Cebidichthys violaceus (monkeyface prickleback): 137880414
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Entry
137880414 CDS
T10484
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04115
p53 signaling pathway
cve04145
Phagocytosis
cve04148
Efferocytosis
cve04350
TGF-beta signaling pathway
cve04510
Focal adhesion
cve04512
ECM-receptor interaction
cve04518
Integrin signaling
cve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137880414
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137880414
04518 Integrin signaling
137880414
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137880414
04148 Efferocytosis
137880414
09143 Cell growth and death
04115 p53 signaling pathway
137880414
09144 Cellular community - eukaryotes
04510 Focal adhesion
137880414
09142 Cell motility
04820 Cytoskeleton in muscle cells
137880414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cve04131
]
137880414
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cve00536
]
137880414
Membrane trafficking [BR:
cve04131
]
Endocytosis
Phagocytosis
Opsonins
137880414
Glycosaminoglycan binding proteins [BR:
cve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137880414
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
TSP1_ADAMTS
VWC2L_2nd
EGF_3
EGF_CA
cEGF
TSP1_CCN
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
137880414
NCBI-ProteinID:
XP_068577881
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MMLCGIFLLLMLWSCEGARLAESRDDNSVYDLFDLARVNKRNNGVSLVKGADPYSPAYKV
LNADLIPALPDNYLRDLLDSIQAERGFLLLVNLKQFKKTRGSVLTIEKNDGSGPVFEIIS
NGKANTLDVVYSTMNQQQVVSIEDADLATGHWKNITLFVQDDRVQLFVGCEEINVSEMDL
PISKVLSQEVADVARLRIGKGAVRDKFMGVLQNVRFVFGTTLDAILRNKGCQSGATLTDV
MTLDNPVNGSSPAIRTDYTGHKAKAVQSVCGFSCEDIAGMFKELKGLGVVVKQLSNELRK
VSEDNTLLKKQMNIHTGICIHNGIVHNDKDEWTVDSCTECTCQNSATVCRKISCPLIPCA
NATVPDGECCPRCGTLRDYAEDGWSPWSDWTHCSVTCGRGIQQRGRSCDRINSNCEGTSV
QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGEG
RQTEICQKSPCPINGGWGPWSPWDTCTVTCGGGVQTRKRLCSDPVPKYGGKDCVGDASVS
QVCNKQDCPIDGCLSSPCFPGAKCNSFPDGSFRCGRCPLGYSGNGIACKDIDECKEVPDA
CHTHNGVHRCENTEPGYNCMPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCH
RNANCIYLGVFSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLRCVENATYHCKKDNC
PNLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPRVYNPAQYDADRDDVGDRCDNCV
FEANTDQTDTDSNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL
EHNPDQFDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD
DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDSILDIYDVCPENFAISETDFR
RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFVNTDR
DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN
ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLIHRPKTGLIRVVMYEGKRIMADSGNI
YDKTYAGGRLGLYVFSQEMVYFSDLKYECKDT
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatctttttgctgttgatgctttggagctgtgaaggagcaagattg
gcagagagtcgggatgacaacagtgtgtatgacctatttgatctggcccgggtgaacaag
aggaacaacggagtgagtttggtcaaaggtgcagatccctacagccccgcatacaaggtc
ctcaacgcagacctgatccccgcgctccccgacaactacctcagggacctcctcgactcc
atccaggctgagaggggcttcctcctcctggtcaacctgaagcagttcaagaaaaccagg
ggcagcgttttgaccatcgagaagaatgacggctccggacccgttttcgagatcatctcc
aacgggaaggcgaacactctggatgtggtctactccaccatgaaccagcagcaggtcgtg
