Cebidichthys violaceus (monkeyface prickleback): 137880414
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Entry
137880414 CDS
T10484
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04115
p53 signaling pathway
cve04145
Phagosome
cve04148
Efferocytosis
cve04350
TGF-beta signaling pathway
cve04510
Focal adhesion
cve04512
ECM-receptor interaction
cve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137880414
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137880414
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137880414
04148 Efferocytosis
137880414
09143 Cell growth and death
04115 p53 signaling pathway
137880414
09144 Cellular community - eukaryotes
04510 Focal adhesion
137880414
09142 Cell motility
04820 Cytoskeleton in muscle cells
137880414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cve04131
]
137880414
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cve00536
]
137880414
Membrane trafficking [BR:
cve04131
]
Endocytosis
Phagocytosis
Opsonins
137880414
Glycosaminoglycan binding proteins [BR:
cve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137880414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
TSP1_ADAMTS
EGF_3
EGF_CA
cEGF
TSP1_CCN
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
137880414
NCBI-ProteinID:
XP_068577881
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MMLCGIFLLLMLWSCEGARLAESRDDNSVYDLFDLARVNKRNNGVSLVKGADPYSPAYKV
LNADLIPALPDNYLRDLLDSIQAERGFLLLVNLKQFKKTRGSVLTIEKNDGSGPVFEIIS
NGKANTLDVVYSTMNQQQVVSIEDADLATGHWKNITLFVQDDRVQLFVGCEEINVSEMDL
PISKVLSQEVADVARLRIGKGAVRDKFMGVLQNVRFVFGTTLDAILRNKGCQSGATLTDV
MTLDNPVNGSSPAIRTDYTGHKAKAVQSVCGFSCEDIAGMFKELKGLGVVVKQLSNELRK
VSEDNTLLKKQMNIHTGICIHNGIVHNDKDEWTVDSCTECTCQNSATVCRKISCPLIPCA
NATVPDGECCPRCGTLRDYAEDGWSPWSDWTHCSVTCGRGIQQRGRSCDRINSNCEGTSV
QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGEG
RQTEICQKSPCPINGGWGPWSPWDTCTVTCGGGVQTRKRLCSDPVPKYGGKDCVGDASVS
QVCNKQDCPIDGCLSSPCFPGAKCNSFPDGSFRCGRCPLGYSGNGIACKDIDECKEVPDA
CHTHNGVHRCENTEPGYNCMPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCH
RNANCIYLGVFSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLRCVENATYHCKKDNC
PNLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPRVYNPAQYDADRDDVGDRCDNCV
FEANTDQTDTDSNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL
EHNPDQFDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD
DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDSILDIYDVCPENFAISETDFR
RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFVNTDR
DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN
ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLIHRPKTGLIRVVMYEGKRIMADSGNI
YDKTYAGGRLGLYVFSQEMVYFSDLKYECKDT
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatctttttgctgttgatgctttggagctgtgaaggagcaagattg
gcagagagtcgggatgacaacagtgtgtatgacctatttgatctggcccgggtgaacaag
aggaacaacggagtgagtttggtcaaaggtgcagatccctacagccccgcatacaaggtc
ctcaacgcagacctgatccccgcgctccccgacaactacctcagggacctcctcgactcc
atccaggctgagaggggcttcctcctcctggtcaacctgaagcagttcaagaaaaccagg
ggcagcgttttgaccatcgagaagaatgacggctccggacccgttttcgagatcatctcc
aacgggaaggcgaacactctggatgtggtctactccaccatgaaccagcagcaggtcgtg
tccatcgaggatgccgatttggccaccggacactggaagaacatcacgctgttcgttcag
