Cyprinodon variegatus (sheepshead minnow): 107081396
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Entry
107081396 CDS
T06110
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107081396
Membrane trafficking [BR:
cvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107081396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
DUF3013
Motif
Other DBs
NCBI-GeneID:
107081396
NCBI-ProteinID:
XP_015225069
Ensembl:
ENSCVAG00000001740
LinkDB
All DBs
Position
Unknown
AA seq
1955 aa
AA seq
DB search
MMSLVVHLKTVAHLRGKGDRIAKVTFRGLPLYSRVAENCEEVAYFNETFRWPIASRLDEN
EMLEIQVYNYSKVFSNRLVGTFCMVLQKVAEEGHVELTDTLIDDNNTSIKTNVTIDIRYQ
SMDGTVGMWSDGEYLDVPDDRDGMFAFETDSLLSGQSHGSGTSPGRSLQGSIPTFRKAGR
GVFSAMKLGKTKSSKDDHRRGDEPAILEMEDLDKKAMRLAGMLEPDTISLASVTAVTTNV
SNKRSKPDIKMEPSAGRPVDYQISITVIEARQLIGLNMDPVVCVEVGDDKKYTSMKESTN
CPYFNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGTFKMDVGTVYFQPEHQFY
HKWAILSDPDDITAGSKGYVKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGIPAE
RQWARFYVKIHRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVQFSGQKGKTSVQKSS
YEPIWNEQVIFTELFPPLCKRIKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLG
PAWVNMYGSTRQYTLMDEHQDLNDGLGEGVSFRARLLISVAVEILDTTSPEIISSTEVQV
EPISNISESATGKMEEFFLFGSFLEATMIDRKIGDKPISFEITIGNYGNQIDGVSKSSSV
KKKKKEGENGEEENELIQNSSEDEDDDDGELTSVSSTPPMKPFITDRNYFHLPYFEKKPC
VYIKSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEIIKTEKAFPERRLRGVLEELSIGC
SRYLTLANKDVNLSGRTKLDRERLKSCMREMDSMGQQARQIRTQVKKNTVKEKLKLAQNF
LQRLRFLADEPQHSIPDVFIWMMSNHKRIAYARIPSKDILYSVVDEETGKDCGKVKAVFL
KLPGKKGFGHAGWTVQAKLELYLWLGLNKNRKEFLNGLPNGFEEIKATKTGQSVPPVTLV
YNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSAQSQVTEVLNETLCPTWDQLLVF
DDVELFGEATELRDDPPIIVVEFYDQDTVGKAEFIGRTFAKPTIKMCDEPYGPPRFPPQL
EYYQIYRGNNTAGELLAAFELLQIPFDAEEIRRALIAVHDFAVPQIKDLPENELLHPPLN
IRVVDCRAFGRYILVGSHAVSTLRRFIYSPPDKSCSNWASAAKLMNGYMVLTNGCSHARS
SPSLSSRTLSRPAGDIALNLEAEPPIRKMDTVVKLDAMSDAVVKVDMSEEESDKEKRKKK
KKKKGGLEEEEETDERVLDWWSKYFASIETLKENLRSQEAAQTDAEDREDLEIAAEGADI
RPDELHLKGSRMKERFKDKKISKDKKKSHAADASEKRPPKTRVEEMMVYNKELESEYANF
EDWLHTFNLYRGKAGDDDEHALDDDRIVGRFKGSLCMYKVPLSQEITREAGYDPNMGMFQ
SIPHNDPIRVLVRIYVVRATDLHPADINGKADPYIVIKLGKSEIKDKENYISKQLNPVFG
KSFDIEATFPMESMLTVSVYDWDLVGTDDLIGETKIDLENRFYSKYRATCGIASSYSVHG
YNIWRDPMKPSQILARLCKEGKVDGPHYGPGGKVKVANRIFTGPTEIEDENGLKKQTEEH
LALIVLNHWEEIPRVGCKLVPEHVETRPLLNPDKPGIEQGRIEMWVDMFPMDKAAPGPAI
DISPRKPKRYELRVIIWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHS
LTGEGNFNWRFVFPFDYLVAEEKIVISKKESMFSWDETEYKIPPRLTLQVWDADHFSADD
FLGAIELDLNRFPRGAKTAKQCTLSMIRNEQELPTISIFKQKRVKGWWPFVARDENDEME
LTGKVEAELHLVTAEEAEKTPVGLGRNEPDPLEKPNRPDTTFLWFLSPLKAIRYLVCNRY
KWLIIKVVLALLLLVLIGLFLYSMPGYLVKKLLGA
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctctagtggttcacctgaagacggtggctcaccttcgggggaaaggtgacagg
atcgcgaaagttacattcagaggtctgcccctctacagccgagtagcagagaactgcgag
gaagtggcttactttaatgagacttttcgatggcccattgccagcagacttgatgaaaat
gaaatgttggagatccaagtctataattatagcaaagtcttctcaaatagactggtaggg
