Cyprinodon variegatus (sheepshead minnow): 107085744
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Entry
107085744 CDS
T06110
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04081
Hormone signaling
cvg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
107085744
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
107085744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107085744
Membrane trafficking [BR:
cvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
107085744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
107085744
NCBI-ProteinID:
XP_015231751
Ensembl:
ENSCVAG00000018570
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MERLRNVKAFERFHPRLLQQICLCGFYERLVKGITLFRQGDIGTSWYAVLSGSLDVKVSE
TSRYQDAVTICTLGTGTAFGESILDNTPRHATIVTREFSELLRIEQKEFRSLWEKYRHCM
AGLLVPPYGVMESSGSDRMPEKENISNSSFVSMSSHPNKKSFHESPAKLQNKSPSQVPSE
KILRAGKVLRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWQMLQSSCVHSRLQAVGM
WQVLLEEGVLNHVDGETSFQDKYLFYRFLDDEQEDALIPSDDDMRESEGELQDTLLFLSQ
IGPDALMRMILRKPPSERSPDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHERAG
TVLFHQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLRED
NCHFLRVDKEDFNRILRDVEANTVRLKEHGQDVLVLEKSLSSSRNSVHGSSAAHHKYNII
SGTPEKILEHLLEMMRLDSQFTESDSALDDFVLTHCVFIPNSQLCPVLRDHYHAQASQGS
ELEKLDYTLNNKRRVIRLLMKWASVHGEHLQQEDMVFLEEFVLAVSEDAKVLPDLRDQLT
ELERITKSSAEDARSAQRKHKVLLQHFNLGDEKPQRRQPIKGDDEILFKVFCCDHTYTTI
RVSVASSVGEVLEAVADKLGSAEDLILVGLSSAGEKVVFKPNDVSVFSTLSINGRLFACQ
RDQLDVLMPLPEQEGPSVGSLANFELMSSKDVAYHMTFYDWELFHCVHELELIYHTFGRQ
NVNKTTVNLDLFLQRFNEIQFWVITEVCLCSQLNKRVQLLKKFIKIAAHCKEYKNLNAFF
AIIMGLSNPAVSRLSQTWEKLPSKFKKFFGEFENLMDPSRNHRAYRLTVAKLDPPVIPFM
PLMIKDMTFTHEGNKTFIDNLVNFEKMRMMAKTVKTMRYCRSQTFSPESPLAGKHHPDVW
TYVRQLSVIDNQRTLSQLSHSLEPRRS
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtctgagaaatgtgaaagcttttgaacgattccacccccgtctgctgcagcag
atttgtttgtgtgggttctatgagcgcttggtgaaagggatcactctatttcgccaggga
gacattggcacgagctggtatgctgtcctgtctggttccctggacgtgaaagtgtcagaa
acatcaaggtatcaggatgccgtcactatttgcaccctggggaccggcacagcgtttgga
gagtcgatcctggacaacaccccccgacatgctacaattgtcactcgggaattcagcgag
ctcctacgcattgaacaaaaggagttcaggtccctctgggagaaatatcgtcactgcatg
gctggactacttgttccaccctatggagtgatggagagcagtggatctgacagaatgcca
gagaaggagaacataagcaacagttcatttgtttcaatgtccagccatccaaacaagaag
tcctttcatgaaagtccagccaaacttcagaataaaagcccatctcaggttccctctgag
aagatcctgcgagcggggaaggtcctccgcaatgccatcctttccagagcgcctcacatg
atccgggacagaaagtaccacctgaagacctacaggcaatgctgtgtcgggacagagctg
gtcgactggcagatgctgcagagctcttgtgtccactcccgcctccaggctgtgggcatg
tggcaggtgctgctggaggaaggtgtccttaaccatgtggacggagagacaagcttccag
gacaagtacctgttctaccgcttcctggacgatgagcaggaggatgctttgatacccagt
gatgatgacatgagggagagcgagggggagctgcaggacactctgctcttcctctcacag
attggaccagatgctcttatgaggatgatcttaaggaaaccaccttctgaaagatcaccg
gatgacttggagatcatttatgaagaactacttcatataaaggccttatcacacctatca
acaactgtgaagagggagctagcaggagttcttatctttgagtcccatgagagagcaggg
acagtgttgttccaccaaggagaggagggcacatcttggtacataattttaaaaggctca
gtgaatgtcgtcatctatggaaaaggtgttgtctgcactcttcatgaaggagatgacttt
gggaagctggcactggtcaatgacgcccccagagctgcctccattgtccttcgagaggac
aactgtcatttcctgagagtggacaaggaggatttcaacaggattttgagggatgttgag
gccaacactgtgcgtctaaaggagcatggtcaagatgttctggtgcttgagaagagtctc
agcagcagccgaaactctgttcacggatcctctgcagctcaccacaaatacaacataatt
tccgggacaccagagaagattttggagcaccttctcgaaatgatgcgtttggattctcag
ttcaccgagtcagattcagccttagatgactttgtgcttacgcactgcgttttcatcccc
aacagtcagctatgtccggtgctaagagaccactaccacgctcaggcctcgcagggctct
gagctggagaagctggactacactctgaacaacaagcggcgggtgatccgtctgctgatg
aaatgggctagcgtgcacggagagcacctgcagcaggaggacatggtcttcctggaggag
tttgtcctggctgtatcagaggatgccaaagtacttccagacctcagggatcagcttaca
gagctggaaagaataacaaaaagcagtgcagaagatgccagatccgcacagagaaagcac
aaagtccttctgcagcatttcaatttgggagacgagaagcctcagagacggcagccaatc
aagggagatgatgaaatactgttcaaagtgttctgctgtgaccacacctacaccaccatc
agggtctctgtggcgtcctcggtcggggaggtcctggaagctgtggcggacaagctgggg
tcagcagaggatctgatcctggtgggcctcagttcagccggagagaaagttgtcttcaag
ccaaacgatgtctctgtcttctccacgttgagcataaatggacgactctttgcctgtcag
agggaccagctggatgtgttgatgcctctacctgaacaggagggtccatctgtggggtcg
cttgccaatttcgagttgatgagctccaaagacgtggcttaccacatgactttctatgac
tgggagcttttccattgtgtacatgagttggaacttatctatcacacgtttgggagacag
aacgtcaacaaaacgactgtgaacctggatctcttcctgcagagatttaatgaaattcag
ttctgggtaatcacagaggtttgtctgtgttcccagctgaacaaaagggttcagctcctc
aagaagtttatcaagattgctgctcactgtaaggagtacaagaatctaaatgccttcttt
gccatcattatgggtttgagtaacccggcggtgagcagactcagtcagacctgggagaaa
cttcccagcaaatttaagaagtttttcggagaatttgaaaacctgatggatccgtccagg
aaccaccgggcgtatcgactcactgttgccaaactggaccctcccgtcattcccttcatg
cccttgatgataaaagacatgacattcactcacgagggcaacaaaacatttatcgacaat
ttggtcaattttgagaaaatgcggatgatggctaagacagtgaagactatgagatattgc
aggagtcaaacgttcagccctgaatcccctctggctgggaagcaccacccggacgtttgg
acctatgtgcgtcagctcagcgtgatcgacaaccaaaggaccctatcccagctctctcac
agccttgagccccgcaggtcttga
DBGET
integrated database retrieval system
