Cyprinodon variegatus (sheepshead minnow): 107083217
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Entry
107083217 CDS
T06110
Symbol
cep290
Name
(RefSeq) centrosomal protein of 290 kDa isoform X1
KO
K16533
centrosomal protein CEP290
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107083217 (cep290)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107083217 (cep290)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
107083217 (cep290)
Cilium and associated proteins [BR:
cvg03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
107083217 (cep290)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CEP209_CC5
Motif
Other DBs
NCBI-GeneID:
107083217
NCBI-ProteinID:
XP_015227719
Ensembl:
ENSCVAG00000000243
LinkDB
All DBs
Position
Unknown
AA seq
2420 aa
AA seq
DB search
MPPSALIWEKVSKIDPQTLDQCEKDELDEVFRVFVATKEWEVKDKATENITRVLRLGQAL
LKIKEREVKIHESFIDEICLQHVKTENDLRAKVSKLEQESKAQQLGTGPDSRFLRDEIRQ
LEAQLEQREKELTHLKKDMGKEKKTNEELIARMEEAEGEVKKLKRENEQLQQDVEFYRGE
LEQKEPLPSRDESAETQKKLSLANRQLYQCFEDLQRAEDENAHLKTQNEQLQKSLEESVK
EMEKMTDEYNKMKIVVQQTDSIMDQLRKERDHTKLQVRELTDKIQSMTEENEPIMAAVNA
KVEEWKRVLSRKDDEMAVYQQMIRELREKLRSAQLDLDKSNIIALQQAVQERDNQIKMLS
KQVEQYTGEMEKHAQLIEELKMSTEKDKGVSSTSHQRRIEELKSKLKAAETRAMEAEQAL
RQAETHAEEKDRAFIEASNRLSQYESGTYGLEAAIAEIKECNNQIRVRDREAEAMTKEIN
QLELRINDLMDENEDFREKLGLGPKQEVDLTAFRRARDLRQRQYKAENQVLTKEIERLEE
ERLELKKQIRRMVKERGFPQSSVQLEEDVLSGREEQALHKPRSIITDDKIRQKNEYLEKE
LNSKKRELELHKTEFQAQLEDLSKAKRDLEVMLKDVLQAMRVNQEAGANAVAISSLKNLP
SGLDVGSLGGLPDADLKSQIHQLVGRNEELRQELKSAREEASSSFTQLVRAKEKISQLQN
ELELLRTSDGGGVLPRPLTLPEGLGPSSAEIISSLNEYAIRLLQELKNREEKSKKLAETL
KEYKEKFAVISHQQGLLYKEYISEKAEWQKEKQTFTDMKNKLEEQKQVDDVKIQQFNDLL
ETLHKDPEEIKRQLSEASRKLTVLKVNEKKLTRRYSTLLEQEQLLRKENSKMRDESGQMQ
AAVIQRMGYLQRYKEMAAYKIGALQKALDDSVPASELERANKQYTELTVKYRDVLQKDSL
LIQRATKMEHLESENESLREQISAINKELEITKEKLNTMEQAWDNVGSVGTETGMAKADK
ASINNEVISSARRITALEMKELNERQRAEHAHKMYEHMRNSLRQVEERNSELESKFAELT
KMNAEAQRIERELRDELAGSTSRAISDADRARIAELEKAEAELCVEVSKLQEVSDVALSQ
VSALQAKQKSKDKEVEALRRQIMDYQSQSDEKALIAKLHQHIVALQLSEAAALGKLEAAT
SRIQQLEAYKLRAEQRLDASERALFLARQEGRNRATHLRRTIQSLRRQFAGALPLQQQEK
FSLTMLKLQEDRAEAQKARRGAEEERRRAEGRAQELEVRLRGLEELISTLKDVKGAQKVT
EWHKKMEEARLQELRKSRELVVQKEEIAFLKKLVEEQDRAICSLEEDIVQLNSLQEERQL
AWDQREVELERQLDHYEKQQKEILNSAEKFNEGAESLPDPTLPLAHQLEIALGKNREHVR
TILDLQGTCKSLEKKLKENEGSLLKAEQNIMSRDRVINELRLRLPAAADRERLLADLKKN
EEEQPGSQPALKLAHQTIKDLQSRLVKKEDMLKKYQNQLTQARQDQEEMIKRHQEELRLL
HKKLDLNTDNSLDQFKQTAMELMKKPTIRVPTSKHLEQLAELEQTVAEQDASLSSVTEKL
RLTKEELERQRITMETQAKKHTQDIARLEEKYVAQLKTLTSETEDKSSQLAQMEKEMNYL
RTELEAQKEANIRSPTNTMKNLVERLKAQLTQKEKQLKGLSKALLELRAEMTSAAEQQVI
ASAAQREESLNVQMLVDKHTKDLKARLQEVSEELQAAKESARAARSRENTLKEEVEGLNQ
DFQKYQRTLRRLQAEKEEREQEVEELKQQVKRLTSTMQNQSEAGKGPMIENLQKKIKRLE
