Cyprinodon variegatus (sheepshead minnow): 107085090
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Entry
107085090 CDS
T06110
Symbol
lgi1
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich glioma-inactivated protein 1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
107085090 (lgi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRRCT
Motif
Other DBs
NCBI-GeneID:
107085090
NCBI-ProteinID:
XP_015230723
Ensembl:
ENSCVAG00000022540
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MGHLNGWSVLMWVAAACLVLADGRRSRQPRCPVGCTCTKDNALCENVRTVPHTFPSDVVS
LSFVKSGFNEIAGASFVHTPNLQLLXVSFHLFNSKMYKLLSSLYLSCFFFVCIFYRFIEN
NRIASISPFAFRGLKSLLHLSLAYNNLETLPKDVFKGMDALTKVDLRGNNLVCDCQLKWL
VEWMHNTNATLDQIYCSGPPIHQGKKINDLQPQSFDCITTEFASYQLLRFESISVEAFTF
ANEQYVVFAQPFAGTCNFLEWDHVEMTFRTYDTIESTSIVVCKPAVIDNQLFIIVAQLFG
GSHIYKRDSSANKFIKIQDIDILRIRKPNDIETFVIDGESFFVIADSSKAGSTTVYKWNG
IGFYSHQALHPWYRDTDVEYLEISNKPHLILSSSSQRPVVYQWNRSQKKFDRRTDIPDME
DVFSIKHFRVKGELFICLTRYIGDSRVMRWDGAMFKEVQAFPSRGSMVFQPVSVGKWQYA
ILGSDFSLTQVYQWDTKRGQFVPSQELSIQAPRGFSVVSVDNRVFLLASSFKGKTQIYEH
LMIDLSD
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgggacacctgaatggatggagcgtcctgatgtgggtcgctgctgcctgcttggtgctg
gctgatggacgcagatccaggcagcccagatgtccggttggatgcacctgcactaaagat
aatgccctgtgtgagaacgtccgaaccgtgcctcacactttcccgtccgacgtggtttca
ttatcctttgttaagtctggattcaacgagatcgcaggagcaagctttgttcacacacct
aatctgcaactcctgtaagtatccttccatctttttaatagtaaaatgtataaattgtta
agttctttatatttaagttgttttttttttgtgtgtattttttacagattcattgaaaac
aacagaattgcatcaatatctccatttgctttccggggtctaaagtcactgttgcatttg
agtctggcttacaacaacctggaaacactgcccaaagatgtcttcaagggtatggatgct
ttgaccaaagtggatctacgagggaataatctggtttgtgactgccagctcaagtggctg
gtggagtggatgcataacaccaacgcaactctggaccagatctactgcagtgggccacct
attcaccaagggaagaaaatcaatgacctgcagccacagtcatttgactgcatcactaca
gagtttgcctcctatcagctgctgaggtttgagtccatttcagttgaagccttcaccttt
gccaatgagcagtatgtggtgtttgcacagccctttgctggcacatgcaacttcctggaa
tgggatcatgttgagatgacctttagaacatatgacacaattgaaagcacctctattgtt
gtctgcaagccagcggtgattgacaaccagctcttcatcattgtggcccagctgtttgga
ggctcccacatttacaaacgtgactcctctgcaaacaagttcatcaagatccaagatatt
gacattttgaggattcgcaaacctaacgacatcgagacgtttgtgattgatggagaatct
ttctttgtcattgctgacagctccaaggctgggtccacaactgtatacaaatggaacggc
attggcttctattcccaccaggcgcttcatccctggtacagggatacggatgttgaatat
ctagagatttccaacaaaccccacctgattttgtccagcagctcccagaggcctgttgtg
taccaatggaacaggagccagaagaagtttgaccgcaggactgacataccagacatggag
gacgtattctccatcaaacactttcgggtgaaaggtgagctgttcatatgcttgacaaga
tacatcggggactccagggtgatgcgctgggacggtgccatgttcaaagaagtgcaggca
ttcccttcccgtggctctatggtgttccagcctgtctctgtgggcaagtggcagtatgcc
atcctgggcagcgatttttcactgacacaggtctaccaatgggacactaagagggggcag
tttgtcccatctcaggaactgagtattcaggcaccgcgggggttttctgtggtctctgtt
gacaaccgggtgttcctactggcgtccagcttcaaggggaaaactcagatttatgagcac
ctcatgatcgacctgagcgactaa
DBGET
integrated database retrieval system
