Cebidichthys violaceus (monkeyface prickleback): 137869041
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Entry
137869041 CDS
T10484
Symbol
kdm2bb
Name
(RefSeq) lysine (K)-specific demethylase 2Bb isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
137869041 (kdm2bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cve03000
]
137869041 (kdm2bb)
04121 Ubiquitin system [BR:
cve04121
]
137869041 (kdm2bb)
03036 Chromosome and associated proteins [BR:
cve03036
]
137869041 (kdm2bb)
Enzymes [BR:
cve01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
137869041 (kdm2bb)
Transcription factors [BR:
cve03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
137869041 (kdm2bb)
Ubiquitin system [BR:
cve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137869041 (kdm2bb)
Chromosome and associated proteins [BR:
cve03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
137869041 (kdm2bb)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
137869041 (kdm2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
DUF7885
JmjC
F-box
Cupin_8
LRR_4
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
137869041
NCBI-ProteinID:
XP_068562235
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MAQAVETCAESGRRLRSICRRMYDENEDLSDVEEIANIRGFSVEEKLVSDSYNAKFVHFM
EGKDFSYEYVQREALRTPLIFKEKDGLGVRMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPDL
KHSQTEATNVISDMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
PHNLALYEDWVLSGKQSDLFLGDRADGCQRVELEQGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIHEIENRTKVNSKFRFPFYYEICWYVLERYLHCLTKRSYFSQEIRKE
PVLMDFETKANTESPNSDSRSQDMNEDSCETQVRDGQSEKPEKASQDGPCSPDNRRGQHL
KAVLSVDSEDSCNPGSTSLEFPQTPSDSPASESPNKWTHLTEFELSGLRTLVEKLELLPE
NKKCVPEGIENPQALLEDMKIVLKEHADDDPKLALTGVPVVYWPKKTIKPRPPNRPKPKM
AASPASAVKLSAGRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIAPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSNG
VVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEPRLNRDSKEEPDPPMLA
TATVTALTTTSAVKRKAEREEIPKRKEEEPPKKRPPLLSLDGTLRPRLEDNPLRKKRKLF
DTHDEPVIVKKKKKLSKPDDPLTPKLLRQIKTENDHGDEEDDQEDHEEDGFPLDRIHLKG
KSEYDDEDQAEDEEGEEEETVKKERDSSTEDKAKVLLSPLLRTSAGRESEQSSNSPRAGP
SSESGEAQERNSAQLKARHQRRRLPNKELSKEFNQEIPKKEDCLSNQNHGSVKTEDGSAN
HNRRPLKNEDSVTNQNRKPLKTEDSTANQSRRALKTEEGLANHNRRPLKTEDSLANQNHR
PVKTEPENEVEDQKPRWPLNNGSSDLGDWLRHRGREVNETPRGYSPLGWNRGMQITPICP
RPLPCRSPPKCIQMERHVIRPPPISPPPDRLQLTDGEAHVMRREMWMSVFGHLTHRDLCV
CMRVCRTWNRWCCDKRLWKHVNLNRCKSITPLMLSGIIRRQPVALDLSWTNISKKQLSWL
INRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPG
QLDNRSKLRNVEDLRLAGLDITDTSLRLIIRYMPSLSKLDLSYCNHVTDQSVNILTAAGT
TTRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVSKEGCDRFIAEMSVSVQF
ELIEEKLLQKIS
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggccgtggaaacgtgtgctgaatccggacgcaggctgcgctccatctgccga
aggatgtacgacgaaaacgaggatttgtccgacgttgaagaaattgcaaacatccgaggt
ttcagtgtggaggaaaagctcgtcagtgacagttacaacgccaaatttgtccacttcatg
gagggtaaagacttctcgtatgaatatgtgcaaagggaggctctcaggaccccactcatt
ttcaaagagaaagatggactcggggtcagaatgcctgatccagaatttacagtcagtgaa
attaaaggcttagttgggagtcgtcggtctgtggatgttatggacgtgagcactcagaaa
ggctctgaaatgagcatggctcagtttgtccgttattatgagacaccagaggaagagcgg
gacaaactcttcaatgtcatcagcttagagttcagccacactaagctggagaacctcatc
aagcggcccacagtggtagatcaagtcgactgggtggacaacatgtggcctcctgatctg
aaacatagccaaacagaagccaccaatgtaatctcagacatgaagtaccctaaagtgcaa
aggtattgtttgatgagtgtgaagggctgctacacagacttccacatcgatttcggtgga
acttctgtttggtatcacgtattcaagggacagaaagtgttttggcttgtgccaccaacc
cctcataaccttgccctttatgaggactgggtcctgtcaggcaagcagagtgatctcttc
