Cebidichthys violaceus (monkeyface prickleback): 137876457
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Entry
137876457 CDS
T10484
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137876457 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cve03019
]
137876457 (smg6)
03032 DNA replication proteins [BR:
cve03032
]
137876457 (smg6)
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137876457 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
137876457 (smg6)
DNA replication proteins [BR:
cve03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
137876457 (smg6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
137876457
NCBI-ProteinID:
XP_068572154
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MANELDRVRISAAELRAVTSNSVDIIDCQNEKQAEHLVNKQHRKCEGKRPELQRYQPVAG
HGRCHRDSEEGETGQSDPLAADSYDHGQPSQSKKRGVSERYGCTDDGADTNITEEDRMRG
DGSNTQNCRKGFHSQPKSEANKEKCFVENDREHQEAAGAAKPTRKARKPDREFYQPGSRR
SIQGKDSGVGTEQDMPPPRQNMQQTEPECQLSSGEREGNKKTSIQKQGGKAKEVKGLLEN
IKSSKSSETNRKHGSRDVEKAPLPSDASVEKITSKVEQLCVKDRGKVGCDSQAVEVLSCG
RGETIDKEWRDQGGGTKEEDEKVEKKRERGNRRRRGGDKEKERNPDSRRTEDEAGGGGRN
NNGKAEKQGDRRAAEAERDTKAGKTGDAQQSKGRENRRESRRGDNNNQSRDAEKDAKIER
NPDRAVERGDRNKSNANIPTPTSKRYSKSDIRRSRNRTYSSSSASSVTSLDGPRLGRDVE
SSKPRLEPVHNNKEGMANSGVGRRSHLQSWTANGESSTEGSEMSDIAEDRRRRRGGGEEL
SAERRREERNRLKGNKGGGRGILQVSLEKTSGTASHSRTSQQHKPVVVPRGRGGGILVLP
ARTDISNSPEVGQRLLFGGIRGGGACRSRGGRGGMRRLWDPNNPDQKPALTSTQSSQHLS
LQQPIYLQTGTGYGQLHFLDTDDEVAGSPPVPQGEHFRTQQAAAMAYYKFQNSDNPYCYP
MSTSNSHSPGTTTNQRYPYPYHMGPYQMAPPNGMYPGPGVGQFGGSYRGAGYSQPAAGGS
LSFEEVEQQARGELGRQLRAADAQELQLSNLLSRDRVSADGLDRMAQLRADLLGLYEQII
LTDIDFSDSQNVDQSLWKNVFYQVIERFRQLLKDPTCDNTPHIRNMLLTLLDEGALFFDG
LLQKLQTVYQFKLEDYMDGMAIRARPLRKTVKYALISAQRCMICQGDIARYREQASDSAN
YGKARSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYYYMRSLAASNPILTAKESLM
SLFEEAKRKEEQLERRRRQEHEGGSRGPAVRGRGRGEDGARVEIWIRTSRQAATPSSQRG
GSESSRDSEQDGDLGSLSASDLNKRFILSFLHAHGKLFTKVGMESFPGVASRVLLEFKTL
LQHGPALLGFTHMLQIITINMFTIHYAHSRGEDGEVRSVLQEQSTALGLGMFALLVQRCT
ELLRDTPAEPVPMADGDEQGKGEEHEGMVRVSAFPLDLRELLPSIKVWSDWMLGQPDQWN
PPPCSIDYSPDVWQCLADLCNMLARVDHEEVPLFKVDTEEVEGDEELTVLQLKEDRLLAG
FIPLLAAPQEPCYTDRHTDMAIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYISVATS
PPTNSTDSRSRQDSLTEKEADDVIVEAESSLSASEGEEEAGDSENDIRQLKARRHDLTNK
LAQQQKRRDKIQAVLQTGGQLELEVRPLFLVPDTNGFIDHLGGLKKLLQCGTYIVVVPLI
VITELDGLAKGQDNFGGGVGSGGRVTGGRGNYNVSAAHVRAVQEKARCAVAFLEKGFEAR
EPYLRALTSRGNQLDSIAFRSEDTSGQQGTNDDVILSCCLHYCKDKAKDFMPDQRNGTVR
LQREVVLLTDDRNLRVKALTRNVPVRDIPAFLSWAKVG
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaactggaccgagtacgaatctcagctgcggaactcagagctgtaacgtcg
