Charadrius vociferus (killdeer): 104284312
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Entry
104284312 CDS
T08577
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04115
p53 signaling pathway
cvf04210
Apoptosis
cvf05164
Influenza A
cvf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104284312 (APAF1)
04115 p53 signaling pathway
104284312 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104284312 (APAF1)
05168 Herpes simplex virus 1 infection
104284312 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
APAF1_C
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WHD_APAF1
NB-ARC
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_RIG_2nd
CARD
CFAP251_N
NBCH_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_Vps41
ASA1
eIF2A
Beta-prop_HPS5
CARD_2
Beta-prop_NWD2_C
Beta-prop_SCAP
WD40_like
Ge1_WD40
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_RSE1_2nd
Beta-prop_ACSF4
Beta-prop_DCAF12
WDR54
Beta-prop_Nup120_160
AAA_16
AAA_22
WHD_Dark
nSTAND6
LRRC37
PAC11
DUF2415
Motif
Other DBs
NCBI-GeneID:
104284312
NCBI-ProteinID:
XP_009880939
LinkDB
All DBs
Position
Unknown
AA seq
1226 aa
AA seq
DB search
MDAKSRNYLLRNRQALEKDIKTSYIMDRMISDEVLTLQEEEKVKQQNTQKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAISSGNGKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKQKLCCLGSDPGWVTVYGMAGCGKTVLTAEALRDHQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
ILDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANCLVRECKGSPLVISLIGALLRDFPSRWEYYLKQLQHKQFKRIRKSSSYD
YEALDEAMSISVEQLNDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVPSQEDC
MYWYNFLAYHMAGANMQKELHDLMFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIVQLGLCQPETNKKSLKNLYRLVVRPHRDAVYHACFSK
DRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCAFSADGEFVATCSADKKVKIWN
SRTGQCKCVYEEHAEQVNCCQFNNGTGQYLLATCSNDTFIKLWDLNKKYCRNTMIGHVNS
VIHCRFSPNDEYVASCSADGTVKLWEARSANELKSIEIKDFFRNADEQPDDVEVLVKCCS
WSRNGDMLLVVAKNKLLLFDVKTCDLLTQVIVSHHSTIQYCDFCPGDELVAVALSHCSVE
LWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSDDQTIRIWETKKVCKSSDAVLKSE
LDVVFHSDEVMILAIYNQKHLQLINGNTDSVVMHTAAQESPISCCCLSEDLKFAAFGQES
GTIKVLQLLDGKVLKSREAYRTSVQHCRFTSDCQTLISSAHDSVIQVWNWQLSECVFLRG
HKEAIKDFRLLENSKLLSWSFDGTVKVWNITTGNTEKDFACHGGAVLSCAVSPDGSKFSS
TSADKTAKIWSFESSSVLHELKGHEACVRCCTFSPNNKLLATGDDKGEIRIWDILTGALL
HFCSPVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGGYLKWWNVITGESLQTFYTNGTNLK
SIHVCPNFEVYVTVDNLGILYVLQKL
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgaagagtagaaattacttacttaggaatcgccaagcattggaaaaagacatc
aagacctcttatattatggatcgtatgatttctgatgaagtactgacgttacaggaggag
gagaaagtgaaacaacagaatacgcagaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactacttcatgaagggtac
agagatcttgctgcactgcttcaggatggtatccctgccatctcctctggtaatggaaag
agttcaatggatggaatgacatcatatgttaagacaattctctgcgaaggaggtgtacca
cagagaccggttgtgtttgtcactcggccgaaactggtagatgctattaaacagaaactg
tgctgcttgggaagtgatccaggctgggtcacagtttatggaatggcaggttgtgggaag
actgttttaacagcagaagctttaagggatcatcagctcttggaagattactttccagga
ggagttcactggatctctgttggaaaacaggacaaagcagggctcctaataaaacttcag
aatctctgtagtaggttagaacatgactctactctttcacaaaggccaccacttaacatt