ctgggagacagagctgatgggtgccagagagtggagcttgagcaaggatacacgttcttc
atcccatctgggtggattcatgctgtctacactccagaggacaccctggtatttggaggc
aatattctgcacagcttcaacattcctatgcagcttaccatccatgagatagagaatagg
actaaggttaattccaagttccgtttccccttctactatgagatatgctggtatgtcctg
gagagatacctgcactgcctcaccaaacgctcctacttttctcaggagatccgcaaggag
cctgtgctaatggactttgagacaaaggcaaacacagagagccccaactccgactcaagg
agccaggacatgaacgaggactcatgtgagactcaagtcagggatggccagagtgaaaaa
ccagagaaagcttcccaggatggcccctgctctcctgacaaccggaggggccagcacctc
aaagctgttttatctgttgactcggaggacagctgtaatcccggctccacatctctggag
ttccctcaaaccccctctgactctccagcctcggagtctccgaataaatggacgcatttg
accgagtttgaactgagcggactcaggacgctggttgagaagctggagttgctccctgaa
aataagaaatgtgttccagagggaatagagaacccacaagccctgctggaagacatgaag
attgtcttaaaggaacacgctgatgacgaccccaaattagctctcactggagttcctgtg
gtttactggccaaagaaaactataaagccccggcctcccaaccggccgaaacccaagatg
gcagcttctcctgcatcagcagtcaagctgtcagctggtcggggaacatctggtgccagg
aggagaaggacgcgctgtcggaagtgtgaagcatgcctgcggacggagtgtggagagtgc
cacttttgtaaagacatgaagaagtttggtgggccgggccgcatgaaacagtcctgcatc
atgaggcagtgcattgcaccggtcctgccgcacacagcggtgtgtctcgtctgtggagag
gcagggaaagaggacacagtggaggatgaggaggagaagtttaaccttatgctcatggag
tgctccatctgcaatgagattgttcatcctaactgtcttaaggtgaaagattccaacgga
gtagtcaacgatgaactgccgaactgctgggagtgcccaaagtgcaatcatgctgggaaa
acaggaaaacaaaaaagggggccaggttttaagtacgcatcaaaccttcctggttctcta
ctgaaagaaccacggttaaaccgggattcgaaagaggagcctgacccaccgatgttggcc
acagcaactgttactgctttgactaccacatctgctgtgaagagaaaagcggagcgggag
gaaatccctaagaggaaagaggaagagcctccaaagaaacgtcctcccttgctgtctctg
gatggtacgctccgaccaaggctagaggacaacccactacggaagaagaggaagcttttt
gacacccatgatgaacctgtaattgtgaaaaagaagaagaagctttcaaaaccagatgat
cctttgactccgaagctgttgcggcaaatcaagacagaaaatgatcacggcgatgaagaa
gacgaccaggaggatcatgaagaagatggatttcctttggacaggattcatttaaagggg
aaaagtgaatatgatgacgaggaccaagcagaagacgaggagggagaggaagaggagaca
gtgaaaaaagagagagacagcagtacggaagacaaagccaaggtcctgttaagtccactg
ctaagaacatctgcaggcagagagagtgaacaatcctccaactctcccagagctggacca
agcagcgaatcaggagaagcacaggagaggaactccgctcagctaaaggctcgccatcag
cggcgacgcctccccaacaaagagctgagcaaagagttcaaccaggagattcccaagaaa
gaagactgtctctccaaccaaaaccacgggtcagtgaagacggaggacggttcagccaat
cacaatcgacgaccgctgaagaacgaggactctgtgaccaatcagaaccgtaaaccacta
aaaacagaggactcaaccgctaatcagagccgcagggcccttaaaacagaggaaggtttg
gccaatcacaacagacgcccgctgaaaacagaggacagcctggccaatcaaaaccacagg
cctgtaaaaactgagcctgagaacgaagtagaggaccaaaagcctcgatggcctcttaat
aacggcagcagcgacctgggcgactggctgcgacacaggggcagggaggtgaatgagacg
ccgcgtggttactcgccactgggctggaacagaggcatgcagatcacacccatatgcccc
cgtccactcccctgccggtcaccgccaaaatgcatccaaatggagcgtcatgtgatccgg
ccccctcccatcagtcctccgcctgacagactccagctgaccgacggtgaagcgcacgtg
atgcgaagggagatgtggatgtcagtgttcggccacttgactcacagagatctttgtgtg
tgcatgcgtgtctgcaggacctggaacagatggtgctgcgacaagaggctttggaagcac
gtcaatctgaaccgctgcaagtccatcacacctctcatgctgagcggcatcatccggaga
cagccggtagctctggacctcagctggaccaacatctccaaaaaacaactcagctggctc
atcaacagactgccaggtctgcgtgtgctgctgttgtccggatgctcctgggtggcggtc
tctgctctttgcacctccagctgtcctcttctgcgaacgctggatgttcagtgggttgag
ggactgaaagatgcccagatgagggacctgctgtcgcctcctacagataacaggccaggt
cagttggacaacaggagtaaactgcgtaatgtggaggacctgcgcctggcaggcttggac
atcacagacacgtctctgcgcctcatcatacgttacatgccctcgctgtccaagctggac
ctcagctactgcaaccacgtcactgaccagtccgtcaacatcctgactgctgcagggacg
accaccagagactcgctcactgacatcaacctgtcagtgtgtaacagggtcacagaccag
tcgctgacctatttcaagcgctgtggaagcatatgtcatatcgacctgcgatactgcaaa
caggtgagcaaggaaggatgcgaccggttcattgcagaaatgtccgtcagcgtgcagttt
gaactgatagaagagaagctgctgcaaaagatcagttag
DBGET
integrated database retrieval system
