Corynebacterium uterequi: CUTER_04595
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Entry
CUTER_04595 CDS
T03957
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cut
Corynebacterium uterequi
Pathway
cut03030
DNA replication
cut03410
Base excision repair
cut03420
Nucleotide excision repair
cut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUTER_04595 (ligA)
03410 Base excision repair
CUTER_04595 (ligA)
03420 Nucleotide excision repair
CUTER_04595 (ligA)
03430 Mismatch repair
CUTER_04595 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cut03032
]
CUTER_04595 (ligA)
03400 DNA repair and recombination proteins [BR:
cut03400
]
CUTER_04595 (ligA)
Enzymes [BR:
cut01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CUTER_04595 (ligA)
DNA replication proteins [BR:
cut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CUTER_04595 (ligA)
DNA repair and recombination proteins [BR:
cut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CUTER_04595 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUTER_04595 (ligA)
MMR (mismatch excision repair)
DNA ligase
CUTER_04595 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CUTER_04595 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
NHase_beta_N
HHH
Motif
Other DBs
NCBI-ProteinID:
AKK10924
UniProt:
A0A0G3HC98
LinkDB
All DBs
Position
963642..965690
Genome browser
AA seq
682 aa
AA seq
DB search
MTDIRATWERLAEDVRRHRAAYYAGEPSIPDADFDILFRQLMDLEAAHPELAVPDSPTQQ
VGAPSPEESTFENVEHLERMMSLDNVFSAEELADWLLRTPAEAYVTELKVDGVSIDLVYR
DGELVRAATRGDGRVGEDITANARVITDIPHRLVGSPPPLLEVRGEVYIRPEDFPGINAQ
RVESGKPAFANPRNTAAGGLRQKSTADVRARKLHFVAHGLGAREGFEATSQHAAYDALAS
FGLPVSPYTELVSTVEDVQRKVAYWADHRHDAEFEMDGVVIKVDDLAAQRGYGATSRAPR
WAIAYKYPPEEVTTKLKDIQVSVGRTGRVTPFAMLEPVFVSGSTVSMATLHNPTEVKRKG
VFIGDTVVVRKAGEIIPEILGPVAELRDGTEVEFVFPAECPSCGATLAPQKEGDADWRCP
NTRSCPAQLSARLEYLAGRGAFDIEALGEKGARDLIAAGVLVDEAGLFDLTEEDLLASSV
YTRRKSAKKEDEGRLVVNEAGRKLLANLEQAKQVELWRVIVALSIRHVGPSAARALATRY
GSLAAARDADVEDLAGTDGVGRVIAESFKHWFDVDWHREIVRRWAAAGVRMEEDSTTRVE
QTLTGLTIVVTGTLEGFTRDGAKEAIVERGGKATGSVSKKTDYVVVGANAGSKEQKARDL
GIPILDEAAFGELLASGAVAGR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacattcgcgctacgtgggaacgcctcgctgaggacgtccgccgccacagagcg
gcctactatgccggcgagcccagcatcccggacgccgacttcgacattctcttccggcag
ctcatggacctggaagccgcccaccctgagctagcagtacctgacagccccacccagcaa
gtgggggcaccgtcgcctgaagagtcgactttcgaaaacgtcgaacacctcgaacgcatg
atgagcctcgacaacgtgttcagcgcagaggagctggccgactggctcctgcgcaccccg
gctgaggcctacgtcaccgagcttaaggtagatggggtctccatcgatctggtctaccgc
gatggtgagctggtccgcgccgccacgcggggcgacggtcgggtcggcgaggacattacc
gccaacgcacgggtcatcaccgacataccgcaccggttggtggggtcaccgccgccattg
ctggaggttcgtggggaggtgtacattcgcccggaggacttcccgggcatcaacgcccag
cgagtggagtcaggtaagccggctttcgccaacccccgcaataccgctgctggaggtctc
cggcagaagtccaccgccgatgtccgagcccgaaaactacactttgttgcgcacggcctc
ggagcccgggaagggtttgaggccaccagtcagcacgccgcctacgacgctctggcgtcc
ttcggccttccggtctcgccgtacacggagctggtatcaaccgtcgaggacgtccaacgc
aaagtagcgtactgggcggatcatcggcacgacgccgaattcgagatggacggggtagtc
atcaaggtcgatgacctggcggcccaacgcggctatggtgcgacgtcacgggctccgcgc
tgggcgattgcctacaagtacccgccggaggaagtgaccaccaagctcaaggacattcag
gtcagcgtcggccgtactggtcgcgtcacgcccttcgccatgctagagccggtgttcgtt
tccggatcgacggtgtccatggccacgcttcataatcccaccgaggtgaagcgaaagggg
gtcttcatcggggacacggtcgtcgtgcgaaaagcgggggagatcatcccggagatcctc
gggccggtggcggagctacgggacggcacggaggtagagttcgtcttccccgctgaatgc
cccagctgtggtgccactttggcgccgcagaaggagggggatgcggattggcgttgcccc
aacacgcgttcgtgtcccgcccagttgtcggcgcggctggagtatctagccggccgcggc
gccttcgacatcgaggccctgggggagaagggtgcccgggacttgatcgctgcaggagtc
cttgtggatgaggcgggcctgttcgatctcacggaggaggatctcctggcctcgtcggtg
tacacgcggcggaagtccgccaagaaagaagacgagggtcggctcgtcgtcaacgaggcc
gggcgcaagcttctcgccaacctggaacaggccaaacaggtggagctatggcgggtcatc
gtcgcattgtcgatccgccacgtgggaccatcggcggcgcgggcgcttgccacacgctat
ggttccctcgccgcggcgcgcgacgccgacgtcgaagacctggcagggaccgacggggtg
gggcgggtgattgccgagagcttcaagcattggttcgacgtcgactggcaccgggaaatc
gttcgccgatgggccgcagcgggggttcggatggaggaagactccacgactcgcgtcgag
cagacgctgacggggctgacgatcgttgtgaccggcaccctggagggcttcacgcgtgac
ggcgcgaaggaagcgatcgtcgaacgcggcggcaaagcaaccggctcggtgtctaagaag
acggattacgtcgtggtgggtgccaacgccggatcgaaggagcagaaggcccgcgacctc
gggatccccattcttgacgaggccgcgttcggagagttactcgctagcggcgcagtagcc
ggccggtaa
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