Cyprinodon variegatus (sheepshead minnow): 107084838
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Entry
107084838 CDS
T06110
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04620
Toll-like receptor signaling pathway
cvg04621
NOD-like receptor signaling pathway
cvg04622
RIG-I-like receptor signaling pathway
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107084838 (traf3)
04621 NOD-like receptor signaling pathway
107084838 (traf3)
04622 RIG-I-like receptor signaling pathway
107084838 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107084838 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
DUF4201
zf-C3HC4_4
FapA
Sina_ZnF
zf-RING_UBOX
zf-TRAF_2
zf-RING_4
SPAM
zf-RING_6
GAS
MctB
Fez1
Prefoldin_2
DUF724
BLOC1_2
KxDL
UPF0242
ATG16
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
107084838
NCBI-ProteinID:
XP_015230369
Ensembl:
ENSCVAG00000010245
UniProt:
A0A3Q2CS83
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MSSGRSANGREVQIPLQQVAPSLVAPLSSSLAITPPSHRSANPWIPCEQTAPAGFQPLHG
GFRDHFVEKPEAKYCCEACRRVLCEPRQTECGHRFCQSCISDILSHPNPVCPADMEPLFK
DKIFRDVCCHREIMALKVYCRSKANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCKERVM
RKEIPEHLAWKCKHRESTCEFCGTKMPLTDLPKHKETVCPSFPVSCPNHCSFSSLPRSEL
TSHQHDCPKAQVSCLFHRYGCTFKGLNQDMRQHDSTFVAEHLRMMVKGNCLLENKVENVK
EELMERCKVLPALSSRLSELENQNEELREKNRQTEQKLANMQKLMSSHSEKLLELELELR
SLRVLREEVETLRGTVENVRTRLTALEQGGRSGSGSSHTLASLETQLSRHDDMLSVHEIR
LADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAGKTLSLYSQPFYTGYFGYKMCARV
YLNGDGMGKGTHLSLFFVVMKGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDPHS
SSFRRPTAEMNIASGCPLFVAQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagggagaagtgctaatgggagggaagtgcagatccccctgcagcaggtggcg
ccttcactcgtcgctccgctctcctccagcctcgccatcacgccaccgtcccaccgctca
gccaatccctggattccatgcgagcaaactgctcctgcaggcttccagcctctccatggg
ggattcagggatcacttcgtggagaagccagaggccaaatactgctgcgaggcgtgcagg
cgggtcctgtgtgagccccgccagactgagtgtggacaccgcttctgtcagagctgcatc
agcgacatcctcagtcacccgaacccggtgtgtcccgccgacatggagcctctgttcaaa
gacaagatctttagagacgtatgttgtcatcgagagattatggcgctgaaagtctactgt
cggagtaaagctaatggctgccaggagcaaatgagtctgcagcagattcctgaccacctg
aatgtgtgtccgttcttcgaggtcccctgtccgctggggaaatgcaaggagagggtgatg
aggaaggagatacctgagcacctggcctggaagtgtaaacacagagagagcacctgtgag
ttctgcgggaccaagatgcctctgacggacctcccgaaacacaaagagacggtgtgtccc
tcgtttcctgtgtcttgtcccaaccactgctccttctcttccctgccccgaagtgagctc
acaagccaccagcatgactgtcccaaagcccaggtcagctgcctgttccaccgctatggc
tgcacattcaagggcctaaatcaagacatgaggcagcacgactccaccttcgtagctgag
cacctgagaatgatggtgaaagggaactgcttattagagaacaaggtggagaacgtgaag
gaggagctgatggagcgctgtaaggtgcttcctgcgctcagcagccgactgtcggagctg
gagaaccagaacgaagagctacgggagaagaaccggcagacggagcagaagctggccaac
atgcagaaactgatgagctcccactcagagaagctgctggagttggagctggagctgcgc
tcacttcgtgtgctgagagaagaggtggagaccctacgaggaacggtggagaacgtccgg
accaggctcaccgccttggagcagggggggcggagcgggtcggggtcaagccacactctg
gcatctttggaaactcagctcagtcgccatgacgacatgctgagcgtccacgaaatccgc
ctggccgacatggacttgaggttccaggtactggagacggccagctacaacggaacccta
atatggaagatccgggactacaagaggcggaaacaggaagcggtggcggggaagacgctg
tctctttactcgcagccattttataccggatactttggatacaagatgtgcgctcgggtt
tacctgaacggagacggcatgggcaaggggacgcacctgtcgctgttctttgtggtgatg
aagggcgagtacgacgccctgctgccctggcccttcaaacagaaggtcactctgatgctg
atggaccagggtccttccaggaaacatctgggtgatgccttcaagcctgatcctcatagc
agcagcttcaggcgtcccacagcggagatgaacatcgcctcaggctgccctctgtttgtg
gctcagagcgtcctggagacgggcagctacatcaaagacgacaccatcttcatcaaggtt
accgtggatacctctgaccttcctgacccctga
DBGET
integrated database retrieval system
