Cyprinodon variegatus (sheepshead minnow): 107082226
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Entry
107082226 CDS
T06110
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04145
Phagosome
cvg04514
Cell adhesion molecules
cvg04672
Intestinal immune network for IgA production
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107082226
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107082226
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
107082226
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107082226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107082226
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107082226
Exosomal proteins of epithelial cells
107082226
Exosomal proteins of breast milk
107082226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_2
C2-set_2
Ig_3
I-set
ig
Motif
Other DBs
NCBI-GeneID:
107082226
NCBI-ProteinID:
XP_015226276
Ensembl:
ENSCVAG00000008853
UniProt:
A0A3Q2CP85
LinkDB
All DBs
Position
Unknown
AA seq
242 aa
AA seq
DB search
MKCFALLILFLNAVYVASHVPHEITYFVGCFENGTTVVQFDFDGEEILYVDLQREEVVIT
VPVFIDPDPMQVLIGLSILKDALDNKEWCSALQRMFQYKNKSPPKEDPPDTMIFPSREIE
LEMENSLVCFVNNFYPPLVKVSWTKNGHPVSEGVSVGQYHPNKDQTFCLFSTLRFTPSEG
DIYSCTVEHPALETPKTRIWETEIIKENQSLGPDIYCGVGLCVGSLGIATGVFFIVKSQH
LN
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgctttgcattacttatcctctttcttaatgcggtttatgtcgcctctcatgtt
ccccatgaaataacctattttgtgggctgctttgagaacggcaccactgtggtacagttt
gattttgatggtgaggaaatattgtacgttgaccttcaaagagaggaggtcgtaatcacc
gtacccgtcttcattgatccagatcccatgcaggtgttaataggtttgagtatccttaaa
gatgctctggataacaaggaatggtgttcagccctacaaagaatgtttcaatataaaaat
aaatctccaccgaaagaggaccccccagacaccatgatcttcccatcaagagagatagaa
ctggaaatggaaaacagccttgtgtgctttgtgaataatttctatccgcctttagtcaaa
gtcagctggactaaaaatggacacccagtctcagagggggtgtcggttggtcaatatcat
ccaaataaggaccaaaccttctgcctgttctccactttgaggttcacaccgagtgagggg
gacatttattcctgcaccgtggagcatccagcactggagactcctaaaacaagaatctgg
gaaacagaaatcatcaaagagaatcaaagtcttgggcctgatatttactgtggagtcggt
ctctgtgtgggcagtttgggaattgcaactggagtattttttattgtcaagagtcaacat
ttaaactaa
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