tccatcgaggatgccgatttggccaccggacactggaagaacatcacgctgttcgttcag
gacgaccgggtgcagctttttgtcggctgtgaggagatcaacgtatcagagatggatttg
ccaatctccaaagtgctgtcccaggaggtggcagacgttgcccggctcaggattggaaag
ggagctgtaagggacaaattcatgggagtgcttcaaaatgtgcgctttgtctttgggacc
actcttgatgctatactgagaaataagggatgccagagtggagctaccttaactgatgtc
atgaccctggacaacccagtcaatggctccagcccggccatcaggaccgattacaccggc
cacaaagccaaagcagtgcagtctgtctgcggtttctcttgtgaggacatcgccggcatg
tttaaggagctcaagggactcggcgttgtcgttaaacagctgtcgaatgagctccgcaaa
gtgtctgaggacaacacactgctgaaaaagcaaatgaacatccacactggaatttgcatc
cacaacggcattgtgcacaacgacaaagatgaatggaccgtggatagctgcaccgagtgc
acctgccagaactctgctaccgtgtgtcgcaaaatctcctgccctctgatcccatgtgct
aacgccaccgtgccagacggagagtgctgccctcgctgtggaacactgagagactacgca
gaggatggttggtccccctggtctgactggacccattgttcggtgacttgtggtcggggc
atccagcagcgcggacgctcctgcgaccgcatcaacagcaactgtgagggcacctctgtc
cagacccgtgactgctacccccaggaatgtgacaaacgcttcaaacaggacggcggttgg
agccactggtctccctggtcttcgtgctctgtgacctgcggcgagggcgtcatcacccgg
atacgcctctgcaactcccccacaccgcagatgggtggcagggactgccagggagaaggg
cgtcaaactgaaatctgccaaaagtcgccctgtcctatcaatggaggttggggaccttgg
tcaccatgggacacctgcactgtcacctgtgggggaggagtccagacccgcaaacgtctc
tgctccgaccctgtccccaaatatggaggaaaggactgtgttggtgatgcttctgtgtct
caagtgtgcaacaaacaggactgccctattgacggttgtctctccagcccatgcttcccc
ggagcaaagtgcaacagcttccccgatggctctttcaggtgtggcaggtgtccacttggc
tactctgggaacggcatcgcctgcaaagacattgatgaatgtaaagaggtccccgatgct
tgccacacgcataacggagtccatcgctgtgagaacactgagcccggttacaactgtatg
ccctgtcctgcacgtttctccggtcctcagccctttgggagaggagtggaacaggcgact
gctaaaaaacaggtttgcaaaccccgtaacccatgccaagatggcagccacgactgccat
aggaacgcaaactgcatctacttgggcgtcttctccgagtccatgttccgctgcgagtgc
aagccagggtatgctgggaatggccgaatttgcggagaggacagcgacctggacggatgg
cccaacactgacctgcgttgtgtggagaatgccacctaccactgcaagaaggataactgt
cccaaccttcccaactctggccaggaggatcatgacaaagatggcctgggtgatgaatgt
gatcatgatgatgacaatgatgggatccccgatgatagggataactgcccaagagtgtac
aaccctgcccagtatgacgcagacagagatgatgttggcgaccgctgtgacaactgtgtg
ttcgaggccaacaccgaccaaacagacactgacagcaatggcgagggtgatgcctgtgct
gttgacattgatggtgatggcattctgaacgagaatgacaactgcccatatgtttacaac
gtggaccagagagataccgacagggacggggtgggagatcactgtgacaactgccctctg
gagcacaaccccgatcagttcgactctgactcagatcgcataggagacaagtgcgacaac
aaccaggacatcgacgaggacggtcatcagaacaacttggacaactgcccgtacattccc
aacgccaaccaggcagaccacgacaaggacggcaagggcgacgcctgcgatcatgacgat
gacaacgacggcattcctgatgacaaggacaactgcaggctggcgtttaaccctgatcag
ctggactctgatggcgatggccgtggcgatgtgtgcaaagacgattttgaccaagacagt
attctggacatctatgacgtgtgcccggagaactttgccatcagtgaaacagacttccgc
agattccaaatggttcctctggaccccaagggcacctcacagattgaccccaactgggtg
gtccggcatcagggcaaggagttggtgcagactgtcaactgcgatcctggcattgctgtt
ggtttcgatgagttcagcgcagtggatttcagcggaacgttcttcgtcaacacggacaga
gacgacgactacgccggtttcgtatttggctaccagtccagctcacgcttctacacagtg
atgtggaagcagatcacgcagacctactggtcgcacacacccacaagagctcaaggctac
tcgggcctgtcaatcaaagtggtcaactccaccactgggcccggtgagcatctgaggaac
gccctgtggcacaccggagacaccgcaggacaggttcgcactctgtggcacgaccccaag
aacatcggctggaaggacttcactgcctacagatggcatctgatccacagacccaagact
ggacttattagagtggtcatgtacgaaggcaagagaatcatggctgattctggaaacatc
tacgacaagacgtacgctggtgggcggctaggcttgtacgtcttctctcaggagatggtt
tacttctcagacctcaaatacgaatgcaaagatacataa
DBGET
integrated database retrieval system
