Cyprinodon variegatus (sheepshead minnow): 107082239
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Entry
107082239 CDS
T06110
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
KO
K06752
MHC class II antigen
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04145
Phagosome
cvg04514
Cell adhesion molecules
cvg04672
Intestinal immune network for IgA production
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107082239
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107082239
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
107082239
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107082239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107082239
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107082239
Exosomal proteins of epithelial cells
107082239
Exosomal proteins of breast milk
107082239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
C2-set_2
MHC_II_beta
Ig_3
Arylsulfotran_2
C2-set_3
Cna_B
Nlrc4-like_WHD
DUF2273
Motif
Other DBs
NCBI-GeneID:
107082239
NCBI-ProteinID:
XP_015226298
Ensembl:
ENSCVAG00000008905
UniProt:
A0A3Q2FP78
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MHLKNVFIFLQLWFSAEGAYYGYYLGHCQFNFHDSQGVVFLEQLFFNKCLLVQYNSTLGK
VVGYTKEGIIFADILNKNPRFQKHQIWKTNRCNDIAHLLYGNLSTVEPYVTLSSVKAEYS
QHQLMLICSIYNFYPKKIKVTWLRDGKEITSDVTSTDELPNGNWLYQYHSNLEFTPKPGE
KISCMVEHASLREPKIYNWEPEHHSDKKELVIGTAGLLIGLLFSVAGFLYYRRTVIVRER
VSTTEDIYPENNL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgaaaaacgtcttcattttcctgcaactttggttttcagcagaaggtgcttat
tatggctattatttaggccactgccagtttaactttcatgatagtcaaggggttgtgttc
ttggagcagttgtttttcaacaagtgtctactggtccaatataacagcactttgggaaaa
gttgtaggatacacaaaggagggaatcatttttgcagacattctcaacaagaacccaaga
ttccaaaaacatcaaatatggaaaacaaaccgttgcaatgatattgcacatctgttatat
ggaaatctatccacagtggagccctacgtaacgctgagctcagtgaaagcggagtacagt
caacaccaactcatgctcatctgcagcatttacaacttctatccaaagaaaatcaaggta
acatggcttagagacggaaaggagatcacatctgatgtgacgtccactgatgagctaccg
aatgggaactggctttaccaatatcactccaacctggaatttacacccaaacctggagag
aagatcagctgcatggtggagcatgcaagcctcagagagccaaagatttataactgggag
ccagaacatcattctgacaagaaggagctggttataggtacagcagggctgctgattggc
ttgttgttttcagtcgctgggttcctctattacaggaggacagtcattgtgcgggaaaga
gtgtcaacaactgaggatatttatccagaaaacaacctttag
DBGET
integrated database retrieval system
