Charadrius vociferus (killdeer): 104296052
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Entry
104296052 CDS
T08577
Name
(RefSeq) protein C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104296052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104296052
Membrane trafficking [BR:
cvf04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
104296052
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
104296052
NCBI-ProteinID:
XP_009894179
UniProt:
A0A0A0A6N4
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSALCPPPSPAVAKTEISLNGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRNESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDHIIHTDESF
TPDLNVFQDILHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctttgtccaccaccatctcctgcagttgctaaaaccgagatctctctgaat
ggcgagtcacctttattagctgccacttttgcttactgggacaatatccttggcccccga
gtgcggcatatctgggcgccaaagacagaacaggtgcttctcagtgatggtgaaataact
tttcttgctaaccacacccttaatggagaaatacttcggaatgcagaaagcggtgcaata
gatgtgaagttctttgtcttagcagaaaaaagagtaatcattgtgtcattaatctttgat
ggaaactggaatggagacagaagcacatatggactatcaattatacttccccaaagtgaa
cttggcttctacctaccacttcacagagtgtgcgtggacaggctaacacacattataagg
aaaggaagaatatggatgcataaggagaggcaagaacatttccagaagattgtcttggaa
ggcacggagagaatggaggatcagggccagagcatcattccaatgctgacaggagaagtc
attcctgtaatggaactcctttcatctatgaaatcacacagcgttccagaagaaatagat
ataagtgacacggtgctaaatgatgatgacattggggatagttgccatgaaggctttctc
ctcaatgcaattagttcacacctgcagacctgcggttgttctgtagttgtaggaagcagt
gcagaaaaagttaataagattgtgagaacattgtgtctgtttcttacaccgtcagagcgg
aagtgttccagactctgtagaaatgagtcttctttcaaatacgagtcagggctttttgtt
caaggcttactcaaagatgcaacaggaagctttgtgttgcccttccgtcaagtaatgtat
gccccatatcctactacacatatagatgtagatgtcaatacagtgaagcagatgcccccc
tgtcatgaacatatctataaccaacgacgatatatgagatccgagctgacagcattttgg
agagctaattcagatgaagaaatgtctcaagatcatattatccacacagatgagagtttc
acacctgatttgaatgtctttcaagatatcctgcatcgagatacattagtaaaagccttc
ctggatcagatcttccatttgaagcctggcttgtctctaaggagtactttccttgcacaa
tttctgctagtccttcacagaaaagccttaactttaataaaatacatagaggatgacacg
caaaaaggaaaaaaaccttttaagtctcttcgtagcttaaagatagatcttgacttaaca
gcagagggcgatcttaacataataatggctttggctgagaagattaaaccaggtctacat
tcctttatctttgggaggccgttctacactagcgtacaagaacgtgatatgctcatgacg
ttctga
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