Cyprinodon variegatus (sheepshead minnow): 107085985
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Entry
107085985 CDS
T06110
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04260
Cardiac muscle contraction
cvg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107085985
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107085985
04261 Adrenergic signaling in cardiomyocytes
107085985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107085985
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107085985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
107085985
NCBI-ProteinID:
XP_015232177
Ensembl:
ENSCVAG00000010187
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MDYSLCLLVLLTTVSVSHGQFPTPQMVKDWVEQIQKELITLTDKASGLQDLIEIYKKHRT
HFSVESNNATELVATASKNIEQLLANRSDALKRLATEAERLQKEHEWRVDSDPNKLLYYN
AKDGMNRTSLEKEQETEEEKRNRFIPDDFEIDPTFKRHVSYNTTAVHIPTDIYEGSTIIL
NELNWTDALDDVFRKNKEEDESLLWQVFGSATGLARYYPASPWIDKRSAPDKIDLYDVRR
RPWYIQGAASPKDMLILVDASGSVSGLTLKLIKQSVHKMLETLSDDDFVNVVSFNKTAKP
VACFEHLVQANVRNKRILKDAVQKLKAEGITNYTSGFELAFAQLAQANVSRANCNRIIML
FTDGGEERAEEIFQKYNPKQEVRIFTFSVGQHSYDKGPIQWMACNNKGYYYEIPSIGAIR
LNTQEYLDVLGRPMVKADSRSKRKSKAKEVQWTNVYLDALELGLVITGTMPVFNKTNTGS
KKSQNQLILGVMAIDVSLEDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLQPLTAKFDE
PVTLDFLDAELENDIKVEIRTKMINGKTGKYTISTLVKSHDERYIDQGQRTYTFAPVNGT
DYSLALVLPDYSMKYIRAKIGDTITQAKWKEVSESLLADNFDEYGYTFIAPRMYCTDLKP
PDKETNNTEFLMDFNNYIDTRTPNDPSCNVELVNRLLLDAGITADLVKFWKQNEFEQGIV
ARFVATDGGITRVFPKSAGLDWKEEAETYESSFYKRSLDNDLYMVKPTRYNESDKNVLVS
RAVNLNIDGFTLKPAVVGVKLDIYQWMESFISIEYWKNCKNEICGCRKDDPYIHCVLLDD
GGFMVMSNQVDDLDQIGQFFGVIDPDLMRALVNSSLFTAKSTYDYQSLCEPKRESKAAAG
LRSIYVPTIADILNLGWWATAAAWSIVQQLLVSITLPNVLDAAEMDDTESDAMTKEVCIT
EQTQYFYENKDSSFEGSFECANSTRQYLAEKVPNTNLVFIISDRQQGDSQSFCTPKLVQE
EQASDGPDACEMALRPRHRKGPMNCFDQTEHEEGLDCGGASSLNPSIWLMAIIQVVLLWV
ATDSRHHAIPS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggattactccctctgtttgttggttcttctgacgaccgtgtctgtttcgcacggacaa
ttcccaacaccccagatggtaaaagactgggtggagcagattcaaaaagagttgatcaca
ttaacagacaaagccagtggattgcaggacctaatagagatatataaaaaacacagaacc
cactttagtgtggaatccaacaatgccacagaactggtggcaacagcttcaaagaacata
gagcaactgctggctaaccgctctgacgccctaaagagacttgcgactgaggctgaaagg
ttacaaaaggaacatgagtggagagtcgacagtgatcccaacaaactcctttactacaat
gccaaggatggtatgaataggacctctttggagaaagaacaagagacagaagaggagaag
agaaaccggttcattcctgacgactttgaaatagacccgacctttaaacgccacgtctcc
tacaacaccactgccgtccacatccctacagacatatatgaaggctccaccattatttta
aatgagctaaactggacagatgccttggatgatgttttccggaaaaacaaagaggaagat
gagtcactgctatggcaggtatttggctctgcaactggactggctcggtattacccagcc
tccccctggatcgacaagagaagtgcgcctgacaagattgacctgtatgacgtacgcagg