aattcagtcgatattattgactgtcagaacgagaagcaggcggagcatctagtaaacaag
cagcacaggaagtgtgaaggaaaacgccctgaactacagcgctaccagccggtagctgga
catggacggtgtcaccgtgacagtgaagagggagaaactggtcaaagtgatcccctggct
gctgattcatatgatcatggtcaaccatcacagagtaagaaaaggggagtctcagagaga
tatgggtgcacagacgacggggcagacaccaacataacggaagaagacaggatgagaggt
gacggtagtaacactcagaactgtagaaagggctttcactctcagcctaaatcagaagca
aataaagagaaatgctttgttgaaaatgacagagaacaccaggaagctgctggagctgct
aagccaacacggaaagcccgcaaacccgaccgagaattttatcaacctgggagccgcagg
agcatccagggaaaggactctggagttggaacggagcaggatatgcctccccccaggcag
aatatgcagcaaactgagccagaatgccagttgagttcaggggaaagggagggtaacaaa
aagacatccattcagaagcagggagggaaagctaaagaagtaaaaggtctactggaaaac
ataaaatcatctaaatccagtgaaacaaacagaaagcatgggagccgtgatgtggaaaaa
gccccattaccttctgatgcttcagtggagaaaattactagcaaagtagaacaactctgt
gtgaaagacaggggtaaagtgggatgtgatagccaagctgttgaagtgttaagttgcggt
agaggggaaacaattgacaaggagtggagagaccaggggggggggacaaaagaggaggat
gaaaaggtagagaagaagagggaaaggggaaaccgcaggagaagaggaggggataaggaa
aaagagaggaatccggattccagaagaacagaagatgaagcaggtggtggtggaaggaac
aacaacgggaaagctgagaagcaaggagacaggagagcagcagaagcagaaagggatacc
aaagctggtaagactggagacgcacaacaaagcaaaggaagagagaatcgcagagaaagc
cgaagaggagacaacaacaaccaatccagagatgctgagaaagatgcaaagatagaaaga
aatccagacagggctgttgaaagaggcgatcgaaacaaatccaatgcaaacatcccaaca
ccaacctcaaaacgctattccaaatcagatattaggcgctcacggaatcgaacttacagc
agtagctcagctagcagcgtgaccagcctggatggtcctcgactagggagagatgtggag
agtagcaagccccgcttggagcctgtgcacaataacaaagaggggatggctaatagtgga
gtcggacgaaggagtcatttacaaagctggacagctaatggggaatcatctacggaaggg
agtgagatgagtgacatagcagaagataggaggaggagaagaggtgggggggaagaacta
agtgcagagaggcggagggaagaaaggaacagactgaaaggaaacaaaggtggaggtcga
ggaatcctgcaggtgtctctcgaaaaaacgtctggtaccgcgtcacatagcaggacatca
cagcaacacaagccagttgtggttcctcgtggcagaggtggaggtatcctggtgcttcca
gctcgcacagacatctccaattcacctgaggttgggcaaaggctactttttggtggaatt
aggggaggcggagcttgcaggagtcgaggaggccgaggaggaatgagacgactctgggat
cccaataaccccgaccagaaacctgctcttaccagcacccagtcctcacagcatttatct
ctccaacagcctatatatctccagacagggaccggatatggacaacttcactttctggac
accgatgatgaggtagcaggcagtcctccggtcccgcagggtgagcactttcgaacccag
caagctgctgccatggcctactacaaattccaaaactctgacaacccctactgctacccc
atgtccaccagtaattcacatagtcctggcacgaccaccaaccagcgctatccatatccc
tatcatatggggccctaccaaatggctccccccaatggtatgtacccgggtcctggtgtg
ggtcagttcggtgggagttacaggggagcaggctattcccagcctgctgcaggaggtagt
ttgtcatttgaagaggtggagcaacaagccagaggagagctggggaggcagctgagggct
gcggatgcacaggagctccagctcagtaacctgctgtccagggacagagtgagtgctgat
ggcctggatcgcatggcccagctcagagctgaccttttggggctatatgagcagatcatc
