Charadrius vociferus (killdeer): 104288619
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Entry
104288619 CDS
T08577
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104288619 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104288619 (TDG)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
104288619 (TDG)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104288619 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
104288619
NCBI-ProteinID:
XP_009885746
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MKDKYYAYLQQAQAFYTFPFHQMMTAAPNMEIMTEQPTVEGVPEPNVAQEPPKEVKKGGR
KRKAKATEPKQPKKPAAKKEKSAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPD
ILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYG
IGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEVFGIK
VKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIAPNT
EVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPYESEQCNFSSNGTAA
GNPQYCEGSSFGEVPNGQWMTQSFADQIPEFNAGVTREEEGSSA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaggataaatactacgcgtatcttcagcaagctcaagctttttacacgtttccgttc
catcaaatgatgactgcagcgcctaacatggaaatcatgactgagcagccgactgtagag
ggcgttccagagccaaacgttgctcaagagcctccaaaagaagttaaaaaaggaggaagg
aaaagaaaagccaaagcaactgagccaaagcaacccaaaaagcctgctgctaaaaaagaa
aaatcagccaagtcaaaaggcaaacaagaaaagatcacagatactttcaaagtcaaaaga
aaagtggaccgttttaatggtgtgtctgaagcagaacttctgaccaagactttacctgat
attttaacctttgatctggacatcgtaataattggcataaaccctggcttgatggcagct
tacaagggacatcattaccctggacctggaaaccatttttggaagtgtctgttcatgtct
ggtctaagtaatgaacagctgaaccatatggatgaccacaccttgccacataaatatggg
attggatttacaaacatggttgaaaggacaacacctggaagcaaagacctctccagcaaa
gagtttcgggaaggagggcgcattctgatgcagaaattacaaaagtataaacctcgcata
gcagctttcaatggaaaatgtatttatgaaatttttagtaaagaagtttttggaataaaa
gttaagaacttggaatttggactgcagccacacaaggtgccagatacagaaactctctgc
tacgttatgccatcctccagtgcaagatgtgctcagtttcctcgtgcacaagataaagtt
cattattacataaagctgaaagacttaagggatcaactgaaaggcatcgcaccaaacaca
gaggtgcaggaggtgcagtacacgtttgacttgcaacttgcacaagaggatgctaaaaag
atggctgtcaaagaagaaaaatatgatccaggttatgaagcagcttatggaggagcttac
tgtgatcgtgcaccgtatgaaagcgaacagtgcaatttctcttcaaacggaaccgcagca
ggcaatccacagtactgtgaggggtcgtccttcggtgaagttcctaatggacaatggatg
acacagtcctttgcagaccagattccagagttcaatgctggtgtgacacgggaagaagag
ggaagcagtgcgtaa
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