEDITHNARTLDDIPDELHGTEEFPVPELVE
IRGEVFITVEDFATMNAQRQAAGEKLFANPRNAAAGAMRQKNAEDTAKRPLRLICHGIGA
REGFEVTSQHKAYRALEAWGLPVSPYTKQVHSAEEVVKQVEYWGNHRHDAAHEMDGLVIK
VDSLDEQLALGTTSRAPKWAIAYKYPPEEAMTRLRNIRIGIGRTGRATPYAVMEPKYVAG
STVSMATLHNPTEAHRKGIRLGDTIMIRKAGEVIPEVLGPVEDKRSGSEREYLYSTLCPE
CGTLLAPTKEDDADWRCPNTRFCPGQLHTRLSYLAGRGAFDIDALGEKAAYDLISSGVLA
DESGLFALTSEDLERTTAYTSQTTAAERKKDPTRLRKLNKAGRTLIEKLEEAKHVDLWRV
LVALSIRHAGPTAAKALAKHFGSVKAIRAASVEEMSEIDGVGTIIAQSVADWFTVDWHVD
IVDAWAAAGVRMEAPEPDATSASDASNGESGVGVDATLLEGLTIVVTGTLENYDRTGAKE
AIEDRGGKAAGSVSKKTDFLVAGEKAGSKLTKATDLGVPVLDEGGFEKLLAEGPDTVS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgactagcgcagacaacaccgaaggcagcacgaccgcgaccgacccggccacc
cgctggcaggaactggtcgacgaggtccgccaccaccgccaggcgtactactacggcaac
gcggagatctccgacgcggacttcgatgcgctcctgagcgaactgcagcaactcgaggcc
gagcaccccgaggtcgtaaccgagaccagcccaacgacagaggtcgccccagccccgccc
gagtcatcgccattccgcaacgtggaccaccgcgaacggatgctgagcctcgacaacgtc
ttcgacggcggacagctgcaaggctggctggaacgcacgccggcagagacttacctcacc
gaactgaaaatcgacggtgcctccatcaacctgctatacgtcaatggcacattggagttg
gcgctcacccgaggcgatggcaccaccggcgaagacatcacgcacaacgcccgcaccctc
gacgatatccccgacgaactacacggtaccgaggaattcccagtaccagagctcgtggaa
atccgcggcgaggtgttcattaccgtcgaggacttcgccacaatgaacgcccagcgtcaa
gctgccggcgaaaagctcttcgccaacccccgcaacgctgcggccggtgcgatgcgccag
aaaaatgccgaagacacagccaagcgccccctgcgcttgatctgccacggcatcggcgcc
cgcgagggtttcgaggtcaccagccagcacaaggcctaccgagcactcgaagcctgggga
ctgccggtcagcccgtacaccaagcaagtgcacagcgccgaggaggtcgtgaagcaggtc
gagtactggggtaaccaccgccacgacgccgcccacgagatggacggactagtcattaag
gtcgacagtctcgatgagcagctagccctaggcacaaccagtcgcgcgccgaaatgggcc
attgcctacaagtatccccccgaggaggccatgacccgtttgcgcaacattcgcatcgga
attggccgcaccggccgcgccaccccatatgctgtgatggagcccaaatacgtcgccgga
tccaccgtgtccatggccaccctccacaaccccacggaggcgcaccgcaagggcatccgc
cttggcgatacgatcatgatccgcaaggccggtgaagtgatcccagaggtcttgggcccc
gtcgaggacaaacgcagcggttccgagcgcgaatacctttactccacgctctgcccagag
tgcggcaccctgctggcaccgacgaaggaggacgacgccgactggcgctgccccaacacc
cgcttctgtcccggccaactgcacacccgactcagttacctcgcaggacgtggcgccttc
gacatcgatgctctgggtgagaaggcagcctacgacctcatcagctccggagttttggca
gacgagtctgggttgttcgcgctgacgtcggaggatttggaacgcacaaccgcatacacg
tcacagacgaccgcggcggagcggaagaaggacccaactcgcctgcgtaagctcaacaaa
gcggggcgcacgctaatcgagaagctggaagaagctaagcacgtcgatttgtggcgggtt
ctcgtcgcattgtccatccgccatgcgggaccgaccgcggctaaggcgttggccaagcac
ttcgggtccgtgaaggctatccgtgcggcgagcgtggaagaaatgtctgagatcgacggt
gtgggtaccatcatcgcccaatccgtcgccgactggttcaccgtcgattggcacgtggac
atcgtggacgcttgggccgccgccggagtgcggatggaggctcctgagcccgacgccacc
agtgcgtcagatgcaagcaacggtgagtccggagtaggtgttgatgcgacgttgctggag
gggctgacgatcgtcgtcaccggcaccttggagaattacgaccgcacgggggccaaggag
gccatcgaggatcggggcggcaaggccgcaggaagtgtgtcgaagaagacggacttcctc
gtcgctggtgaaaaagctggctccaagctgacgaaggcgaccgatttgggcgtaccggtg
ctggatgaggggggcttcgagaagctgctggcggagggcccggatacagtgagctag
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