Cyprinodon variegatus (sheepshead minnow): 107086022
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Entry
107086022 CDS
T06110
Symbol
flnc
Name
(RefSeq) filamin-C isoform X1
KO
K27393
filamin-C
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107086022 (flnc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107086022 (flnc)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107086022 (flnc)
Intermediate filaments
Intermediate filament-binding proteins
107086022 (flnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
Y_Y_Y
DUF5060
CH_2
Motif
Other DBs
NCBI-GeneID:
107086022
NCBI-ProteinID:
XP_015232226
Ensembl:
ENSCVAG00000008703
LinkDB
All DBs
Position
Unknown
AA seq
2742 aa
AA seq
DB search
MMSNSYGEEQLPPQYYQATDFGEEEEDEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKC
VNKTITDLQKDFSDGLKLISLLEVLSQKKMYRKHHSRPNFRQMKLENVSVALEFLDREHI
KLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDDEDDEETKKLTPKQRLLGWIQNK
VPQLPINNFNRDWRDGKALGALVDNCAPGLCPDWAEWDPNKPVDNAREAMQQADDWLGVP
QVIAPEEIVDPDVDEHSVMTYLSQFPKAKLKPGAPLRNKQLFPDKVKAYGPGIEPHGNKV
LQPAVFTVETLEAGSGEVLVFVEDPEGHKEEAKVKPNKDKYGTYTVTYLPKVEGVHKVKV
LFAGQDIKKSPYSVNVEKDMGDPNKVHARGPGLDATGNVANKPTYFDIYTAGAGTGDISV
VIVDPQGKKDTVELILENKGDSVFRCTYRPIMEGPHSIHVLFAGQEIPKSPFNVNIAEAP
QVAPPAGAPLQIVPQSVRTPPGVKGAPPPKPGRPTINPNACRATGRGLQPKGVRVKEVAD
FKVFTKGAGTGALHVSVKGPTGVEEQVKVRDAGNGVYECEYYPMRPGKYTVSITWGGQPI
SRSPFEVEVGEEAGVQKVRAWGPGLKTGMVGKSADFVVEAIGTEVGTLGFSIEGPSQAKI
ECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILPAANDVFPEKVKAFGPG
LQPTGVIVNKPTEFTIDARMAGKGQLKIYAQDAEGCTFNIKITDRGDGTFLCAYTPIKPI
KHTIIITWGEVNVPNSPFRVLVGEGSHPDKVKVYGPGVEKTGLKANEPTYFTVDCGEAGQ
GDISIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGPGRYTIMVLFADQEIPISP
FKVKVDPSHDAGKVRAEGPGLNKTGVEVGNPTHFTIYTKGAGKAKPEVHFTTSTPGEAVR
DFEIIDNHDYSYTVKYTALQQGNMAIAVTHGGDPIPKSPFQVTVSPALDIGKVKVEGLDT
KVEVGRDQEFTVNTKGAGGQGNVGVKMTSPSGRPIPCKLESDKAKGTHGVKYIPPEEGQY
KVDVTYDGNPVMGSPFGVEAVMPADPSKVRAFGPGLKGGIVGKPAPFTIDTKGAGAGGLG
LTVEGPCEAKIECQDNGDGTCSVSYLPTEAGEYAINILFAEQHIPGSPFKAAICPAFDPS
KVTASGPGLEKAKAGEPATFTVDCTRAGEGELTIEIVSETGIKAEVHIQKTSEGTFSVTY
IPSFHGTHTITIKYGGHAIPYFPKVLQVEPSVDTSGVHVYGPGVEPRGVLREVTTHFIVD