gacgaccgggtgcagctttttgtcggctgtgaggagatcaacgtatcagagatggatttg
ccaatctccaaagtgctgtcccaggaggtggcagacgttgcccggctcaggattggaaag
ggagctgtaagggacaaattcatgggagtgcttcaaaatgtgcgctttgtctttgggacc
actcttgatgctatactgagaaataagggatgccagagtggagctaccttaactgatgtc
atgaccctggacaacccagtcaatggctccagcccggccatcaggaccgattacaccggc
cacaaagccaaagcagtgcagtctgtctgcggtttctcttgtgaggacatcgccggcatg
tttaaggagctcaagggactcggcgttgtcgttaaacagctgtcgaatgagctccgcaaa
gtgtctgaggacaacacactgctgaaaaagcaaatgaacatccacactggaatttgcatc
cacaacggcattgtgcacaacgacaaagatgaatggaccgtggatagctgcaccgagtgc
acctgccagaactctgctaccgtgtgtcgcaaaatctcctgccctctgatcccatgtgct
aacgccaccgtgccagacggagagtgctgccctcgctgtggaacactgagagactacgca
gaggatggttggtccccctggtctgactggacccattgttcggtgacttgtggtcggggc
atccagcagcgcggacgctcctgcgaccgcatcaacagcaactgtgagggcacctctgtc
cagacccgtgactgctacccccaggaatgtgacaaacgcttcaaacaggacggcggttgg
agccactggtctccctggtcttcgtgctctgtgacctgcggcgagggcgtcatcacccgg
atacgcctctgcaactcccccacaccgcagatgggtggcagggactgccagggagaaggg
cgtcaaactgaaatctgccaaaagtcgccctgtcctatcaatggaggttggggaccttgg
tcaccatgggacacctgcactgtcacctgtgggggaggagtccagacccgcaaacgtctc
tgctccgaccctgtccccaaatatggaggaaaggactgtgttggtgatgcttctgtgtct
caagtgtgcaacaaacaggactgccctattgacggttgtctctccagcccatgcttcccc
ggagcaaagtgcaacagcttccccgatggctctttcaggtgtggcaggtgtccacttggc
tactctgggaacggcatcgcctgcaaagacattgatgaatgtaaagaggtccccgatgct
tgccacacgcataacggagtccatcgctgtgagaacactgagcccggttacaactgtatg
ccctgtcctgcacgtttctccggtcctcagccctttgggagaggagtggaacaggcgact
gctaaaaaacaggtttgcaaaccccgtaacccatgccaagatggcagccacgactgccat
aggaacgcaaactgcatctacttgggcgtcttctccgagtccatgttccgctgcgagtgc
aagccagggtatgctgggaatggccgaatttgcggagaggacagcgacctggacggatgg
cccaacactgacctgcgttgtgtggagaatgccacctaccactgcaagaaggataactgt
cccaaccttcccaactctggccaggaggatcatgacaaagatggcctgggtgatgaatgt
gatcatgatgatgacaatgatgggatccccgatgatagggataactgcccaagagtgtac
aaccctgcccagtatgacgcagacagagatgatgttggcgaccgctgtgacaactgtgtg
ttcgaggccaacaccgaccaaacagacactgacagcaatggcgagggtgatgcctgtgct
gttgacattgatggtgatggcattctgaacgagaatgacaactgcccatatgtttacaac
gtggaccagagagataccgacagggacggggtgggagatcactgtgacaactgccctctg
gagcacaaccccgatcagttcgactctgactcagatcgcataggagacaagtgcgacaac
aaccaggacatcgacgaggacggtcatcagaacaacttggacaactgcccgtacattccc
aacgccaaccaggcagaccacgacaaggacggcaagggcgacgcctgcgatcatgacgat
gacaacgacggcattcctgatgacaaggacaactgcaggctggcgtttaaccctgatcag
ctggactctgatggcgatggccgtggcgatgtgtgcaaagacgattttgaccaagacagt
attctggacatctatgacgtgtgcccggagaactttgccatcagtgaaacagacttccgc
agattccaaatggttcctctggaccccaagggcacctcacagattgaccccaactgggtg
gtccggcatcagggcaaggagttggtgcagactgtcaactgcgatcctggcattgctgtt
ggtttcgatgagttcagcgcagtggatttcagcggaacgttcttcgtcaacacggacaga
gacgacgactacgccggtttcgtatttggctaccagtccagctcacgcttctacacagtg
atgtggaagcagatcacgcagacctactggtcgcacacacccacaagagctcaaggctac
tcgggcctgtcaatcaaagtggtcaactccaccactgggcccggtgagcatctgaggaac
gccctgtggcacaccggagacaccgcaggacaggttcgcactctgtggcacgaccccaag
aacatcggctggaaggacttcactgcctacagatggcatctgatccacagacccaagact
ggacttattagagtggtcatgtacgaaggcaagagaatcatggctgattctggaaacatc
tacgacaagacgtacgctggtgggcggctaggcttgtacgtcttctctcaggagatggtt
tacttctcagacctcaaatacgaatgcaaagatacataa
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