SDLEKRNQVATNKDDQGKTKEEIVRWEESKKWQAKMEKVKISLKEKERDNESLSKQLSTL
KDLYARLDQEKAALQKKLKARGVTADLVVGVRANEMDREIEELKKKNAELETQIVTIKQH
QALPRDDAMENLMSRNQLLEERLHSLEGQMSKESPSRPSTSGRGTGTPSQRDQDLSKENL
KLASENLELRLQLEQASKDLPRLKNQVADLKEMCTALKQEKAEVDKKLAHIRGTGYSGKT
VPELEKTIGLMKKVVERVQRENEALKKSSIHPNQSRVAALEKENEKLKADYEKLKHQSEA
ELGAKLEAKTKGLEKIAMENERLRKEIKREMEAAERLRVTKTSLELTNEKLESELEETKQ
RLHTALSKAVAVGSDTKATKATVITRMFENKMKELEKELSQKTSSVSELKRQLKEAKERE
ERAQTRVLHLEDQVDMLQKFPAADVGPSKELQAVRLGNAKLKQKLNEDPAQDSEACPEPG
SGNLKRLLQAAESEKSQLQAELRRLRKELKNFDPNFFEELEDLKYNYNLELKKNVLLEEQ
LRKVCDRFGVEAEMPSVSIS
NT seq
7263 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgtccgctctcatatgggagaaagtgtctaaaattgatccgcagactcttgac
cagtgtgaaaaagacgaactggatgaagtcttccgcgtttttgttgcgacaaaggaatgg
gaggtgaaggataaagctacagagaacattactcgagtcctccggctgggccaggccttg
ttaaagattaaagaacgggaagttaaaattcacgaaagctttatcgatgaaatttgttta
caacacgtcaaaactgagaatgatcttcgagcaaaggtgtccaagcttgaacaagagagc
aaggctcagcagctcggcaccgggccagacagccgctttctcagggatgagattcggcag
ctcgaggctcagctggagcaacgggagaaggaattgacccatttaaagaaagacatgggc
aaggaaaagaaaacaaatgaagagttgattgcacggatggaggaggctgagggcgaggtg
aaaaagttgaaaagagagaatgagcagctccagcaggatgtggagttctaccgtggagag
ctggaacagaaggagccgctcccatccagagacgagagtgcagagactcagaagaagctg
agcttggccaaccgccagctttaccagtgttttgaagaccttcagagagcggaggatgaa
aacgcacacctgaagacacagaacgagcagctgcagaaaagcctggaggagtctgtaaag
gagatggagaagatgacagatgagtacaacaagatgaagatcgttgtgcagcagactgac
tcaattatggaccaactcaggaaagaaagagatcacacgaagcttcaagttagagagctg
acagacaagattcaaagcatgactgaagagaacgaaccaattatggcagctgtcaacgcc
aaagtggaggagtggaagagggtgctctctaggaaggatgatgaaatggcggtgtaccaa
cagatgatccgtgagctgagggaaaagctgcgctcagcacagctggacttggacaaaagc
aacataattgctctgcagcaggctgtccaagaacgggataatcagatcaagatgctgagc
aagcaggtggagcagtacacaggagaaatggagaaacacgcccagctcattgaagagcta
aagatgtccacagaaaaagacaaaggtgtatcttcgacatcacatcagagaaggatagag
gagctaaagtcaaaactgaaagctgcagagaccagagcaatggaagcagagcaagctctc
agacaagctgaaacacacgctgaggaaaaagacagagcattcattgaagcttccaatcgc
ctgagccaatacgagtccggaacttatggcctggaagcagctattgccgagatcaaagag
tgtaacaatcaaattagagtgagagatcgtgaggcagaggccatgaccaaagagatcaac
cagctcgagctgagaatcaatgacctcatggacgaaaacgaggatttccgggaaaaactg
ggtctggggccgaagcaagaagtggatctgacggcgtttaggcgtgccagggatctcagg
caacggcagtacaaagctgaaaaccaagttcttaccaaggagattgaacgactggaagaa
gagcgactggagctgaagaaacagatcaggcgcatggtgaaagaaagaggatttccacag
tcaagtgtgcagcttgaggaagatgtcctctctggaagagaagagcaggcgcttcataaa
ccacgcagcatcattaccgatgacaagattaggcaaaagaatgaatacctagaaaaagaa
ctgaacagcaagaagagagagctggagcttcacaagaccgagtttcaagctcaattggaa
gacctttcaaaagcaaagagggatttagaggtcatgctcaaagatgttcttcaagctatg
agggttaatcaagaggctggagcaaatgctgtcgcaatcagcagtctgaagaacctgcct
agtggtttagatgtgggcagccttggtgggctgcctgatgctgacctcaagtcccagatc
