Cebidichthys violaceus (monkeyface prickleback): 137890001
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Entry
137890001 CDS
T10484
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137890001 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cve03000
]
137890001 (irf5)
Transcription factors [BR:
cve03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
137890001 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
137890001
NCBI-ProteinID:
XP_068590177
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSVQPRRIRLKPWLLAQVNSGRYPGLQWLSSEHRLFQIPWRHATRHNPSSGSEEENTVFK
AWALETGKYQEGVDEPEPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKIYEVCEQSG
TTDGADDDDEEMPNLMDLTINPRIVGDPPSFGSFPPHSEAAFEHMIPMTADLRAQGPMVV
QGSFVHAAGLSNGLQDLNSLPPPSAASTPPEPAPMEASSMGDAQNQQPCKYDLLSSVPLT
DLDLRFQYRGRSTGSLTVSNPQGCRIYYGHLEPTPEQVDLFGPVTLQQVLFPGTSDVQNQ
KQRFYTDALLDVMDRGLILEIWEQDIYAVRLCQCKVFWSGPGMPEHGPPNPLEREKKIKV
FSLNDFLQGLILFHRGETQNPPPFEIYFCFGEDWPDKKPKEKKLIIVQVVPVVARILTEM
FSGELSWSTDSIRLQISNPDVKDQTVEQFKELQRLLQSQHIQGPWTPGNVP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcagccccggaggatccgtctgaagccctggctgttggcccaggtgaacagc
ggcaggtatcctggtctccagtggctcagctcagaacaccgactcttccagatcccctgg
agacacgcgacacgtcacaatccgtcctccgggtccgaggaggagaacaccgtgttcaag
gcgtgggccctggagacgggtaaataccaggagggcgtggatgaacctgagccggccaaa
tggaaggcgaacctccgctgcgctctgaacaagagtcgagagtttcagctgaagtacgac
ggcaccaaagagactccggttcaaccgtacaagatctacgaggtctgtgagcagagcggg
accacagatggagccgacgacgatgacgaggagatgcccaacctgatggacctcaccatc
aaccccaggatcgtcggtgaccccccctccttcggctccttcccgccgcattccgaggcg
gcgtttgaacacatgatccccatgaccgccgacctccgggctcagggtccgatggtggtt
caggggagcttcgtccacgccgcaggactctctaacggactccaggacctgaactctctg
ccccccccgtcggcagcgtccactccccccgagccggcaccgatggaggccagcagcatg
ggggacgcccagaaccagcaaccttgcaagtacgacctgctgagcagcgtcccactaaca
gatctggacctgaggttccagtatcgaggccggtcgaccggctctctgaccgtcagtaac
cctcagggctgccggatttactatggacacctggagccgaccccggagcaggtggacctg
tttggacccgtcaccctgcagcaggtcctgttccccgggacgtctgatgttcagaaccag
aagcagaggttctacaccgacgccctgctggacgtcatggaccgcgggctgatcctggag
atctgggagcaggacatctatgccgtccgcctctgtcagtgcaaagtgttctggtccgga
cccggcatgcctgagcacggtccaccgaaccccctggagcgggagaagaagatcaaggtg
ttcagcctcaacgacttcctgcaagggctgatcctgtttcatagaggggaaactcagaac
cctccacccttcgagatctacttctgtttcggggaggactggcccgacaagaaacccaaa
gagaagaagctcatcatcgtccaggttgttccagtcgtggctcggatcctgaccgagatg
ttctctggagaactcagttggtccaccgacagcatccggctgcaaatctcaaaccctgat
gtgaaggaccagacggtggagcagttcaaggagctgcagaggctcctgcagagccaacac
atccaggggccctggacccccggcaatgtcccctga
DBGET
integrated database retrieval system
