KEGG   Charadrius vociferus (killdeer): 104284857
Entry
104284857         CDS       T08577                                 
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
  KO
K10260  F-box and WD-40 domain protein 7
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104284857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvf04131]
    104284857
   04121 Ubiquitin system [BR:cvf04121]
    104284857
Membrane trafficking [BR:cvf04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    104284857
Ubiquitin system [BR:cvf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     104284857
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_THOC3 WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 DSE1_N WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd F-box-like ANAPC4_WD40 Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd ASA1 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_RIG_1st F-box CFAP251_N Beta-prop_ACSF4 Beta-prop_NOL10_N TRM82_WD Beta-prop_VPS8 WD40_MABP1-WDR62_1st PAC11 WDR90_beta-prop_4th PQQ_2 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd WD40_RFWD3 Ge1_WD40 Beta-prop_NWD2_C Beta-prop_IP5PC_F KNTC1_N PALB2_WD40 Beta-prop_pof12 Beta-prop_WDR19_2nd Vts1
Other DBs
NCBI-GeneID: 104284857
NCBI-ProteinID: XP_009881533
LinkDB
Position
Unknown
AA seq 669 aa
MTCRRRPSSEETARVSPGLQGDSKAPVPQVVAEEEDVSGPWEPERSGKGSPAAGPETDGS
SGRGAQETVNSTVCGEQEEEEEEEEEEESCYSEEGEDGSNVYFYYTIGERWIDYLQRTED
GGLLRHVRPKMKRKSENGLDGRALSPGKKLCKGSEYSRTLGPCTPSPTTTFGDLRNAKAG
QARRRRIPSVAPPPELQDWLRTFQRWSGPEKLLALDELIDRCEPSQIKYMMQVIEPQFQR
DFISLLPKELALYVLSFLEPRDLLRAAQTCRYWRVLAEDNLLWREKCREEGIEEPLNLRK
RRLLSPGFMYSPWKFAFMRQHKIDMNWRSGELKAPKVLKGHDDHVITCLQFCGNRIVSGS
DDNTLKVWSAVTGECVQTLVGHTGGVWSSQMRDSIVISGSTDRTLKVWNADTGECVHTLY
GHTSTVRCMHLHGNRVVSGSRDATLRLWDIETGQCLHVLMGHVAAVRCVQYDGHKVVSGA
YDYTVKVWDPESESCTHTLQGHTNRVYSLQFDGTHIVSGSLDTSIRVWDVESGNCLHTLM
GHQSLTSGMELRDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFSSKFVV
TSSDDGTVKLWDLKTGEFVRNLVALESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLL
VLDFDVDLK
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgacttgcaggaggaggccgagcagtgaggaaactgcgagggtgagccctggtctgcag
ggggacagtaaagctcctgtgcctcaggtggtggctgaggaggaggatgtttcaggcccc
tgggagccggagcgctctgggaaagggagccctgcggcaggaccagagactgatggctcc
agcgggcgaggagcgcaggagacagtcaactccactgtctgtggggagcaggaggaggag
gaggaggaagaagaggaagaggagagctgctacagcgaggaaggggaggatggcagcaac
gtctacttctattacaccatcggagagcgctggatagactacctgcagcggacagaggac
ggcggcctcctccgtcacgtgcggcccaagatgaagcggaagtcagagaacggcctggat
ggccgggccctttcccccggtaaaaagctgtgcaagggctccgagtacagcaggacactg
ggtccatgcacacccagtcccaccaccacctttggggacctgcgcaacgccaaagcgggc
caggcacgccgccgccgcatcccctcagttgccccccctcctgagctgcaggactggctc
cgcaccttccagcggtggagtggcccggagaagctgcttgctctggatgagctcatcgat
cgctgcgagccctcccaaatcaagtacatgatgcaggtcattgaaccccagttccagaga
gacttcatttccctgctgcccaaggagctggcactctatgtcctctcgttcctggagcct
cgggacctgctccgtgctgcccagacctgtcgctactggagggtcttggctgaagataac
ctgctctggagagagaagtgccgggaagaaggcattgaggagcccttgaacctgcggaag
cgacgcctgctgagccctggattcatgtacagcccctggaaatttgccttcatgcggcag
cacaaaatcgacatgaattggcgcagcggggagcttaaagcccccaaggtgctgaaggga
cacgatgaccatgtcatcacctgcctgcagttctgtggcaaccggattgtcagtggctca
gatgacaataccctcaaagtgtggtcagctgtcaccggcgagtgtgtgcagacgctggtt
ggccacacagggggtgtgtggtcttcccagatgagggacagcattgtcatcagcggctcc
acagaccggacgctcaaagtgtggaatgcagacacaggcgaatgcgtgcacacgctgtat
gggcacacgtccacagtgcgctgcatgcacttgcacgggaacagggttgtcagtggctca
cgggacgccactctacgcctctgggacatcgagactgggcaatgtctgcatgtgctgatg
gggcacgtggctgccgtgcgctgcgtgcagtacgacgggcacaaggtggtgagcggtgca
tatgactacacagtgaaagtgtgggaccccgagagcgaaagctgcacgcacacgctgcag
ggacacacgaaccgcgtctactccttgcagtttgatgggacacacatcgtgagtggctct
ctggacacgtcgattcgagtgtgggacgtagagagtgggaactgcctacacaccctgatg
gggcaccagtcgctcacgagtggcatggagttacgtgacaacatccttgtatctggcaat
gctgactccacagtcaagatctgggacatcaagacgggccagtgcctgcaaacgctgcag
gggcccagcaagcaccagagtgccgtcacctgcctgcagttcagctccaagtttgtggtg
accagctcagatgatggtaccgtcaagctctgggacctcaagacgggcgagtttgtgcgc
aacctggttgcactggagagcgggggcagcgggggcgtagtgtggcgcatccgcgcctcc
aacaccaagctcgtgtgtgcggtgggcagccgcaacggcacggaggagaccaagctgctg
gtgctggactttgatgtggacctgaaatga

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