gaagaggctaaagatcgtcttcgtttgctgatgctacgcaaatatcccagatctcttttg
atcctggacgacatttgggattcctgggtattaaaagcatttgataatcaatgtcaggtt
cttatcaccagcagggacaggagcgtaacagatgctgtggctggcaataaatatgaggtt
catgtggaaagtggactagcacatgagaaaggactggagattttatccctatttgtgaat
atgaaaatatcagaactaccggaacaagctaattgtcttgtaagggaatgcaaaggttct
cctcttgtgatatccttgataggtgcattattacgagacttccctagtcgttgggagtac
tatctcaaacagctgcagcataagcagtttaaaagaataagaaaatcttcttcttatgat
tatgaagcccttgatgaagcaatgtccataagtgttgagcaactgaatgacaattataaa
gactactataaagacctctctatcctcccgaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaacggaagaagttgaagatatactacaggaatttgttaac
aaatcgctattgttctgtgatcgtaatgggaagtcattccattattatttacatgatctt
caacttgactttcttacagagaaaaatcgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatattacaaacttaatacgcctgttccatctcaagaggattgt
atgtactggtacaactttctagcgtatcacatggctggtgccaacatgcagaaggaactc
catgatcttatgttttctctagattggattaaagctaaaacagaattggtagggcctgct
catctgattcacgaatatgtagaatatagttcaatcttggatcaaaaggatagcacagta
cgtgagaacttccaggaatttctgtctttaaatgggcaccttcttggacggcaaccgttt
cctgatattgtacagctgggtctttgccaaccagagacaaataaaaaatccttgaaaaac
ctctaccgtctggttgttcgtccacatagagatgcagtttaccatgcctgcttttctaag
gatagacaaagaatagcatcatgtggagctgataaaacacttcaggtgtttaaagcagaa
agtggagagagactcctggagataagtgcccatgatgatgaaatactttgttgcgctttc
tctgcagatggtgaatttgtagcaacttgttcagctgataaaaaagtgaagatctggaat
tcaagaacaggccagtgtaagtgtgtatatgaagaacacgcagagcaagtcaattgctgc
cagttcaataacggaactggtcagtatcttttagccacctgctcaaatgacactttcatc
aaactttgggatttgaacaaaaagtattgtagaaatacaatgattggtcatgtaaattcc
gtcattcactgtagattttcaccaaatgatgaatacgttgctagctgctcagcagatgga
acagtaaagctttgggaagcacgctcagcaaatgaactgaaaagtattgagataaaagat
ttcttcagaaatgcagatgagcaaccagatgatgtagaggtcttagtaaaatgttgctct
tggtccagaaatggtgacatgcttttggtggtagccaaaaataagcttttgctttttgat
gttaaaacatgtgatttgttaacacaagtcatcgtaagtcatcacagtacaattcaatac
tgtgacttttgtcctggtgatgagttagtagcagttgctttgtctcactgttctgttgag
ttatggaatattaagtctttatcaaaagtagcatattgcaggggacacatgagctgggtt
cactgtgtgacgttttcgccagatggatctttatttctgacatcatctgatgaccagaca
atacgcatttgggaaacaaagaaggtgtgcaagtcttctgatgctgtgctaaaaagtgaa
ctagatgttgtgtttcacagtgatgaagtgatgattttagcaatttacaatcagaaacat
ttacagcttatcaatggaaatacagacagtgttgttatgcacacagcagcccaagaatcc
cccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttggacaggagagt
ggaacaataaaggtattacagttgttggatgggaaagttctgaagtcacgggaagcctac
aggacatccgtgcagcattgtcgatttacttctgattgtcagactctcatttcaagtgct
catgattctgttatacaggtatggaattggcagttgagtgaatgtgtgtttctgagagga
cacaaggaagcaatcaaggatttcagacttctggaaaattcaaaacttctttcttggtct
tttgatggaactgttaaggtttggaatatcactactggaaacacagaaaaagattttgct
tgccatggaggtgctgttctttcctgtgctgtttcacctgatggtagtaaattttcgtct
acttctgctgacaaaaccgcaaagatatggagctttgaaagttcatctgttcttcatgag
ctgaaaggtcatgaagcctgtgtgcggtgctgtactttctctcctaataacaaattattg
gccactggagatgacaaaggagaaataaggatttgggatattttaacaggtgcattactt
cacttctgctcaccagttactgtagatgaaggagaaccaacacatggtggttgggtaaca
gacctctcattttctcctgacagtaaaatgcttgtgtcatctggaggctatcttaagtgg
tggaatgtaattactggagaatccttacaaaccttctacacaaatggaacaaacctcaag
tcaatacacgtgtgccccaattttgaagtgtatgtgactgttgataatcttggcattctt
tatgtattacagaagttgtga
DBGET
integrated database retrieval system