ARALSKVGGNRVQVHIINPSGANTDTYITDKGDGTYRVEYTAFEDGMHLIEVLYDAAAVP
KSPFRVFVVEGCDPTRVRAFGPGLEGGITNRPNCFTVETRGAGTGGLGLTIEGASEAKIS
CKDNKDGSCSVEYVPFTPGDYDVNINYGGQPIPGSPFRVPVKDPVDPTKVKCSGPGLGAG
VRAHVPQTFTVDCTQAGQAPLDVKLYGPTGSVEPVGVKNNGDGTHTVHYTPAQDGPYTVA
VKYADQEVPHSPFKVMSQPGHDASKVRASGPGLDTKGVPASLPVEFTIDARDAGEGLLTV
QILDPEGKPKNATIQDNRDGTYTVSYVPDSTGPYTITIKYGGDEIPYSPYRIQSLPTGDA
SKCRLTVSIGGHGVSSLQKLQTSEDTVITVDAKAAGKGKVTCKVLTPQGMELDMDVVENH
DGTFDIYYTAPEPGKYVITIRFGGENIPKSPFHVVASNEPVVPRDPVDPLFRPVNFLVPF
MPQQGEITGEVRMPSGKTARPHITDNKDGTITIKYQPTERGLHEMDIKYEGNHIPGSPLQ
FYVDAVNSGVVTAYGPGLSYGMVNRAATFTVVTKNAGEGGLSLAVEGPSKAEITCKDNKD
GTCTVSYLPTAPGDYNIIVKFDNKHIPGSPFTAKITGDDSITRTSQLNVGTSADVSLKIA
ETDLSSLAASIRAPSGNEEPCLLKRLPNRHLGISFTPKEVGEHEVSVRKNGMHVANSPFK
IMVGQSEIGEASRVKAFGKGLVEAHTFEMAEFFVDTRNAGYGGLALSIEGPSKVDINCED
VEDGTCRVTYCPTEPGSYVVNIKFAEKHIPGSPFSVKVTGEGRIKESITRKRQASSIASV
GSTCGLNLKIPGNWFQMVSAQERLTRTFTRSSHTYTRTERTEISKTRAGETKREVRVEES
TQVGGGGSPFRDVFGDFLGRESLSSFAGITARPEPAESGSQAMTAQVTSPSGKTVDADIV
DGGSSTYSVRFIPQEIGPHTVNVKYRGQHVPGSPFQFTVGPMGEGGAHKVRAGGPGLERG
VAGAPSEFSIWTREAGAGGLSIAVEGPSKAEISFEDRKDGSCGVSYIVKEPGDYEVSIKF
NNEHIPDSPFIVPIATLSDEARRLTVTSLQEKDLKVNQEASFMVQRNGARGAVDAKVHTP
SGSSEECYVTDLDGDKSSIRFIPRENGVHSIDVKFNGCHIPGSPFNVRVGDPGLIADPGM
VTAHGAGLLGGTTGVPSEFVVNTCNAGSGALSVNIDGPSKVKMDCRECPEGYRITYTPMA
PGNYLITIKYGGPQHIVGSPFKAKITGARLSGGHSLHETSSVLVETVTKTAKVGAAYSSS
SSATSAALKCDASKVVCRGAGLSKALVGQKNNFTVDCSKAGTNMLMVGVHGPQAPCEEVY
VKHMGNKMYNVTYTVKDKGSYTVIVKWGDDNVPGSPYKVTAP
NT seq
8229 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaacagctacggcgaggagcagctgcctcctcagtactaccaggccacggac
tttggggaggaggaggaggacgagatgccggccacggagaaggacctggccgaggacgcg
ccgtggaagaagatccagcagaacaccttcaccaggtggtgcaacgagcacctgaagtgc
gtcaacaagaccatcaccgacctgcagaaggacttcagcgacgggctgaagctcatctca
ctgctggaggtgctgagtcagaagaagatgtacagaaagcatcacagcaggcccaacttc
cgtcagatgaaactggaaaatgtttctgtggctttggagtttctggacagggagcacatc
aagctggtctcaatagacagtaaagcgattgttgatgggaatctaaagctgatcctgggt
ctcatatggacgctcatcctgcactactccatctcaatgcccatgtgggacgacgaagat
gatgaggagaccaagaagctgacccccaagcagcgcctgttgggctggattcaaaacaag
gttccccagctgcccatcaacaacttcaaccgagattggcgagacgggaaagcccttgga
gccctggtggacaactgcgccccgggtctgtgtcccgactgggcagagtgggacccaaat
