Charadrius vociferus (killdeer): 104284529
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Entry
104284529 CDS
T08577
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
KO
K19656
intraflagellar transport protein 122
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvf03037
]
104284529 (IFT122)
Cilium and associated proteins [BR:
cvf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
104284529 (IFT122)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
Zn_ribbon_IFT122
Zn_ribbon_IFT122_C
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
TPR_IF140-IFT172
ANAPC4_WD40
EIF3I
TPR_GEMI5
TPR_IFT80_172
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WDR55
TPR_COPA_B
TPR_7
ANAPC3
Beta-prop_IFT140_2nd
TTC7_N
Zf_2nd_IFT121
Beta-prop_TEP1_2nd
TPR_2
Motif
Other DBs
NCBI-GeneID:
104284529
NCBI-ProteinID:
XP_009881173
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MPFNSKGTLIMHFCYQRVRAVRFGRRLTKVRENAKGHNDSIQCVSYNPLTHQLASCSSSD
FGLWSPEQKSVSKHKTSSKITCCSWTNDGQYLALGMFNGIVSIRNKNGDEKVKIERTGGA
SSPIWSICWNPSRDERNDILAVADWGQKLSFYQLSGKQIGKDRVLNFDPCCVSYFTKGEY
ILLGGSDKQVSLFTKDGVRLGTIGEQSSWVWTCKVKPDSNYVVIGCQDGTISFYQLIFST
VHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKGRELVKKIAIYKNRLAIQMPEKILIYEL
YSDDSSDMYYRVKEKIVKKFECNLLVVCSDHIILCQEKRLQCLSFSGIKEREWLMESLIR
YIKVIGGPPGREGLLVGLKNGQILKIFVDNVFAIVLLKQSTAVRCLDMSASRNKLAVVDE
NDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFV
VGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDTDWKELAMEAL
EGLEFETAKKAFTRVRDLRYLELISSIEERKKHGENNNELFLADVYAYQGKFHEAAKLYK
KSGHENLALDMYSDLRMFDYAKDFLGSGDPKDTKMLIKKQADWAKNINEPKAAVEMYLSA
GEHMKAIEISGDHGWVDMLIEIARKLDKAEREPLSKCAFYFKKLDNPGYAAETYMKVGDL
KALVHLHVETHRWEEAFALSEKHPEFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQSEA
VRVLEQLTHNAVVESRFNDAAYYYWMLSMQCLDIAQENEQQKTEMLQKFHHFQRLAEIYH
VYHSIQRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLFALAKQSKALGAYK
LARHAYDKLQGLQIPARFQKSIELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNV
CINCRQPFVFSASSYEVLHLVEFYLEDGITDEEAVALIDLEAPRLNQRENKWQEMMSDNA
QSLRLDDNTDIIEDDDPFTAKLSFEQGGSEFVPVIVNRAVLQSMSRRDVLIKRWPKPLRW
QYYRSLLPDASITMCPSCFQMFHTEDYELLVLQHNCCPFCRRRIDESNQ
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcaattcaaaagggactttgattatgcacttctgctatcaaagagtacgtgct
gttagatttggaagaaggttgactaaggtcagagaaaatgccaaggggcataatgactct
atacagtgcgtttcatacaatcctcttacacatcagttggcatcctgctcttccagcgac
tttggcttgtggtctcctgaacagaagtcagtctctaagcataaaactagcagtaagatt
acttgctgtagctggacaaatgatggccagtaccttgctttggggatgttcaatggcatt
gtcagcatacggaataagaatggtgacgagaaagtaaaaatagagcgtacagggggtgct
tcatctccaatatggtcgatttgttggaatccatccagagatgaacgtaatgatatttta
gctgtggcagactggggtcagaaactttccttttaccagcttagtggcaaacagattggg
aaggacagagtgctcaactttgatccttgctgtgttagctattttactaaaggagagtat
attttactgggaggttcagataaacaagtttccctcttcacgaaggatggtgtgcgtctt
ggtaccataggagagcaaagcagttgggtgtggacatgcaaagttaaaccagactccaac
