Charadrius vociferus (killdeer): 104285366
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Entry
104285366 CDS
T08577
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvf04040
]
104285366 (SCN4A)
Ion channels [BR:
cvf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104285366 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
104285366
NCBI-ProteinID:
XP_009882118
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRIAEAEALKIKRQHIELPEEEEIKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLIKILSRGFCI
DNFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPLNDTLLGDLGLDNDTLAN
ATLYSNFTDGITSNFTSNFTSNSTFDFEAYINDEANFYFLEGALDALLCGNSSDAGKCPE
GYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVI
FLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKHQEEQERMLQDRRS
SSGSLPSSVVEKERDSDLNSDQDKAKDCNGQVVPKVVLQRSATVIDFNPTNEPEKSDHNH
LTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCPPWVKLK
EFVKMVVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLK
LIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM
LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISLDCTLPRWHMNDFF
HSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSAD
SLAASDDDGEMNNLQIAIGRITKGIDFVKTSLLMLLRRLWKGKKVAPEEEQEHSKRDNSG
LNHVDAGQELKLEYLDGVAGKEHFFMDELDHMNFINNPNLTVQVPIASEESDLYEETSTQ
SETEDAKNPLSSDNASSLCSTVDYKPPQPEEEEIAEEAEDSNEPEECFTEACVKRFPCLY
VDITSDRGKVWWNLRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILE
YADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY
YRCVNTTTGDLFDISVVNNKSDCMALLYTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGW
MDIMYAAVDSREIEEQPVYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFG
GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILICLN
MVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVVVIL
SILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLSPIL
NSGPPDCDPDLENPGSSVKGDCGNPSIGIFFFCSYIIISFLIVVNMYIRINLENFNVARE
ESSDPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLITMDL
PMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLKRKH
EEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALKDDAPEKEGLIATKMHEMYGNSG
TDVETAPAFGLAPVPSSETQDAPGEAKAWDKEYVVKESLV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccaggccccgaaaacctccgccccttcacccctgcctcg
ctggctgccatcgagcagcgcatcgccgaggcagaggcgctcaagataaagcggcagcac
attgagctgcccgaggaagaggagatcaaacccagcagtgacctggaagctggcaagaat
ctgcccctcatctatggtgacccaccgctggagctcatcgggacccccctggaggacctg
gaccctttctacaaggataagaagacgttcatagtcctcaacaaagggaagtccatcttc
cgcttctcagcgacccctgccctctacctgctggggcccttccaccccatccgcagagga
gccatcaaagtgcttatccattcattattcagcatgttcatcatgatcacgattttaacc
aactgtgtctttatgacgctgagcaaccccccggcgtggtccaagaacgtggaatacacc
ttcactgggatatacaccttcgagtccctcataaagatactgtcgagaggcttctgcatc
gacaacttcacattcctgcgtgacccgtggaattggctggacttcatggtcatctccatg
gcctacattaccgagttcgtggacctggggaacatctctgctctcaggaccttccgtgtc
ctccgtgccttgaaaaccatcaccgtgataccagggctgaaaacgatcgttggggctctg
atccagtcggtgaagaagctctcggacgtcatgatcctcaccgtcttctgcctgagcgtg
tttgccctcatcggtctccagctcttcatggggaacctccggcagaagtgcgtgcggtgg
ccccccctcaatgacaccctgctgggggacttggggctggacaacgacacgttggccaat
gcaacactctacagcaacttcactgacggcatcaccagcaacttcaccagcaactttacc
agcaacagcacctttgatttcgaggcctacatcaacgatgaagccaatttctactttctg
gagggagcgcttgatgctctgctctgtgggaacagcagcgatgctgggaagtgccctgaa
gggtaccagtgcatgaaggcggggaggaacccgaactatggctacaccagctacgacacc
ttcagctgggctttcctggccctcttccgcctcatgacgcaggacttctgggagaacctc
ttccagctgacgctgcgtgcagcagggaaaacgtacatgatcttctttgtggtggttata
tttcttggttccttctacctcatcaacctcatcctcgcggtggtggccatggcttacgca
gaacaaaacgatgccacgatgttggaggagcagcagaaggaggaggaatttcagcagctc
atggagcagctgaagaagcatcaagaggagcaagagaggatgttgcaggaccggcgatcc
agcagcggttccctgcccagcagcgtagtcgagaaggagcgcgactcagacctgaacagt
gaccaggacaaggcaaaggactgcaacgggcaagtggtccccaaggtcgtgctgcagcgg
tccgctacggtgatcgatttcaacccaaccaatgaaccagagaaatcggaccacaaccac
ctcaccgtgggcaaccaagatgggccaggcctcgagaagagagtggggagcgccatcagt
gtcatctccaatgctgtggaagagctggaggaagctcaccagaagtgcccaccctggtgg
