Charadrius vociferus (killdeer): 104283133
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Entry
104283133 CDS
T08577
Symbol
IARS
Name
(RefSeq) LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104283133 (IARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cvf01007
]
104283133 (IARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvf03016
]
104283133 (IARS)
Enzymes [BR:
cvf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
104283133 (IARS)
Amino acid related enzymes [BR:
cvf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
104283133 (IARS)
Transfer RNA biogenesis [BR:
cvf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104283133 (IARS)
Prokaryotic type
Other AARSs
104283133 (IARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
Plectin_PPL
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
104283133
NCBI-ProteinID:
XP_009879591
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MVQQVPENVTFPNEEEKILELWKNLNCFXECLKQSKNRPRFNFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEEYNNQC
RGIVMRYSKEWEFSVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDASVSLVAWTTTPWTLPSNLALCVNP
ELLYVKLRDNATGKIYILMESRLIALYKSDSEYEILDRFPGIALKGKKYKPLFEYFIQCK
NKGAFAVVADSYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSAPVCPVDASGCFTA
EVPDFAGQYVKDADKNIIKLLREKGRLVHSSNFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVREKRFGNWLKEARDWAISRNRYWGTPIPLWVSADFEEVVC
IGSIAELEELSGVKVTDLHRESIDHLTIPSRCGKGLLHRVPEVFDCWFESGSMPYAQVHY
PFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPMSIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAY
RFLVQNVQILQHKDEGREFLYNENTVKESSNIMDKWILSFTQSLIQFFKAEMAAYRLYTV
VPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRVIRDRK
TIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHM
VLGKRLKGAFKLVTAAIKELKSEQLEKFQETGTIVVEGHELHGEDLRLMYTFDQVAGGSA
QFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRAHPEG
DYLDTVIKEHTDFIFATIKAALKPYPVPTSKEVLIQETTQLKGSELEITLVRGGLCQCVG
PACAYVNLKVCVNGSEQDGVLLLENPKGDNTLNFTGLVDAISCIFGLKNSKLTVFNGKTE
LINKTDLLSLSGKTLHVTTGSAPALISSPDALLCQYINLQLMNAKPQECQKGTVGTLLME
NPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTQEITKDISMKNLNMKTVYVRVIP
TTAEC
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacgtaacttttccaaatgaagaagaaaagatattggag
ctatggaaaaatctcaattgtttctaggaatgcctaaagcaatcaaagaatagacctagg
tttaacttctatgatggccctccatttgctactgggcttccacactatggccacattctt
gcaggaaccattaaagacatagtaaccagatttgctcatcagagtggttttcatgtcgac
agaagatttggctgggattgccatggcttacctgtggaatatgagattgacaagacctta
ggcattaaagggccagaagacgtggcaaagatggggattgaagaatacaacaaccagtgc
agaggaattgtgatgagatactcaaaggaatgggagttcagtgttaccagattaggacgc
tggattgattttgaaaatgactataaaaccctttatcctgagttcatggagtctgtgtgg
tgggttttcaagcaactgtatgacaaaggactggtgtatagaggtgttaaggtcatgcct
ttttcaactgcgtgtaacaccccactgtcaaactttgagtcccatcagaattacaaggat
gttcaagatccttcagtgattgtgagcttcccactggatgaagatgcaagtgtttctctt
gttgcttggaccactactccttggaccttgcctagtaatttggccctttgcgttaatcca
gaattgctatatgtgaaattgagagataatgccacaggaaagatttacattttgatggaa
tccaggctgatagcactgtacaaatctgacagtgaatatgagatacttgacaggtttcct
