Cyprinodon variegatus (sheepshead minnow): 107085934
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Entry
107085934 CDS
T06110
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F-like isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecules
cvg04520
Adherens junction
cvg04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107085934
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107085934
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
107085934
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107085934
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
107085934
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
107085934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
Interfer-bind
ig
CRLF2-like_D2
V-set
PTP-SAK
Tc-R-P
DSPc
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
KIAA1549
Motif
Other DBs
NCBI-GeneID:
107085934
NCBI-ProteinID:
XP_015232081
Ensembl:
ENSCVAG00000012259
LinkDB
All DBs
Position
Unknown
AA seq
1927 aa
AA seq
DB search
MVPNIHLAGPLLHRGALLLLFLLGSKVISSLADNRPQFIKTPEDQTGVSGGVASFVCQAS
GEPRPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVDEIH
ASAKLTVLDEDQIPHGFPVIDMGPQLKVVERTRTATMLCAASGNPDPEISWYKDMLPVDI
NSSNGRIKQLRSGGTPIRGALQIENSEMSDQGKYECVAMNSAGTRYSAPANLYVREPREV
RRVPPRFSIPPTNQEVMPGGSVNLTCVAVGSPMPFVKWTMGQLELTKEEELPLGRNVLEV
TNIRESANYTCVAMSSLGVIDATAQVIVKALPKPPTSLTVTETTATSVTLTWDSGNPEPV
SYYMIQYRAKSSDNGFQEVEGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETR
TGEQAPSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDMTAPLSAWQKHNT
DDSSLTTISGLTPEITYSLRVLGFTSVGDGPPSDILQVKTQQGVPAQPSSFEAEAELDSR
ISLSWLWPVQDQITKYELQYWEAGSDSKKHVTFNPAGSYAVDGLKPDTLYYFSLAARSET
GLGVYTQPIQARTAQSTPSAPPQEVHVVSLTSTSLKVSWVAPPADSRHGAIVRYTISYQA
PAGEDTERHDVSDIGADATSYVLEGLEKWTEYDVWVRAHTDVGPGPESVPVKIRTKEDVP
GAPPRKLEVDAINSTAIRVTWKPPVQVKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALP
EAQWNIEESTEHEAIIGGLHAETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMMI
STTMGNTALIQWQPPKEMVGELIGYQLQYKRTDEEAFTSLELSKTKDHHTVTELHKGATY
IFRLSARNRAGAGEAYVKEISTTEDKPTGFPLNLKVTGLTQSSTQLTWEPPNLKERNGKI
THYLVVYRDINNQQDNTSSTEDTHLTIEGLNPDTTYDIRVQAFTSKGGGPLSPSIQSRTM
SNDFPTLNFGVKAVTKTSVLLTWDLPENHKSQAPFKILYNQQSVEVEGNQKRKLITQLQP
DTDYSFVLTSRGIIAGGLQQQVSIRTAPDLIKTKPITETPQGGKSTINLPKVQTTSRVRW
YYIVVVPQTESMQRWKNPDEMDLEELLRSREGPVLRRRRHVDSPRAYVAAKLAHLPETFT
LGDDKEYMGFRNKPLTNQQQYLCFVVAVLRNEGTDGAANYMTFSASPYSDPIHIEPDKAP
MTDPPEMLWVMGPVLAVVVIIIIVIAILLFKNKQERKRASPLPKDEHSGGVKDSLLANSS
DPVEMRRLNYQTPGPSSHRCPNTPRMREHPPIPVIDLADHIERLKANDGLRFSQEYESID
PGQQFTWENSNMEVNKPKNRYANVIAYDHSRVVLTSVDAVPGSDYINANYIDGYRKQNAY
IATQGPLPETLSDFWRMVWEQRANTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTML
DTVELATYSVRTFLLYKSGSTEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPD
AGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFI
HEALLEAATCGNTEVPARNLYAHIQKLTQPPSGETVTAMELEFKRLANSKAHTSRFISAN
LPCNKFKNRLVNIMPFESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETT
EDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILR
EFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCS
AGVGRTGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLG
SFDHYAT
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacattcacctggcagggcccctcctgcacagaggggcgttgctgctgctg
tttctgctcggctccaaggtcatctcctctctggcagacaacaggccacagtttatcaaa
acccctgaagaccagactggcgtctcgggcggagttgcatcatttgtctgccaggcctca
ggagagccaaggcctagaatcacctggatgaagaaaggcaagaaagtcagctctcagcgc
tttgaggtgattgaattcgatgatgggtcaggctccgtactgcggatccagccgctgcgc
acccacagagacgaagccatttatgagtgcacagccacaaacagcgttgacgagatccac
gccagtgccaagcttacagtgctggacgaggaccagattccacacggcttccccgtcatt
gacatgggtcctcagctgaaagtagttgaaaggacccggactgccaccatgttgtgcgct
gcaagtggtaatccggacccggagatctcctggtacaaggacatgctccccgtggacatc
aacagcagcaatgggcgcatcaaacagcttcgctcaggtggtacaccaattagaggagct
ctgcaaattgagaacagcgagatgtcggaccaggggaaatatgaatgtgtagccatgaac
agcgccgggacccggtactctgcacctgccaatctctatgtcagagaaccacgtgaagtg
cgaagagttcctcctagattctctattccacccaccaaccaagaggtgatgccaggtggc
agtgtcaacctgacatgcgtggcggttggctcacccatgccctttgttaagtggaccatg
ggtcagttggagctgaccaaggaggaggagttgccactgggccgcaacgtgctggaggtt
accaatatcagagagtcagccaactacacatgcgtggccatgtcttctttgggcgtgatt
gacgccacagcacaggttattgtcaaagccttaccgaagccccccacctccctcaccgtg
acagaaaccaccgccaccagtgtgactctcacatgggattctggaaacccagaacctgtt
tcctactacatgatccaataccgagccaaatcctcggacaacggcttccaagaggtagag
ggagtggcgaccacccgctacagcatcggtggcctcagtccctactcagagtacgagttc
cgcgtcatggccgtgaacaacattggccgtggcccgcccagcgaccctgtggaaacgcgt
accggtgagcaggcgccctcatcgccgcccctccacgtccaggcccgcatgctaagcgcc
agcacgatgctggtccagtgggaacctccggaggagccaaacggacagataagaggttac
cgggtgtactacagctctgacatgacggccccgctcagtgcatggcagaaacacaacacg
gacgacagcagcctgacaaccatctcagggctgacgcctgaaatcacctacagcctcagg
gtgctgggcttcacctctgtaggtgacggaccaccctctgacatcctgcaagtcaaaaca
cagcagggagttcctgctcagccgtccagcttcgaggcggaagcggagctcgacagtcgg
atctcactgtcttggctgtggccggtacaagaccaaatcaccaagtatgagctgcagtac
tgggaggccggctccgatagcaagaaacatgtgacgttcaacccggcgggctcctacgct
gtggatggtctaaagccggacactttgtactatttctccctggcagcccgctccgaaaca
ggtctgggtgtctacacccagcccatccaggcccgcactgctcagtccactccctccgcc
ccacctcaggaggttcacgtggtcagcctgacttccacaagcctcaaggtgagttgggtg
gcgccgcctgcagacagtcgccatggtgccatcgtgcgctacacaatcagctaccaggct
ccggcaggagaggacacggagcggcacgatgtatccgacatcggtgcggatgccaccagc
tatgtgctggaaggcctggagaagtggactgagtatgatgtgtgggtgagggcacacact
gatgtgggcccaggccccgagagtgtcccagtcaagataagaaccaaggaggatgtgcca
ggagcccctcccaggaagctggaggtggatgccataaactcaacagccatccgggttacc
tggaaacctcccgtccaggtgaaacagcatggacaaatcagaggctatcaagtcatcttt
tcgcggctggaaaacggtgaaccacgaggccagccgaacatcatggatgttgctttgcca
gaggctcagtggaatattgaagagtccaccgagcatgaagctattattggtggactacat
gctgaaaccacctactctgtcactgtggctgcttacaccaccaagggcgacggagctcgg
agcaaagctaaagtggtcactacaactggagcagtgccaggcaagccgactatgatgatc
agcaccaccatgggcaacacagcactgatccagtggcaacctcccaaggagatggtgggg
gagttgattggctaccagctgcagtacaagcgcacagatgaggaggctttcacctcactg
gagctgagcaaaactaaagaccaccacaccgtcaccgagctccacaaaggagcaacctat
atcttccgcctcagcgctcgcaaccgcgccggcgccggtgaggcctatgtgaaagagatc
agcaccaccgaagacaagccaaccggcttccccctcaacctgaaggtgaccgggctcacc
cagtccagcacacagctcacctgggaacccccaaacttgaaggaaagaaacggcaagata
