Congregibacter variabilis: R0135_07185
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Entry
R0135_07185 CDS
T10777
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
cvb Congregibacter variabilis
Pathway
cvb00540
Lipopolysaccharide biosynthesis
cvb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
R0135_07185 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cvb01005
]
R0135_07185 (lpxC)
Enzymes [BR:
cvb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
R0135_07185 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
cvb01005
]
Lipid A
R0135_07185 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
WOJ94946
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All DBs
Position
complement(1636772..1637692)
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AA seq
306 aa
AA seq
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MIRQRTLRNAIKATGVGLHTGEKVYLTLAPAPVDSGIIFRRVDLNPVVEIHAKASNVGDT
TLSTTLVHDGHRVSTVEHLLSAMAGLGIDNAYVDVSASEVPIMDGSAGPFVFLIQSAGIE
EQPAAKKFIRIKRPVTVEDGDKVASFLPFDGFKVSFTIDFDHPVFRDRKAHAEIDFSSTS
FVREISRARTFGFMHEIEYLRSKGLARGGSVDNAIVVDEYRILNQDGLRYEDEFVKHKVL
DAIGDVYLLGYSLIGEFRAHKSGHALNNASLRALIAQTDAWEMVTFDDPDMAPISYVTAP
AAPAAI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgattcgacagcggacgttgcgcaacgccatcaaggcgactggcgtcggtttgcatacc
ggtgaaaaggtatacctgaccctggcgcctgcgccggtagacagcggtattatttttcgc
cgtgtcgatctcaaccctgttgttgagattcacgccaaggcgtctaacgtgggcgacaca
acgttgtcgacaacccttgtgcacgacgggcaccgagtgtctaccgtggaacatttgttg
tcagcgatggcgggtctgggtattgataacgcttatgtagatgtcagtgccagtgaagtg
ccgatcatggatggaagtgccggaccgtttgtttttctgatccagtctgctgggatcgaa
gaacagcctgcggcaaaaaaattcatccgtatcaagcgtccggtgacggtagaggacgga
gacaaggtagccagctttcttccctttgatggcttcaaggtctccttcactatcgatttc
gaccacccggtgtttcgcgatcgtaaagcacacgccgagatcgacttttcctccacatcc
tttgtgcgagagatcagtcgggctcggacttttggctttatgcacgaaatcgaatatctg
cgctccaaggggcttgcccgaggcggcagcgtagacaacgctatcgttgttgatgagtac
cggattttgaaccaggacggactgcgctacgaggatgagttcgtaaaacacaaggttctg
gatgccatcggagacgtctatttgctgggctacagcctgattggcgagtttcgcgcccac
aagtctggccacgccctgaataatgcatcattgcgtgctttgatcgcacagactgacgcc
tgggagatggtgacctttgatgatcccgatatggcgcccatctcctacgtcacggcgccg
gcggcgcctgccgctatttga
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