ggcattgctcttaaaggcaagaaatataaaccactcttcgaatattttattcagtgcaaa
aataaaggtgcctttgctgtggtagcagacagttacgtgaaggaggaggaaggcacaggt
gttgtacatcaggccccctattttggtgctgatgattacagagtctgcatggattttaat
atcattcagaaagattctgctcccgtttgtcctgttgatgcgtcaggctgcttcacagca
gaagtgcctgactttgctggacagtatgtgaaggatgcagataagaacatcattaaatta
ctgagagagaaaggcagactggttcacagcagtaattttaagcacagctatcctttctgc
tggaggtcagatactccattgatatacaaagctgtgccaagctggtttgtaagagtggag
cacatggtggagaagctactggagaataacgctcagtgctactgggttccagattttgtg
agggagaagcgttttgggaactggcttaaagaggcacgagattgggctatatctagaaac
cggtactggggaacacctatccctttgtgggtcagtgcggattttgaagaggtagtttgt
attggttcaatagcagaattggaagagctgtctggagtgaaagtcactgatctccatcgg
gaaagtattgatcacctaactatcccttcacgctgtggcaagggcttactgcaccgggtg
cctgaagtttttgattgctggtttgagagtggaagcatgccttatgcacaagtccattat
ccatttgaaaacaaaaaagaacttgaagatgctttccctgctgacttcattgctgaaggc
attgaccaaacccgaggatggttctacactttgctggtgctgtccacagctctttttgga
aggcctcctttcaagaatgtaattgtgaatggcctcgttcttgccagtgatggccaaaaa
atgagcaaaaggaagaagaattatcctgatccaatgagtattgtaaatagttacggagct
gatgcactacggttatacctgatcaattcacctgtggtaagagcagaaaatctgagattt
aaggaggaaggagtaagggatatactgaaggacgtcttcctgccctggtacaatgcatat
cgctttcttgttcagaatgttcagatcctgcaacataaggatgagggaagagaattcctt
tacaatgagaacacagttaaggagagcagtaacatcatggataaatggattctttctttc
acccaatcgctcattcagttcttcaaagctgaaatggcagcttacaggctgtacactgta
gtccctcgattagtgaagttcgttgatattctgaccaactggtatgttagaatgaatcgc
agaagactaaagggtgagaacgggactgaagactgcattatggccttggaaaccttgttt
agtgttttgttctccatgtgcagacttatggcaccatatactccatttatcactgagctg
atgtaccagaatctgaagacgcttattgatccagcctcagttcaggaaaagaatactgaa
agcatccactacctcatgcttccccaagtgagggaggatctcatcgacaaaaaaattgaa
agtgccgtttcttgtttgcagtctgttattgagcttggacgagtaatcagagacagaaaa
accattccagtaaagtatcctttgaaagaagtagttgttatccatcaggatccagaggct
ctggagaacatcaggtctttagagaagtacatactcgaggaacttaatgtacgtcaagtg
acactatctactaataaagataaatacggagtccggttgagagcagaaccagatcacatg
gtgcttgggaagcgtttgaaaggtgcgttcaagcttgtcacggctgcaatcaaagagctg
aagagtgagcagctggagaaattccaggagacaggcaccattgttgtagaaggacacgaa
ctccatggggaagaccttcgtctcatgtatacctttgatcaggttgcaggaggatctgct
cagtttgaggcacattccgatgctcaggttttggttctgctagatgttaccccagaccag
tccatggtggatgaaggagttgcccgggaagtgattaatcgcatccagaagcttcgcaaa
aagcgaaatctggttcctacagatgagattaccgtgtactacagagcacatccagaaggt
gactacctggatactgtcattaaggaacatacggatttcatttttgcaacaataaaggct
gccctgaagccttacccggtgcctacctcaaaagaagttctcatccaggaaacaacccaa
ctgaagggatcagagctagaaattacgctcgtcagaggtggtttgtgtcagtgtgttggt
ccagcctgtgcctacgtcaacctcaaagtttgtgttaatgggtcggagcaagatggtgtg
ttgctgctggagaatccaaaaggagataataccttgaacttcactggactggtagatgcc
atctcctgcatttttggtcttaaaaattcaaaactgacagtttttaatggaaaaacagaa
ctgataaacaaaactgacttgcttagtctcagcggaaagactctacatgtgacaacgggg
tcagcacctgctctgatcagctctcctgatgctctgctctgccagtatatcaacttgcag
ttaatgaatgcaaaaccacaagaatgtcagaaaggaacagtgggaactcttctaatggaa
aaccctgttggtcagaacggattaacgtaccaaggtcttctacatgaaacagcaaaagtt
tttgggctcagaagcaggaggctaaaattgttcctggatgaagcgcaaactcaggagatc
acgaaggacatctccatgaagaacctgaacatgaagactgtctatgttcgtgtcataccc
accacagctgaatgttga
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