KEGG   Charadrius vociferus (killdeer): 104283388
Entry
104283388         CDS       T08577                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104283388 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvf03041]
    104283388 (SMNDC1)
Spliceosome [BR:cvf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104283388 (SMNDC1)
 Complex B
    104283388 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    104283388 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like
Other DBs
NCBI-GeneID: 104283388
NCBI-ProteinID: XP_009879855
UniProt: A0A0A0AC09
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNAENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagaccttgctaagcagttggccagctacaaagctcagcttcagcaagttgag
gctgccttgtctgggaatgcagaaaatgaagacttactaaaactgaagaaggacttacag
gaagtcatagaattaaccaaagatctcctttcaacacaaccttcggaaactcttgcaagt
tctgacagttctgcttctgctctgcccagtcactcctggaaggttggggataggtgtatg
gcgatatggagtgaggatggacagtgttatgaagctgagattgaagaaatagatgaggag
aatggaacagctgcagtcacatttgctggatatggcaatgctgaagttacacctctgttt
aacctcaagcctgtggaggagggaagaaaagcaaaagaggacagtggcaacaaacccatg
tctaaaaaagagatgatagctcagcagcgagagtataaaaagaagaaagctttgaaaaaa
gctcagagaattaaagaacttgaacaagaacgagaggaccagaaagtcaagtggcaacag
tttaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tctcctgagagcgtaactggcaaggttggagtgggaacatgtggaattgcagacaaacct
atgacacagtatcaagatacctctaaatacaatgtcaggcatttgatgcctcagtaa

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