tacaaatttgcccacacattcctggtctggaactgctgtcctccgtgggtgaagctgaaa
gaatttgtcaagatggtggtgatggaccccttcgtggacttgggcatcaccatctgcatt
gtgcttaacacggtcttcatggccatggagcattaccccatgacagaggagttcgagaac
gtgctgaccgtgggaaacctggtcttcacagggatcttcacggcggagatggtcctgaag
ctcattgctttggacccctacgagtatttccagcagggctggaatatctttgacagcatc
atcgtcaccctcagcctggtggagctaggcttggccaacgtgcaagggctctccgtactc
cgctccttccgcttgctgagggttttcaagctcgccaagtcctggcccaccctcaacatg
ctcatcaagatcatcggtaactcagtgggcgccctggggaacctcacgctggtgctggcc
atcatcgtcttcatcttcgccgtggtggggatgcagctcttcgggaagagctacatagaa
tgcgtgtgcaagatctccctcgactgcacgctgccccgctggcacatgaatgacttcttc
cactccttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatgtgggac
tgcatggaggtggccggtcagaccatgtgcctcatcgtcttcatgatggtcatggtcatt
gggaaccttgtggtgctgaacctgttcttagctttgctactgagctccttcagtgccgac
agcctggcagcatctgacgatgatggagagatgaacaatttgcagatcgctattggcagg
atcaccaaggggattgactttgtcaagacctctctgctgatgctgctccgcaggctgtgg
aaggggaagaaggtggccccggaggaagagcaagagcacagtaagagggacaactctggg
ctaaaccatgtggacgctggccaggagctcaagttggagtacttggacggagtcgctggc
aaagagcattttttcatggatgaactggaccacatgaatttcattaacaaccccaacctg
acggtgcaagtccccatcgcctcagaggagtctgacctctacgaggagacgagcacccag
tccgaaaccgaagatgccaagaatcccctctccagcgacaacgcttcatccctgtgcagc
accgtggattacaagccccctcagccagaggaggaggagattgcagaagaggctgaggac
agcaacgagcccgaggagtgcttcaccgaagcctgcgtgaagaggtttccctgcctctac
gtggatatcaccagtgacagagggaaggtgtggtggaacctccggaaaacctgcttccgc
atcgtggagcacgactggttcgagaccttcatcgtcttcatgatcctcctcagcagcggg
gcgctggcttttgaggacatctacattgaacaacgaaaggtgatacgcaccatcctggag
tatgccgacaaggtcttctcctacatctttgtcattgagatgttgctcaagtgggtggcc
tatggtttcaaggtgtacttcaccaacgcgtggtgctggctggatttcctcatcgtcgat
gtttccattatcagcctgacagcgaactggctgggatactccgagctgggagccatcaag
tccctgcggacgctgagggctctgagaccactccgtgccctgtccagatttgaaggcatg
agggtggtggtgaacgccttgcttggtgccatcccctccatcatgaacgtcctgctggtc
tgcctcatcttctggctgatattcagcattatgggggtgaacctctttgcagggaagtac
taccgatgtgtcaacaccaccacaggggacctctttgacatcagtgtggtgaacaacaag
agtgactgcatggccctcctctacaccaatgaggtcagatgggtcaatgtcaaagtcaac
ttcgacaacgtgggcttgggatacctctccttgctgcaggtggcgaccttcaaaggctgg
atggacatcatgtacgccgccgtggactcacgcgagattgaagagcagccagtgtacgag
atcaacctctacatgtacatctacttcgtcatcttcatcatcttcggcgccttcttcacc
ctgaacctcttcatcggcgtcatcatcgacaacttcaaccagcagaagaaaaagtttgga
ggcaaagacatcttcatgacggaagagcagaagaaatactataatgccatgaagaagctc
ggctccaagaaaccccagaagcccatccccaggccatcgaacaagtttcaagggatggtg
tttgactttgttaccaagcaagtgtttgacataaccatcatgatcctgatttgtcttaac
atggtgaccatgatggttgaaacagatgatcaaagtgaactgaaaacatctgttctctac
aagataaacctggtattcatcgtcatcttcaccggagagtgtgtgctcaaaatgttcgcc
ttgcggtactactacttcactatcggctggaacatctttgactttgtggtggttatcctc
tccatcttaggtatcgtcctctcagacatcatagagaagtactttgtatcacccactctc
ttcagggtcatcaggctggcaaggattggccgtgtcctccggctgatccgaggggcaaaa
ggcatccggactctcctctttgctctgatgatgtccctgcctgccctgttcaacatcggc
ctcctgcttttcctcgtcatgttcatctactccatctttgggatgtccaactttgcctat
gtaaagaaagaggcagggatcgatgacatcttcaactttgaaacttttgggaacagcatc
atctgcctcttccagatcaccacgtcagctggatgggatggcctcctcagccccatcctg
aacagtggcccccccgactgtgaccccgacctggaaaaccctggcagttcggtaaaaggg
gactgtggcaatccctccatcggcatcttcttcttctgcagctacatcatcatttccttt
ctcatcgtggtgaacatgtacattcgcatcaacctagagaacttcaatgtggccagagag
gagagcagcgacccgctctgcgaagatgattttgaaatgttttatgaaacttgggagaag
tttgacccagatgccacccagttcattgcctacagcaccttatcggacttcgtagacacc
ttacaggagccgctcaaaattcccaagccaaacaagatcaagctaatcaccatggatcta
ccaatggttgctggggacaaaatccactgtctggatatcctctttgccctgactaaggaa
gtgctgggagactcgggagagatggatgccttgaaggccaccatggaggagaaattcatg
gccgcaaacccctcaaaggtgtcctatgaacccatcaccaccactctgaaaaggaaacac
gaggaagtctgtgctacaaaaatccagagggctttccggaggtacctcctgaggcgctca
gtgaagcaggcgtcctacatgtacaggcacagtaaagacgaggatgctctgaaagatgat
gcacccgagaaggaaggtctgatcgccaccaaaatgcacgagatgtatgggaacagtggg
acagatgtggagacagcccctgcctttggtcttgcacccgttcccagctcagagactcaa
gatgctcctggcgaagcaaaagcatgggataaggaatacgttgtgaaagagtcgctggta
taa
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