Cyprinodon variegatus (sheepshead minnow): 107084747
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Entry
107084747 CDS
T06110
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00514
Other types of O-glycan biosynthesis
cvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
107084747 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107084747 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvg01003
]
107084747 (lfng)
Enzymes [BR:
cvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
107084747 (lfng)
Glycosyltransferases [BR:
cvg01003
]
Glycan extension
O-Glycan
107084747 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_tranf_2_4
DUF2785
Motif
Other DBs
NCBI-GeneID:
107084747
NCBI-ProteinID:
XP_015230229
Ensembl:
ENSCVAG00000013557
UniProt:
A0A3Q2FV96
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MLKNNGKKTAVSVACTGCLCLLLLLVVALQHQRVQVTDGEDAAARAAPEESARLSGDKKG
FSTYFTKLTRGRREVEKPARTSAAASDPPPAEDISAADIFIAVKTTKKFHQSRLNLLLDT
WISRNMQQTYIFTDGEDDELKKKIGSHAINTNCSAAHSRQALSCKMAVEYDKFIESGKKW
FCHVDDDNYVNVRTLVKHLSQYPHTQDLYIGKPSLDRPIEATERLGDNKMKPVNFWFATG
GAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVPLTRSSLFHSHL
ENLQQVSRSEIHKQITLSYGMFENKSNIISLKGAFPVEEDPSRFRSVHCLLYPDTPWCPP
QVAF
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaataatgggaaaaagacagcggtctctgtagcgtgcacgggatgcctctgc
ttgctgctgctgctggtggtcgcgctgcagcatcagcgcgttcaggtgacggacggagag
gacgcagccgcgcgcgctgcgccggaggagagcgcgcggctcagcggggacaagaaggga
ttctccacctattttaccaagctgacccggggacggagggaggtggagaaacccgcacgg
acctccgccgccgcctcggacccccctccggctgaggacatcagcgcggctgacatcttc
atcgccgtgaaaaccactaagaagttccaccagtccagactgaacctgctgctggacacc
tggatctctagaaacatgcaacagacttacatcttcacagacggagaggacgatgagcta
aagaagaaaatcggaagtcacgcaatcaacaccaactgctctgcagctcatagccggcaa
gctttgtcctgcaagatggcggtggaatacgacaagtttatcgagtcggggaaaaaatgg
ttctgccatgtagacgacgataactatgtgaatgttcggacccttgtgaagcacctgtct
cagtacccccacacccaggatttatacattgggaaacccagcctggaccggccaatagag
gccacagagaggctgggtgacaacaaaatgaaacccgttaatttttggtttgccacggga
ggagccggcttctgcgtgagccgcggtctggcactaaagatgagcccatgggccagtggg
ggtcactttatgaacacagcagagaagatccgcctccctgatgactgcaccatcggctac
atcattgagtcggttctgggggtccctctgactcggagcagcttgtttcactcccacctg
gaaaacctgcaacaggtgtctcgatctgagattcacaagcagatcactctcagttatggg
atgtttgaaaacaagagcaacatcatcagcttgaaaggggcttttcctgtggaggaggat
ccatcaaggttcaggtctgttcactgtctcctgtatccagacacaccatggtgtccccct
caggttgccttctag
DBGET
integrated database retrieval system