actttctgtatggtgctccagaaagtggctgaagagggacatgtagagctgacagatacc
ctgattgatgacaacaacacatcaataaagaccaatgtcactatcgatatccgatatcag
tcgatggacggcacagtaggaatgtggagtgatggagagtatctggatgttcctgatgac
cgggatgggatgtttgcctttgaaacagacagcttactttcaggacagagccacggatca
ggcacctctcccggccggtcgctgcaggggtccataccaaccttccggaaagcagggaga
ggagttttctcagccatgaaacttggaaagacaaaaagctcaaaagatgaccataggaga
ggagatgaaccagcaatcctggaaatggaagatctggataagaaagccatgcgtcttgct
ggaatgctagagccggacaccatatctttggcatctgtgactgccgtcacaaccaatgtt
tccaataaaagatcaaagccagatatcaagatggaaccaagcgctggacgaccagttgat
taccagatcagcatcacagtgatcgaagctcgacagctaataggtctaaacatggaccct
gtggtgtgtgtggaggttggagatgacaagaaatatacatccatgaaggagtcaaccaac
tgcccatactttaatgagtattttgtgttcgatttccacgtccctcctgatgtcatgttt
gacaagatcatcaagctctcggtcattcattctaaaaaccttttaagaagtggaacattg
gtgggaacgtttaagatggatgtcgggactgtttactttcagcctgaacaccaattctac
cacaaatgggccatcctgtctgaccctgatgacatcacagcagggtccaaaggatacgtt
aaatgtgacattgccgttgttgggaaaggggataacatcaagaccccacataaagccaat
gagaccgatgaagacgacatagagggaaatctcctccttccagagggaatcccagctgaa
aggcaatgggcaagattttatgtcaagatccaccgggctgagggacttcctaaaatgaac
accagcataatggcgaatgtgaaaaaggcttttattggagaaaacagagaccttgttgac
ccctatgttcaagtgcagttttctgggcaaaagggaaagacatcggtccagaagagcagc
tacgaaccaatctggaatgagcaggtcatcttcacagagctattccctcctctttgcaaa
aggatcaaggtacagattagagactctgataaggtcaatgacgttgccataggaacacac
ttcatcgatctacggaagatctcaaatgatggtgataaaggttttttgcccacccttggt
ccagcctgggtcaacatgtacggttccacccgccagtacacactgatggacgagcaccag
gacctaaatgatgggcttggcgaaggtgtatccttcagagctcgcctccttatctctgtg
gctgtggaaatcctggacaccacatcgcctgaaatcatcagctcaactgaggttcaagtt
gaacctatttccaacatctcagagagtgcaacaggaaaaatggaagagttcttcctgttt
ggttcatttctggaggcgactatgatcgacagaaagattggtgacaaaccaataagcttt
gaaattaccatagggaattatggcaaccagatagatggagtgagcaagtcttcctctgtg
aagaagaaaaagaaagaaggtgagaatggggaggaggaaaatgaactgatccagaactcc
agtgaagatgaggatgacgatgatggggaactgacctcagtctcctcgacgcctcccatg
aagccctttatcacagacagaaattacttccatctgccctattttgagaaaaagccttgt
gtctacatcaagagctggtggcaggatcagaggaggcgactttataattcaaacatgatg
gataagattgcagacaagttggaagagggcttaaatgatgttcaggagattattaagaca
gagaaggcctttccggagcgaagactcaggggagttttggaggagctcagtattggctgc
agtcggtatttgacacttgccaacaaagatgtaaacctgtcaggcagaaccaagcttgat
cgagaacggctcaagtcatgcatgagagagatggacagcatggggcagcaggccaggcag
attcgcacacaggtgaagaaaaacacggtcaaagaaaaacttaagctggcgcagaacttc
ctgcagaggctccgtttccttgctgatgagcctcagcacagcatcccagatgttttcatc
tggatgatgagtaaccacaagcgcatcgcttatgcccggattccttccaaagatattctg
tactccgtggtggatgaagagactgggaaagactgtgggaaagtcaaagccgtcttcctc
aagctgcctgggaagaagggttttggtcatgctggctggacagttcaggctaaactggag
ttatatttatggcttggccttaacaagaacagaaaggaattcctaaatggtctcccaaat
ggtttcgaagagattaaagccaccaaaacaggccagtctgtgcctccagttactctcgtc
tacaacatgaagcaggtcttccagctgagagctcacatgtaccaagcccgcagtctgttt
gctgctgacagcagtgggctttcagatcccttcgctagagttttcttctctgcacaaagc
caggttactgaggttttaaatgagaccctctgccccacgtgggaccagctgctagtgttt
gatgatgtggagctgttcggagaggctactgagctgagagacgaccctccaatcattgtg