catcaactggtggggcggaacgaagagctgaggcaggagctaaaatccgctcgtgaagaa
gcgagcagcagcttcactcagcttgttagagcaaaggaaaagataagtcagctccaaaat
gagctggagctgctcaggacgtcagacggtggtggagtcctccctcgacctctgaccctc
cctgagggcctggggcccagcagcgcagagatcattagctccttgaatgagtatgctatt
cgactgcttcaggagctgaaaaacagggaggaaaaaagcaagaaacttgcagaaactctg
aaagaatacaaagagaagtttgccgtcataagccatcaacagggactcctctataaggaa
tatataagtgagaaggcagagtggcagaaagagaaacagacattcacagacatgaagaat
aagctggaggagcaaaagcaagtggatgatgtgaaaattcaacagtttaacgatctgtta
gaaacacttcacaaagatccagaagaaatcaagagacagctgagcgaggcgtcccgtaag
ctgactgtcctgaaagttaatgagaagaaactgacccggcgatactctactctgttggag
caggaacagctgcttcgcaaggagaacagcaagatgagggatgagagcggccagatgcag
gccgctgtcatccaaaggatgggttatctgcagagatacaaggaaatggcggcctataag
ataggtgccctccaaaaggccttggatgacagtgtgccagcatcagaactggagagggcc
aataagcaatacacagagctgacagtcaaatacagagacgtgctccagaaggacagcctc
ctgatacagagagccaccaaaatggagcatttagagagcgaaaatgagtctcttcgagag
caaatctctgccattaacaaagaactggagatcacaaaggaaaaactcaataccatggaa
caagcatgggataacgtaggttcagtcggcactgaaactggcatggccaaggcagacaag
gcatcaatcaacaatgaggtgatatcgtctgcaagacgaatcacggctttggagatgaag
gagctgaacgagaggcagagggccgagcatgcacacaaaatgtatgaacacatgaggaac
tccctcagacaagtggaggagcgtaactcagagctggagtccaagtttgctgagttgacc
aagatgaatgcggaggcccagcggattgagcgggagctaagagacgagctggcgggaagc
accagcagagccattagtgatgctgacagagccaggattgcagagctggagaaggcagag
gccgagctttgcgtggaggtctccaagctacaggaggtctctgatgtggccttgtctcag
gtgtctgctctccaggccaaacagaaatctaaagataaagaagtggaagctttaaggaga
caaataatggactaccagtcacagtcagatgagaaagccctgatagcgaagcttcaccag
cacatcgtggccctgcagctcagtgaggctgccgctcttggaaaactggaggccgccacc
tctcgcattcagcagctagaggcctacaagctccgcgctgagcagcggttggatgccagc
gagcgagcgctgttcctcgcccgccaggagggccgtaatcgggccacgcaccttcgccgc
accatccagtccctacgcaggcagtttgccggggcgctgcccctccagcagcaggagaag
ttctctttgacgatgctgaaactccaggaggacagagctgaagcgcagaaggcgagaaga
ggagcagaggaggagaggcggagagctgaaggaagagctcaggagctggaagtgaggctg
cgaggtctggaggagcttatctcaaccctgaaggatgtgaagggtgcccagaaggtaact
gagtggcataagaagatggaggaggcccgtctccaggagctgaggaagagtagggagctg
gtggtccagaaggaggaaatcgccttcctcaagaaactcgtggaggaacaggaccgtgct
atttgctcgctggaggaggacattgttcagctgaactcgcttcaagaagaacgccaactc
gcatgggaccagcgggaggtggaactggagcgccagctggaccactatgagaagcagcag
aaagagattctcaacagcgctgaaaagttcaatgaaggtgcagaatcgctcccagaccca
acgctgcctcttgctcatcagttggagatcgccctgggtaaaaacagagagcatgtacgc
acgatattggaccttcagggaacatgcaaaagtttggaaaagaagctaaaagagaatgag
ggatctttattaaaagctgagcagaacatcatgtcaagagacagagtgatcaatgagctg
cgtcttcggcttccagcggccgccgacagagagcgtctgctcgccgaccttaaaaagaac
gaagaggagcagccgggcagccagcctgccctcaagctggctcaccagactattaaagat
ctccaaagtcgacttgtcaagaaggaagatatgctgaagaaataccagaaccaactgact
caggccagacaggatcaagaggagatgataaaaagacatcaggaagagttgagactatta
