Charadrius vociferus (killdeer): 104292040
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Entry
104292040 CDS
T08577
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104292040 (RAPGEF6)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
104292040
NCBI-ProteinID:
XP_009889666
LinkDB
All DBs
Position
Unknown
AA seq
1667 aa
AA seq
DB search
MSKPIGMQELEGVYWTVDARAGTASGCPMDLNTIYSFLHGLDILSHFREHQLRIMSSSAR
YERYKGNQVLFCSETIARCWYILLSGSVLMKDSMFLPPCSFGKQSGGKRGCECIILEPSE
MIVVENSKDNEENILQREVPLRQSRRRFRKINQRGERQTITDNVDSSSYLLLPADLTKMH
LTDNPHPQVTHVPSSQSGCSIASDSGSSSLSDIYQATESEMGDVDLTGLPEAPVDSEDEE
EEEDEDIDRTSDPLLGRDVVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRREL
CSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISYPDGKSESLCMGNSFGITPSLDK
QYMNGVVRTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRK
GHIVIKATPERLIMHLIEEHSIVDPTYIEDFLLTYRTFLTSPLEVGNKLLEWFTVDSLRD
KVTRVVLLWVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMKGHLRLLNIACAAKAKWRQIT
LQKPSRDSPLFFSLLGGSDKGFGIFVETVETGSKAAEAGLKRGDQIMEVNGQNFENITFV
KALEILRNNTHLSITVKTNIFVFKELLCRIGQEKNGIPHIPKIAEKKNNRYSIPDMPGDV
EQMFPREKGNKKMKANTVSGGRNRIRKILDKTRFSILPPKLFSDGSVSQSQDDSIVGTRQ
CRHSLAIMPIPGTLSSSSPDLLQPTTSILDFSNPSAVGFYYIPDQVIRVFKADQQSCYII
ISKDTTAKEVVSHAVHEFNLTGAPETYSLCEVSVSPEGVIKQRRLPDQFSKLADRIQLNG
RYYLKNNMETETLCSDEDAQELLRESQISLLQLSTIEVATQLSMRDFELFRNIEPTEYID
DLYKLDSKTGNAHLKQFEDVINQETFWVAMEILAEPNQLKRMKIIKHFIKIALHCRECKN
FNSMFAVISGLNLAPVARLRGTWEKLPSKYEKHLRDLQDLFDPSRNMAKYRNILSSQSMQ
PPIIPLFPVVKKDITFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAVMFRQ
RKKRWRSLGSLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSNL
NVETDEEKIQILSLQCEPAYSTLTKNLSERRGAKSSEMSPVPMRSIGQTTKAHQHQQNRM
SQVLQVPTVNLYPSRKKGLTKDHVTFSTGSPQKSLSLSEEVSSKKQTDDTMSMASSLHSS
PPASPQGSPRKVGNIQRSENCSQMNLSGSSSSLASETSNKNSGQRSYGIGYALIPSTKSD
NFSDSSHSEISSRSSIVSNCSVDSMSAALQDERSLSQSLIVVDSGGAERKEHPQPLADYG
QPCPGWSITRPALIRGMAFTSSMSSEEISHEHITVEAADSGRGSWTSCSSSSHDNFQNIP
NQKSWDLLNSYRHTQLDGPIAEVDPTNCYSEEAYLYSEAFSKANRQSKASVELDQSRQSW
ASSSSLSDTYETNYGTIKRRGLENSTAEQTEVLDSKPGADTTYKTVTSSTEKGLIVYCVT
SPKKDDRYREPPPTPPGYMGISLADIKEGSPHHPHLKPPDYSVAVQRSKMLHSDLSRLSS
ASLGSEPVACISSKMPQWHSRQPSNPKLADMTDADSEEDEDEQVSAV
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcccattgggatgcaggagctggaaggggtctactggaccgtggatgcccgg
gccggcacagcgagcggctgtcccatggacttaaatactatctattctttccttcatgga
ctggacatcctctcacatttcagggaacatcagctaagaataatgtcatcaagtgcccgc
tatgagaggtacaagggcaaccaagttctcttctgctcagaaacgattgcaagatgctgg