gttgaattctatgaccaagacactgtgggtaaggcagagttcataggtcggacgtttgca
aagcccaccattaagatgtgtgatgagccttacgggcccccaaggttccccccacagctg
gagtattaccagatatacagagggaacaacactgcaggagagctgctggctgcttttgag
ctactacagataccttttgatgcagaggagatcaggcgagctctaatcgctgtccatgac
tttgctgttcctcaaataaaggacttgccagaaaacgagctgctccatcctcctcttaat
attcgggttgtggactgcagagcatttggacgctacatcctagtggggtcccatgctgtt
tccaccctgagacgctttatctacagtcctccagataaaagctgcagcaattgggcctct
gcagctaagctaatgaatggctacatggttctaaccaatggctgctcccacgctcgctcc
tcacccagcctttcttcccgcaccctgtctcgccccgcaggtgacatcgccctcaacctc
gaagcagagcctcctatccgaaagatggacacagttgtcaagttggatgctatgtctgat
gctgttgtaaaagttgacatgagtgaagaagagagcgataaagaaaaaaggaagaagaaa
aagaagaagaagggaggattggaggaggaggaagagacagatgaaagagtgctggactgg
tggtccaaatattttgcttccattgagacgctgaaggagaacctaagatcccaggaagca
gctcagacagacgcagaggacagagaagaccttgagatagcagctgagggagcagatatc
agacctgatgagctccatctaaaaggctccaggatgaaagaaaggttcaaggacaagaag
atctccaaggacaaaaagaaaagtcatgctgcggacgcctctgagaaacggcctcctaaa
acaagagtggaagaaatgatggtgtacaacaaagagctggagagtgagtatgcaaacttt
gaggactggcttcacactttcaacttatacagaggaaaagccggagatgatgacgaacac
gccctggatgatgacaggattgtgggcagattcaagggctccttatgtatgtacaaagta
cccctctctcaggagatcacaagagaagcagggtatgatcccaatatggggatgttccag
agcattcctcataatgatcccatccgcgttcttgttcgtatctatgtggtcagggcaaca
gacctacatcctgctgatatcaatggaaaggccgatccatacattgtcattaagctgggc
aagtcagaaatcaaagacaaagagaactacatctctaagcagctaaaccctgtgtttggg
aaatcctttgacattgaggccaccttccctatggagtcaatgttaacggtctctgtttat
gactgggatttggttggcacagacgacctcattggggagacaaagatcgaccttgagaat
cggttctacagcaagtacagagcaacctgtggcattgcgtcaagctactctgtgcatgga
tacaacatctggcgggaccctatgaaacccagccagatcctagcaaggctttgcaaggaa
gggaaggttgatggacctcattatggaccaggaggcaaagtcaaagtggcaaatcgaatt
tttactggaccaacagaaatagaggatgaaaatggtctgaagaagcagacagaggagcat
ttagccctgatcgtgttgaatcactgggaggaaattcctcgtgttggctgcaagctcgtt
cctgaacatgtggagaccaggccccttcttaacccagacaagccagggatcgaacagggt
cgcattgagatgtgggtggacatgtttccaatggataaggctgctcccggacctgcaatt
gacatatcaccacggaaaccaaagagatatgagctcagggtgataatttggaatactgat
gaagtaatactggaagacgatgattacttcactggggaaaagtccagtgacatatttgtc
cggggatggttgaaagggcagcaggaagacaaacaagacacagatgtgcattaccactcc
ctgaccggtgagggcaacttcaactggcgcttcgtcttccccttcgattaccttgtagct
gaggagaaaatcgtaatctctaagaaggagtccatgttctcctgggatgagactgaatac
aaaatccctcctcgtctcacgctgcaggtctgggatgctgaccacttttcagcggatgac
ttcctgggtgctattgagttggacctgaacaggttcccccgtggggcaaaaactgccaag
cagtgcaccctcagcatgatccgaaatgagcaggaacttcccaccatttctatcttcaaa
cagaaaagggtcaaaggctggtggccttttgtggcacgtgatgaaaacgacgagatggag
ctcacaggcaaagttgaggctgagcttcaccttgtcactgctgaggaagcggagaaaact
cctgttggactgggaagaaatgagccagatccactggagaaacccaaccgtccagacacc
accttcctgtggttcctgagcccgttgaaggccatccgctacctggtgtgcaaccgctac
aagtggctgatcatcaaagtcgtgctggccctgctcctgctcgtcctgattggcctcttc
ctctacagcatgccgggttacctcgtgaagaaacttcttggagcttag
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integrated database retrieval system