cacaagaaactggacttgaacacagataactctctggatcagttcaaacagacggccatg
gaattaatgaagaagcccacaatcagagtcccaacatctaaacacctggagcagcttgct
gagttagaacagactgtggcggagcaggatgcatcgctcagctctgtcactgagaagtta
aggctgaccaaagaggagctggagcggcaaaggatcacaatggaaacacaggctaagaaa
catactcaagatatagcaaggctggaggaaaaatatgttgctcagctaaagactctgacc
agtgagacagaggataagagcagtcagctggcccagatggagaaggagatgaattacctt
cgtacagagctggaggctcagaaggaggccaatatccgttccccgaccaacactatgaaa
aacctggtggagcgactcaaagcacaacttactcagaaggagaaacagctcaagggtctc
agtaaagctctactggagctgcgggcggagatgacgtctgccgcagagcagcaagtcatt
gccagtgctgcacagagagaggagagccttaatgtacagatgctggttgacaaacacacc
aaagatctgaaggcacggctacaggaagtgtctgaagaacttcaagctgcaaaggagtct
gccagagcagccaggagcagagagaatactctgaaagaggaggttgaaggcctgaaccaa
gatttccaaaagtatcaaagaactctgagacgtctccaggctgaaaaggaggaacgagag
caagaagttgaagagctcaagcagcaagtgaagaggctcacaagcaccatgcagaatcaa
tctgaagctggtaaaggacccatgatagagaatctgcagaagaagatcaaaaggctggag
tctgacctggagaaaagaaaccaagtggcaaccaacaaagatgatcaggggaagactaaa
gaggaaattgtgaggtgggaggagagcaaaaaatggcaggctaagatggaaaaggtgaag
atttccttgaaagagaaggaacgagataatgaatccttgtcgaagcagctcagcactctt
aaagatctttatgccagacttgaccaggagaaggctgctttgcagaaaaaactgaaagct
cgaggtgtgactgctgacctggtggtgggggtgcgagccaatgagatggacagagagata
gaggagttaaagaagaagaatgcagagctggagacgcaaattgttaccataaagcaacat
caggccttacctcgtgacgatgccatggagaatctgatgtccaggaaccaacttttggaa
gagaggctccactccttagagggacagatgtccaaggaatccccatcaaggccttctact
tcaggacgaggtaccggaactccatcgcagagagaccaggacctttcaaaagaaaacctt
aagttggcgtcagagaacttggagctgcgccttcagctggaacaggccagcaaagacctt
ccaaggctgaagaatcaggttgcagacctaaaggagatgtgcacggcactgaaacaggaa
aaggcagaggtagataaaaaactggcacatatacgagggactggttatagtgggaaaaca
gtccctgagctggagaagaccattgggctgatgaaaaaggtggtggagagagtccagaga
gaaaacgaggcactgaagaaatctagcattcatccaaatcagagcagagtcgcagccctg
gagaaggaaaatgaaaaactgaaggctgactacgagaagctgaagcatcaaagtgaagct
gagcttggtgcaaaactggaagctaaaaccaaaggactggagaagatagcgatggaaaac
gagcgtcttcgcaaggagattaagagggaaatggaggcagcagagaggctgagggtgacc
aagacgagtctggagctaaccaatgaaaagctggaatcagagctggaagaaaccaaacaa
agactgcatacagctttgtccaaagctgtagctgtgggatctgacaccaaagctacaaag
gccaccgttataaccaggatgttcgagaacaagatgaaggagttggagaaggagctctcc
cagaagacctccagcgtgtctgaactcaaacggcagctcaaagaggcgaaggaacgtgag
gaaagggctcagacgcgggtgctacacctggaagatcaggtcgacatgttacagaagttt
cccgcagctgacgtggggccctctaaggagctccaagctgtccgactgggaaatgccaag
ctaaaacagaagctgaatgaagatcctgcacaggacagtgaagcttgtccagaacccggt
tctgggaacctgaaaaggctacttcaagcagctgaaagcgagaaatctcaacttcaagcc
gagctgagaaggctacggaaagagctcaagaacttcgacccaaacttttttgaggagctg
gaggacttgaagtacaactacaacttagagctgaaaaagaatgttctgctggaggagcag
ctgaggaaggtgtgcgatcggtttggggtggaggctgaaatgcccagcgtttccatcagt
taa
DBGET
integrated database retrieval system