cgaccttggtacattcagggggcggcgtcacccaaggacatgctgatcctggtagatgcg
agtggaagtgtttctggtctcacccttaaactgatcaaacaatccgtccacaagatgctg
gagaccctctctgatgatgactttgtaaacgtggtttctttcaacaaaaccgccaagcct
gtagcatgctttgagcacctggtgcaggccaatgtgaggaacaaaaggatcctgaaggat
gctgtgcagaagcttaaagctgagggcatcaccaactacaccagtggctttgagcttgcc
ttcgcacagcttgcacaggccaatgtgtcgagggccaactgtaacaggattataatgctg
ttcactgatggaggagaagagagagcggaggagatctttcagaaatacaaccctaagcaa
gaggtgcgcatttttacattctcagtgggtcagcacagctacgacaaagggccaatacag
tggatggcctgcaataataaaggttactattatgagattccatctattggggccattcgg
ctgaatactcaggagtacttggatgttttgggtcggccaatggttaaagctgacagcagg
tccaagaggaaaagcaaggctaaggaagttcagtggacaaacgtctacctggatgcactg
gagcttggtcttgtaatcacaggaactatgcccgtcttcaacaagaccaatacaggctca
aagaagtcacaaaaccagctcatcctgggagttatggctattgatgtctccctggaagat
atcaagagacttactcctcgtttcacatttggtccaaatggctactactttgctattgat
ccaaatggctatgtgttgctccaccctaatcttcagccactgactgctaagtttgatgag
cctgtaacactcgactttctggatgcagaattggagaacgacatcaaagtggagataaga
actaaaatgataaatggaaaaacagggaaatacactatatctacattggtgaaatctcat
gatgagcgctacattgaccaaggtcagaggacctacacctttgctcctgtgaatggaaca
gactacagcctggccttggttctaccagactacagcatgaaatacatccgtgcaaaaata
ggcgacacaataacccaggcaaaatggaaagaggtttctgagagcctgcttgctgacaat
tttgatgaatatgggtacacattcattgcaccaagaatgtactgcacagacttaaagcct
cctgacaaggaaacaaacaacacagagttcctgatggactttaacaactatatcgataca
aggactccaaacgatccttcgtgtaatgtagagcttgtgaacagacttctccttgatgcc
ggtatcactgctgatttggtcaaattctggaaacagaatgagtttgaacaaggtatcgtt
gccagatttgtagcaactgatggaggaatcactcgcgtcttcccaaaaagtgcagggttg
gactggaaagaagaagcagagacctacgagtcaagtttctacaagcgaagtttagacaat
gatctgtacatggtcaaaccaactcgctacaatgaaagtgataaaaatgtccttgtgagc
cgagcagtaaacctaaacattgatggttttacactcaaaccagctgttgttggtgtaaag
ttggacatctatcaatggatggagagcttcatcagcatcgagtattggaagaattgcaaa
aatgagatctgcggctgtaggaaagatgatccgtatatacactgtgttctgctggatgat
gggggattcatggtgatgtccaatcaagtggacgatctcgatcagatcggccagttcttt
ggcgtcattgaccctgaccttatgagagctttggtcaactcgtcactgttcaccgcaaag
agcacctatgactaccagtctctttgtgagcccaagagagagagcaaggcggctgcaggc
ctgcgatcaatctatgtacccacaatagcagatatattaaacttgggatggtgggcaaca
gctgcagcctggtcaattgtgcaacagctgctggtcagcatcacactcccaaatgttctg
gatgcagctgaaatggatgacacagagtctgatgcaatgactaaggaggtgtgcattaca
gagcaaactcagtacttctatgaaaacaaggattcatcttttgaagggtcatttgagtgt
gcaaactccaccaggcaataccttgctgaaaaggtgcccaacacaaacctggtctttatc
ataagtgacagacaacaaggtgacagccagtcattttgcacgcccaagttagtacaggaa
gaacaggcatctgatgggccggatgcctgcgaaatggctctcagacctcgccacaggaaa
ggccctatgaattgttttgatcaaaccgagcacgaggagggccttgactgtggtggggca
tccagcctgaatccatcgatttggctgatggcgatcattcaggtggttttgctctgggtc
gcgaccgactccaggcaccatgccattccatcatga
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