ctgacagacatcgacttctcagactctcagaacgtggatcagtctttatggaagaatgtc
ttttaccaggtcatagagcgcttccggcagcttcttaaagacccaacatgtgacaacacc
cctcatatcagaaacatgctgcttacgctgcttgatgagggggcactattctttgatggg
ctgctacagaagctgcagacagtgtaccagtttaagttagaggattacatggacggcatg
gctatcagggctcggccattacgtaaaacggtgaagtatgctcttattagtgcacagcgt
tgcatgatctgtcagggagatatagcacgttaccgggaacaagccagtgactcggccaac
tacggcaaggctcgcagctggtacctgaaagcccagcagattgcccccaaaaatggacga
ccatataaccagctggccctgctagcagtctatacaaagcggaagttggatgctgtgtat
tactacatgcgcagcttggcagcttccaaccccatcctgactgcaaaggaaagcctgatg
agtctgtttgaggaagctaagcgcaaggaagagcagctcgagcgaaggaggaggcaggag
catgaaggaggctccagggggccggcagtaagaggaagaggaagaggggaagatggagca
cgtgtggaaatttggattcgcaccagcagacaagcggcaaccccatcgtctcagagggga
ggtagtgaatccagcagagactccgaacaggatggagacctgggaagtctaagcgctagt
gatctaaataagagattcattctgagtttcctgcatgcacatggaaagctcttcactaaa
gtgggcatggagtctttccctggagtggcgagccgtgttctgctggagttcaagacgctg
ctccagcatggccccgccctactgggcttcacacacatgctgcagatcatcaccatcaac
atgttcaccatccactatgcccacagcagaggtgaagacggagaagtgcggtccgtttta
caggagcaaagcactgccctgggcctcggcatgttcgcactactggtgcagcgctgcaca
gagctgctcagggatacccctgcagaaccagtccccatggcagatggagacgagcagggt
aaaggggaggagcatgagggtatggtgcgggtctctgcctttccattggaccttagagaa
ctactgccaagtatcaaggtctggtctgactggatgttggggcaaccagaccagtggaac
ccaccaccctgcagtatagattacagcccagatgtttggcagtgcctggctgacctgtgc
aacatgctggcccgtgtagaccacgaggaagtgccgctgttcaaagtcgacactgaagaa
gttgagggcgatgaggagttgactgtgctgcaattgaaggaggaccggctgcttgctggc
tttatccctctgcttgctgcaccacaggagccgtgttacacagacagacacactgacatg
gcaatagcagcagattgtaagagagtgacggtgctgaagtactttctggaggctttgtgt
ggacaggaagagcctctgttggccttcaagggaggcaaatacatctctgtggcaacttct
ccacctaccaactcaacggattcaaggagcaggcaggattctctaacagagaaagaggct
gatgatgtcatagtcgaggcggagtcatctctctccgcatcagaaggagaggaggaggcg
ggagacagcgagaatgacataagacagctgaaggcgcgacgccacgacctcacaaacaaa
ctggcacagcaacagaagcgcagggacaaaatacaggcggtgctgcagaccggcgggcag
ttggagctggaagtgaggcctctctttttggttccagataccaatggattcattgatcac
ttgggagggttgaagaaactccttcagtgtggaacatacatagtagttgtgccactcatc
gtgatcacagagttggatggcttggctaaaggccaggacaactttggtggaggagtgggc
tcaggtggacgcgtcactggcggtcgcggcaactataatgtcagtgcggcccatgtgcgg
gccgtgcaggagaaggcccggtgtgctgtggctttcctggagaaaggattcgaagccagg
gaaccatacctccgagctctgacgagcagaggaaatcagcttgattctattgccttccgc
agtgaagacacctctggacagcagggtaccaatgatgatgtgattctgtcctgctgcctc
cactactgcaaagacaaggcaaaagatttcatgcctgatcagagaaatggaacagtgagg
ctccaaagggaggtggtgctccttacagatgaccgcaacctgcgcgtcaaagctttgacc
cgcaacgtcccagtgcgagacatccctgctttccttagctgggccaaagtgggctga
DBGET
integrated database retrieval system
