Charadrius vociferus (killdeer): 104295805
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Entry
104295805 CDS
T08577
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04010
MAPK signaling pathway
cvf04120
Ubiquitin mediated proteolysis
cvf04140
Autophagy - animal
cvf04144
Endocytosis
cvf04620
Toll-like receptor signaling pathway
cvf04621
NOD-like receptor signaling pathway
cvf04622
RIG-I-like receptor signaling pathway
cvf05132
Salmonella infection
cvf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104295805 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104295805 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104295805 (TRAF6)
04140 Autophagy - animal
104295805 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104295805 (TRAF6)
04621 NOD-like receptor signaling pathway
104295805 (TRAF6)
04622 RIG-I-like receptor signaling pathway
104295805 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104295805 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
104295805 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104295805 (TRAF6)
04121 Ubiquitin system [BR:
cvf04121
]
104295805 (TRAF6)
Enzymes [BR:
cvf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104295805 (TRAF6)
Membrane trafficking [BR:
cvf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104295805 (TRAF6)
Ubiquitin system [BR:
cvf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
104295805 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
Sina_ZnF
zf-RING_5
PspA_IM30
Med21
TRAF3_RING
zf-RING_11
HAP1_N
SlyX
CENP-F_leu_zip
CEP104_ZnF
U-box
ATG16
Spc29
UPF0242
HMMR_N
DUF16
DUF1664
Motif
Other DBs
NCBI-GeneID:
104295805
NCBI-ProteinID:
XP_009893892
UniProt:
A0A0A0A312
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSLLYSDNSCGARDVESGCCAAMASACSVGAKEDSVSVSSATGNPPSSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNKGCSMKMELRHLEDHQLQCDFSAVECPQCQGAFQKNHLKEHMTQ
ECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTATNPVPFINGLTFEPAV
FSHMSHAAYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL
EVKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL
AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS
TDGAM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctatatagtgataacagttgtggagcccgagacgtggaaagtggctgctgt
gcagccatggccagtgcttgcagcgttggagcaaaagaagacagtgtgagtgtcagcagt
gcgactggaaaccctccaagttctttcacagaggaaacacaaggatatgatgtggagttt
gatccacccttggaaagtaaatatgaatgtccaatctgtttgatggctcttcgggaagca
gtgcagacaccgtgtggacaccgtttctgcaaaggctgcattgtcaaatcaataagagat
gcaggtcacaaatgtccagtagacaatgaaattctgctcgaaaatcaactttttcctgac
aactttgctaaacgggaaatcctttcattaacggttaaatgtcccaacaagggctgcagt
atgaagatggagctgaggcatttagaggaccaccagttgcagtgcgatttttctgctgtg
gaatgcccacagtgccaaggagccttccagaagaaccatctgaaagagcacatgacgcag
gaatgtccaaggcgtcaagtctgttgtccaaactgtgccacgtctatggcctatgaagat
aaagagcttcatgatcaaacctgtccacttgccaatgtattttgtgagtattgcaacaca
gtgctcatcagagagcagatgcctaaccattatgacaatgattgtcctactgccccagtg
ccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaagaaatgaactggcacga
catatgcaggagttcactcaggttcacatgagaatgatggctcagagttttcaaaatatc
agtgttactgctacaaatcctgtacccttcatcaatggcctaacctttgagcctgccgtc
ttctcacacatgtcacacgctgcctatgattgtaatccagaagttgaaaacttcaaggaa
actattcagcagttggaaggtcgtctggtcagacaagatcaccaaatcagagaactcatt
gctaaaatggagactcagaacacccacatggcagaactcaaacgtactatccgaaatttg
gaggtaaagattactgaaatggaggcacagcaatgtaatggtatttatatctggaagatt
gagaacttcagtggacttcagaaagctcaggaagaagagagacctgttgtaatgcacagt
cctggcttctatactggaaagcctggctacaagctgtgtttgcgcctgcatatccagtta
ccaaatgctcagcgttgtgctaattttatatctctgtttgtccacactatgcaaggagaa
tatgacagccatctgccctggcctttccaaggcactatacgactttctattttggatcaa
tcagaaggccctgaaaggcagaatcatgaagaagtaatggaagccaagccagagttacta
gccttccagagaccaacaattcaccgcaatccaaaaggttttggttatgtgactttcatg
cacctgcaaaccttgaaacaaagaacctttgtaaaggatgatacccttctggtgcgctgt
gaagttttaactcgtttggatttaaatagtctccgcagagaaggatttcaagctcgcagt
actgatggagctatgtag
DBGET
integrated database retrieval system
