Corynebacterium urealyticum DSM 7109: cu0730
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Entry
cu0730 CDS
T00685
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cur
Corynebacterium urealyticum DSM 7109
Pathway
cur03030
DNA replication
cur03410
Base excision repair
cur03420
Nucleotide excision repair
cur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
cu0730
03410 Base excision repair
cu0730
03420 Nucleotide excision repair
cu0730
03430 Mismatch repair
cu0730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cur03032
]
cu0730
03400 DNA repair and recombination proteins [BR:
cur03400
]
cu0730
Enzymes [BR:
cur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
cu0730
DNA replication proteins [BR:
cur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
cu0730
DNA repair and recombination proteins [BR:
cur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
cu0730
NER (nucleotide excision repair)
GGR (global genome repair) factors
cu0730
MMR (mismatch excision repair)
DNA ligase
cu0730
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
cu0730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
BRCT_2
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CAQ04690
UniProt:
B1VG01
LinkDB
All DBs
Position
complement(869899..872037)
Genome browser
AA seq
712 aa
AA seq
DB search
MSTQYDSDSSPAASNSGSADPALAELAQQWQSLADQVRHHREVYYYGNPEISDAEFDALL
TRLQEFENSHPEAVTGPSPTTEVAPSPPESSPFRNVDHQEPMLSLDNVFDTEQLSSWLDR
TPAKTYLTELKIDGASINLLYRNGVLELALTRGDGTTGEDITHNARTLSDIPARLQPSED
FPVPEIVEIRGEVFIRVEDFAKMNAQRQAEGQKMFANPRNAAAGAMRQKDPAETARRPLR
LICHGIGAREGFTPASQHAAYEALAAWGLPVSPYTKQVHSAKEVLEQVAYWADHRHDADH
EMDGLVIKVDDTESQQRLGTTSRAPRWAIAYKYPPEEARTRLHDIRLGIGRTGRATPYAV
MEPKYVAGSTVTMATLHNPSEAHRKGVRLGDEIMIRKAGEVIPEVLGPVEDARNGAEREF
LFSSLCPECGTPLAPARGDDADWRCPNTRYCPGQLHTRLTYIAGRGAFDIDALGEKAAYD
LIHSGVLPDETGLFSLTEEDLRRTDAYTTKSGALNKQGETLLTTLAAAKEVDLWRVIVAL
SIRHVGPTAAKALANHYGSIPDVAAADVETMSTVDGVGPIIAESVRDWFAVSWHQEIVDA
WAAAGVRMEQDVTEQPSADAAGSIQADLLAGLSIVVTGTLEDFDRSSAKEAIESRGGKAT
GSVSKKTDYLVAGAKAGSKLTKAEELGIPVLDEAGFHKLLSEGPGKGDAEED
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactcaatacgattccgattcctcgcccgccgcaagcaattccgggtccgccgac
ccggcccttgctgagctggcccagcagtggcagtccctcgcggaccaggtcaggcaccac
cgcgaggtgtactactacggcaatccggagatctccgacgccgagttcgacgccctgctc
acccgcctgcaggagttcgagaactcccaccccgaggcggtgaccggccctagccccacc
accgaggttgccccctcccctccggagtccagcccgtttcgcaacgtggaccaccaggag
ccgatgctctcgctggataatgtcttcgacaccgagcagctgagctcctggctggatcgc
accccggccaagacctacctcaccgagctgaagatcgacggcgcgtcgatcaacctgctt
taccgcaacggtgtcctggaactcgcgctcacccgcggcgacggcacgaccggcgaggac
atcacccacaatgcccgtaccctctccgatatcccggcgcgcctgcaaccttccgaggac
ttcccagtgccggagatcgtggagatccgcggcgaggtgttcatccgcgtcgaggacttc
gcgaagatgaacgcccagcgccaggcggaggggcagaaaatgtttgcgaatccgcgcaat
gccgcggccggcgcgatgcgccagaaagacccggcggagaccgcacgccgcccgctgcgc
ctgatctgtcacggcatcggtgcccgcgagggcttcacccccgcttcccagcacgcggcc
tacgaggcgctggcagcctggggcctgccggtgagcccgtataccaaacaggtgcacagc
gccaaggaggtcctggaacaggtcgcctactgggcggaccaccgccacgatgcggatcac
gagatggacggcctcgtcatcaaggtcgacgacacggagtcccagcagcggctcggaaca
accagccgcgccccgcgctgggcgatcgcctataagtatccgccggaagaggcccgcacc
cggctgcacgacatccgcctagggatcgggcgcaccggccgggcgaccccgtatgcggtg
atggagccgaagtacgtcgcgggctccaccgtgaccatggcgaccttgcacaatccttcc
gaggcccaccgcaagggcgtgcgcctgggtgatgagatcatgatccgcaaggccggggag
gtcatcccggaggtgctgggcccggtggaggacgcccgaaatggtgcggagcgcgagttc
ctcttcagcagcctgtgcccggagtgcggcactcccctggccccggcccgcggagacgat
gcggactggcgctgcccgaatacccgctactgccccggccagctgcacacccgcctgacc
tacatcgccggccgcggggccttcgatatcgacgcgctcggcgagaaggccgcctatgac
ctcatccattccggcgtgctacccgacgagacggggctgttctcgttgacggaggaggat
ctgcgccgcacggacgcgtatacgacgaagtccggcgcgctgaataagcagggcgagacg
ttgttgacgacgctcgcggcggccaaggaggtcgatctgtggcgcgtcatcgtcgccctg
tccatccggcacgtcggaccgacagcggcgaaggccctggccaatcactacggttccatt
ccggacgtcgccgccgccgatgtggagacgatgtccaccgtcgacggggtggggcccatc
atcgccgaatccgtccgcgactggtttgcggtctcctggcaccaggagatcgtcgatgcc
tgggcggccgccggggtgcggatggagcaggacgtcaccgagcagccttctgccgacgcg
gccgggtccattcaggccgaccttctggccgggttgagcatcgttgtcacgggcacgctg
gaggacttcgaccgcagcagcgcgaaggaggccatcgagtcccgcggtgggaaggcgacc
ggcagcgtgtccaagaagacggactatctggtcgccggggccaaggccggctcgaagctc
acgaaggccgaggagctgggcatcccggtgctcgacgaagccgggttccacaagctgctg
agcgaggggccaggcaagggagacgccgaggaggactag
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