tatatactgctttctggatctgtgctcatgaaggattccatgtttttaccaccttgcagt
tttggcaagcagtctggaggaaaacgaggatgcgaatgtatcatattggagccttcagaa
atgattgtggtggagaactccaaagacaatgaggaaaacatcttgcaaagagaagtcccg
ctcaggcagtcccgtcggaggtttcggaagatcaaccagaggggcgagcgtcagaccatc
accgacaacgtggattccagcagttacctgttgcttccagctgatcttaccaagatgcat
cttacggacaatcctcatcctcaggtgactcatgtcccctccagccagtcgggatgtagc
atcgccagtgattctgggagcagcagcctatctgatatttatcaggctacagagagtgag
atgggagacgttgatttaacaggtcttccagaagcgcctgtagactctgaagatgaagaa
gaagaagaggatgaagatattgacagaacttcagatccacttctagggcgagatgttgta
cgagagtgccttgagaaagagcctgcagataaaactgatgatgatattgagcaattattg
gaatttatgcatcagctgcctgcctttgcgaacatgactatgtctgtgcgaagagagctt
tgctcggtgatgatatttgaagtagtagagcaagcaggagccatcatacttgaagacggc
caagaactcgactcttggtatgttatattgaacggcacggtggaaatcagctatcctgat
gggaagagtgagagtctctgtatgggaaatagttttgggattactccctccctggacaaa
cagtacatgaatggagtggtcagaaccaaagtagatgattgtcagtttgtgtgtatagcc
cagcaagactactggaggattctgaaccatgtggaaaaaaacactcataaagtggaggaa
gaaggagaaattgttatggtaaaggagcacagggagctggatcgcagtggaaccagaaag
ggacacatcgttatcaaggcaacacccgagcgactcatcatgcacttaatagaagaacat
tctattgtggatccaacctacatcgaagatttcctcttaacgtacagaacatttctaacg
agccccctggaagtcggaaataaactcttggaatggttcacagtggacagcctcagagat
aaggttaccagagtggtcttgctgtgggtgaacaatcattttaatgactttgaaggagat
cctgctatgactcgatttctggaagaatttgaaaagaacttggaagatacgaaaatgaaa
ggacatctcagattgctgaatatcgcctgtgctgccaaagcgaaatggagacaaattacc
ctgcagaaaccttccagagattcgccactgtttttcagcctccttggaggaagcgacaag
gggtttgggatttttgtggagactgtggaaacgggcagtaaagcggcagaagctggactt
aagcggggggatcagataatggaagtaaatggacagaattttgagaacattaccttcgta
aaagctctggaaatcttaaggaacaacactcatctctccattactgtaaaaacaaacatt
tttgtgtttaaggagctgctgtgcaggataggacaagagaagaatggaattccacatatt
ccaaaaattgcagaaaagaaaaacaaccgttattccatcccagatatgcctggagatgtg
gaacagatgtttccccgtgaaaaaggaaacaagaaaatgaaagcaaacactgtatctggt
gggagaaacagaatcaggaaaattttagacaagacccgattcagcatcttgcctccgaaa
ctcttcagcgatggtagtgtgagccagtcgcaggacgacagcatcgtcgggacgcggcag
tgcaggcacagcctggccatcatgcctattccgggaacgctctcgtccagcagcccggac
ctgttgcagcctacaacaagcatcctggatttctctaatccttcagctgttgggttttac
tatatcccggatcaagtaataagagttttcaaagcagatcagcagagttgttacattatc
atcagcaaagacactacagcaaaagaggttgtgagtcacgccgtccacgaattcaacctg
acgggagccccggagacctactccctctgcgaagtgtccgtcagccccgagggagtcatc
aagcagcggagactcccggatcagttctccaagttggccgacaggattcagctcaacgga
cggtattatctaaaaaacaatatggagacagagaccttatgctcggacgaggatgctcaa
gagctgctgagagagagccaaatttccctcctgcagctgagcaccattgaggtggccacg