actcactacctggtggtgtacagggacataaacaatcagcaagacaacaccagcagcaca
gaggacacgcacctcaccattgagggcctcaacccagacaccacttatgacatccgtgtg
caggctttcaccagcaagggcggtggacccctcagccccagcatccagagcaggaccatg
tcgaacgatttcccaacccttaactttggtgtcaaagccgtcacaaaaacatctgtgctc
ctcacctgggatttgccggaaaaccacaaatctcaggctccgtttaagattttgtataac
caacaaagtgtagaggtggagggaaatcaaaagaggaagttgatcacacagctgcagccg
gataccgactactcatttgtactgacaagcaggggcatcattgctggaggtctccagcaa
caggtgtccatccgcacggcccctgacctcatcaaaaccaaacccatcacagagacgcct
cagggtggcaaaagcaccatcaacctgcccaaagtacagaccaccagccgcgtcaggtgg
tattacatcgtggtggtgccgcagaccgagtcgatgcagcgttggaagaatccagacgaa
atggacttggaagagctgctccggtccagagaaggtcctgtcctgcgacgcaggcgccat
gtggactcccccagggcatacgtagcggccaagctggctcacctgccagaaacttttacg
ctgggcgatgacaaggaatacatgggattcagaaacaagccactgactaaccaacagcag
tacctctgctttgttgtggcggttctacggaatgaggggacggatggagcagctaattat
atgaccttctctgccagtccctactctgacccaatccatatcgaaccagacaaggcccca
atgacggatccacctgaaatgctgtgggtcatgggccctgtgctggcagtagtcgtgatc
atcatcatcgtcatcgccatcctcctctttaaaaacaaacaggaaagaaagcgggcgtca
cccttaccgaaagatgagcactcaggcggcgtgaaggactcgcttttagctaactcatcc
gaccccgtagagatgaggagactcaactaccagacaccaggtcccagctctcatcgctgc
cccaacactccaagaatgagggagcacccacctattcctgtcattgacctggctgaccac
atagagcgactgaaagccaatgatggcctccgcttttcccaggaatatgagtctattgat
ccaggccagcagtttacctgggaaaactccaacatggaagtgaacaagccaaagaatcgc
tatgcaaacgtcatcgcctatgaccactccagagtggtcctcacctctgttgatgctgtt
ccaggcagcgattacatcaacgccaactacattgatggctacaggaagcagaatgcctac
atcgccactcagggacctctgccagagactctgagcgacttctggagaatggtgtgggag
cagagggccaacaccattgtcatgatgaccagattggaagagaagtctcgggtgaaatgt
gaccagtactggccatcacgaggaacagagacctacgggatgatccaggtcaccatgttg
gacactgtggagctggcaacctacagcgtccgaacatttctcctctacaagagcggttcc
accgagaagagggaggtgagacagttccagttcatggcctggcccgaccacggggtgccc
gagtaccccacacccatcctggccttcctacggagagtaaaggcctgcaatcctccagat
gcaggacccatggtggtccactgcagtgcgggcgttggcaggaccggctgcttcattgtg
atcgatgccatgctggagcgcatgaagcatgagaagaccgtggatatttacggccacgtg
acgtgcatgcgttcccagaggaactacatggtccagaccgaggaccagtacatcttcatc
cacgaagcccttctcgaggccgccacctgcggcaacacagaggtgccagcacgcaacctg
tatgctcacatccagaaactcacacagcctccgtctggtgagaccgtcaccgccatggag
ttggagttcaagagactggccaactccaaagcgcacacatcacgcttcatcagcgccaac
ttgccctgcaacaagttcaagaaccggctggtcaacatcatgccttttgagtccacccgc
gtctgcctgcagcccattcgcggcgtcgagggatcagactacatcaacgccagctttatt
gatggctacagacagcagaaagcctacattgccacgcagggcccactggctgagaccact
gaggatttctggaggatgctgtgggagcacaactccaccatcgtggtcatgctcaccaag
ctacgagagatgggccgggagaagtgccatcagtactggccagcagagcgatccgccagg
taccagtactttgtggtggatccgatggccgagtacaacatgcctcagtacatcctcaga
gagttcaaagtcacagatgccagggatggacaatccagaacaatccgccaattccagttc
actgactggcccgaacagggagtgccaaaaactggagagggcttcatcgatttcattgga
caagtgcacaaaactaaggagcagtttggacaggacggaccaatcactgtacactgcagt
gccggggtaggcaggaccggagtcttcatcaccctcagcatcgtcctggagcggatgagg
tacgagggcgtggtggacctcttccagacggtgaagacgctccgcacccagcggcctgcc
atggtgcagactgaggaccagtaccagctgtgctacagggccgcactggagtacctggga
agctttgaccactatgcaacgtaa
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integrated database retrieval system