tatgtggtgataggatgccaagatggaacaatatccttctatcagttgattttcagcact
gttcatggcctttataaagatcgctatgcttacagagacagcatgactgatgttattgtc
caacacctcatcactgagcaaaaagttagaataaaaggcagagaacttgtaaagaaaatt
gccatctacaaaaacagattagcaatccagatgccagagaaaatcttgatttatgagtta
tactcggatgattcttcagatatgtattatcgggtgaaagaaaagatagtaaaaaaattt
gaatgcaacttgctggttgtatgttcagatcacattattttatgccaggagaaaagacta
cagtgcctctcatttagtggcattaaagaacgagaatggctaatggaatctcttattcgt
tatattaaagtaattggaggacctccaggaagagaaggcctcttagttggtctaaagaat
ggtcagattctgaagatatttgttgataatgtcttcgcaatcgtcctgttgaagcagtcc
acagctgtgcgctgtctggatatgagtgcatctcgaaacaagctggcagtggttgatgaa
aatgatacctgcctagtatatgatattcataccaaagagttgttgtttcaggaacccaat
gctaatagcgtggcctggaatacacagtgtgaggatatgctttgcttttctggagggggt
tacctcaatatcaaagctagtaacttccctgtccatcagcaaaaacttcaaggctttgtt
gtgggttacaacggctccaagatcttctgtcttcatgttttttctatgtcagctgttgaa
gttccgcagtctgcacccatgtatcaatatctggaacgaaaaatgtttaaagaagcctat
cagattgcatgtttaggagtaactgatactgactggaaagaactggccatggaagcctta
gaagggctggagtttgagactgctaaaaaggcatttaccagggtacgagaccttagatat
ttagaactgatcagcagcatagaggaacggaagaagcatggagagaacaacaatgaactg
ttcctagcagatgtttatgcctaccagggaaaattccatgaggcagcaaagttgtacaaa
aagagtggccatgaaaacctagctcttgatatgtactctgatttacgcatgtttgactat
gcaaaggattttctgggatctggagaccccaaagacacaaagatgctaataaaaaaacaa
gcggattgggccaagaatatcaatgaaccaaaagcagcagtggagatgtacctctctgca
ggcgagcacatgaaggccatagaaatcagtggggaccatggctgggttgacatgttaatt
gaaatagctcgaaaactggataaagctgagcgtgagcctttgtcaaaatgtgccttctat
tttaagaaacttgataaccctggctatgcagcagaaacctacatgaaggttggtgacctg
aaagcattggtccatctccacgtggagactcatcgctgggaagaagcatttgctttgagt
gaaaagcatcctgaattcaaagatgatgtttatgtcccttacgctcagtggctagcagag
aatgatagatttgaagaagcccaaaaagcgtttcacaaggctggcaggcagagtgaagct
gtaagagtgctggagcagctaacgcacaatgctgtggttgaaagccgatttaacgatgca
gcctattattattggatgctttccatgcagtgtttagatatagcccaagagaatgaacaa
cagaagactgaaatgttacagaagtttcatcacttccaacgtttggcagaaatttaccat
gtctatcactctattcaaagatacactgaggagcctttcagtttccacttgcctgaaacc
ctcttcaatatttccaggtttctgcttcacagcttaacaaaggagactcctttggggatc
tcaaaagtcaatacattatttgccctggcaaaacagagtaaagctcttggtgcatataaa
ctggctcgtcacgcctatgacaagttacagggactgcagatcccagctaggttccagaaa
tcaattgagctgggcagcctgacaatccgatccaagccattccatgacagtgaagagctt
gtgcccttgtgctataggtgctctaccaacaaccctttgctaaataacttggggaacgtc
tgcattaactgcagacagcctttcgtcttctccgcgtcctcctatgaggtactgcatctt
gtcgagttctatttggaagatggcatcacggatgaagaagctgtagctctcattgatctt
gaagctccaagattgaatcaaagagagaataagtggcaagagatgatgagtgacaatgca
cagagtttgaggcttgatgacaatacagatattattgaagatgatgatccctttacagca
aaactgagctttgagcaaggaggctcagaatttgttccagtgattgtgaatcgtgctgtt
ctccagtcaatgagccggagggacgtcctgattaaacgctggccgaagccattgcggtgg
cagtactaccgttccctgctaccagatgcctccattaccatgtgtccgtcatgttttcag
atgtttcacacagaagactatgagcttctcgtactccagcataattgttgtccattttgt
cgacggagaatagatgagtcaaaccaatga
DBGET
integrated database retrieval system