cagctttccatgagagactttgagttatttcgcaatattgagcctacggaatacatcgat
gacctttataagctggactccaaaacaggaaatgctcacctgaaacagttcgaggatgtc
atcaatcaagagacgttctgggttgccatggaaattttagcagagcccaaccagctcaaa
agaatgaagattattaagcatttcattaaaattgccctccactgtcgagaatgcaagaac
ttcaattccatgttcgcggttataagcgggttaaatctggcaccggtagcgcgtctcaga
ggcacttgggagaagttaccgagcaagtatgaaaagcacctcagagaccttcaagatctt
tttgatccatctcgaaacatggcaaaataccgcaacatcctcagcagccagagcatgcag
cctccgattattccactttttcctgttgtcaagaaggatatcacatttctgcatgaagga
aatgactccaaagtggacggcctggtgaattttgagaaactcagaatgatcgccaaagaa
attcgccaagttgtcagaatgacctcagcgaacatggatccggctgtgatgttcagacaa
aggaagaagaggtggagaagtttgggatctctgagccagggcagcacgaactcgaacatg
ctggacgtacagggaggcgctcacaaaaaacgtgcccgacgcagctcgcttctgaacgcc
aagaagctgtacgaggacgcgcagatggcgaggaaggtgaagcagtacttgtccaacctg
aacgtagagacagacgaagaaaagatccaaatattgtcactgcagtgtgagcctgcatac
agcactttgacgaagaatttaagtgagagaagaggagcgaaatcctcagaaatgtctcca
gtacccatgagatcgattggccaaaccactaaagcccatcagcatcaacaaaacaggatg
agtcaagttcttcaggttccaactgtgaatttataccccagtaggaaaaagggactgaca
aaggatcatgtcacattcagtacaggctccccacagaagtcattaagcttgtctgaggaa
gtaagtagtaagaaacaaacagatgacactatgtccatggcgtcgtctttgcactccagc
ccacctgcgtctcctcagggctctccacgcaaagttggtaacatccaacggtcagagaac
tgcagtcagatgaatctctctggctcttcctcgtcgctcgccagtgaaaccagcaacaag
aacagtggacagcgcagctacggaataggctacgccctcataccttccactaaatctgat
aacttctcagactccagtcacagtgagatttcttcccggtccagcatcgtgagcaactgc
tcagtggactccatgtcggcagcgctgcaggacgagaggagtttgtcccaatctctcatt
gtggtggattcagggggggcagagaggaaagagcatcctcagccgctggctgattacggc
cagccgtgcccaggctggtcaatcactaggcctgctctcatcagagggatggctttcacg
tcctccatgagcagcgaggagatctcccacgaacatatcacggtagaggcagcagacagc
ggccggggaagttggacttcatgctcaagtagttctcatgacaacttccagaatatccca
aaccagaagagctgggatctcctcaattcttaccgtcacacccagctggacggacctata
gctgaagtcgatcccacaaactgttactctgaggaggcttatttgtattctgaagccttt
tccaaagccaacaggcagtcgaaagccagcgtggagctcgatcagtctcggcagagctgg
gcctcctccagctcgctgtcagacacctacgaaacgaactatgggacaattaagcggagg
gggctggagaactctacggcagagcagacggaggttttggactctaaaccaggcgctgat
acaacttacaaaactgttacttcgagtacagagaaaggcctgatagtgtactgtgtcacc
tcacctaagaaggacgataggtatagggagccaccgcccacccctccgggatatatgggg
atttctttagcggacataaaggaaggatcgccccaccacccacacctaaagccgccagac
tatagtgtggcagtgcagaggtcaaagatgctgcacagtgacctctctagactttcatca
gcttctctcggtagtgaaccggtggcctgtatttcatcgaagatgcctcagtggcatagt
cggcagccgtccaaccccaaactagcagatatgactgacgcagatagtgaagaggatgaa
gatgaacaagtatcagcagtctaa
DBGET
integrated database retrieval system