aagcccgtggacaatgcaagggaagccatgcagcaggccgatgattggctgggcgtgcct
caggtgatcgctcctgaggaaatcgtggacccagatgtggacgagcactcggtgatgaca
tacctgtctcagtttcctaaggccaaactgaaaccaggcgctcctcttagaaacaaacag
cttttcccagacaaggtcaaagcctacggaccaggtattgagcctcatggcaacaaagtt
ctgcaacccgctgtgttcacagtggaaacactggaggctggcagtggagaggtcttggtg
tttgttgaggatcctgaaggacacaaagaggaggctaaagttaagcccaacaaggataaa
tatggaacctacacagtcacctatcttccaaaagtggagggtgtccacaaggtgaaggtg
ttgtttgcaggtcaggacatcaagaagagcccctactctgtcaatgtggagaaagatatg
ggcgaccccaataaagtgcacgccaggggccccggtttggatgctacaggcaatgtggcc
aacaaacccacctactttgacatctacacagctggcgctggtactggcgacatcagtgtg
gtcatcgttgatccccagggcaaaaaagacaccgtggagctgattctggaaaataagggc
gacagcgtattccgttgcacctatcgccccataatggaggggcctcacagcatccacgtg
ctgtttgcaggccaggagatccccaagagccccttcaatgtcaacattgcagaggctcca
caagttgctcctcccgcaggagctccactgcagatagttcctcagtcagtgcgcacccct
cctggagtgaagggggctcctccccctaaacctgggcgtccaacgataaatcccaatgca
tgcagagctactggcagagggctccagcctaaaggcgtaagggtgaaggaggtggcagac
ttcaaagttttcaccaaaggagctggcaccggtgctctgcatgtctctgtcaaaggacca
actggcgtggaggagcaagtcaaagtgagagatgcagggaatggagtgtacgagtgtgaa
tattaccccatgaggcctggtaaatacacagtgagcatcacctgggggggccagcccatc
tcacgcagcccctttgaagtggaggtgggagaggaagctggtgttcagaaggtgagggcc
tggggcccaggtctgaagactggcatggtgggaaaatccgctgattttgtggtcgaggct
atcggcactgaagtaggaactctgggcttctccatcgaaggtccatcacaagctaaaatc
gagtgtgatgataagggcgacggctcttgtgatgtgcgctactggcccactgagccaggt
gactacgctgtccacgtcatctgtgatgatgaagacatcaaggacagccccttcatggcc
cacatcctccctgctgctaacgatgttttcccagagaaggtgaaagccttcgggccagga
ctgcagccgaccggggtcattgtaaacaaacccaccgaattcaccattgacgcccgcatg
gctgggaagggtcagcttaagatctacgcacaggacgctgaaggctgtaccttcaacatc
aagatcactgacaggggagatggcacgtttctgtgtgcctacactcccatcaaacccatc
aaacacaccatcattatcacctggggggaggtcaatgttcccaacagccccttcagggtg
ctggttggagagggctctcatcctgacaaagtcaaggtctatgggcctggagtggagaag
acggggctcaaagctaacgagccaacatacttcactgtcgactgcggcgaagctggccaa
ggagacattagcatcggaatcaagtgtgctccgggggtggttggacctgcagaggctgac
atcgacttcgacatcatcaagaatgacaatgacaccttcactgtcaaatacacccctcct
ggtccgggccggtacaccatcatggtgctgtttgctgaccaggaaattcctatcagtcca
ttcaaagtcaaagtggatccctcccatgatgccggcaaagtgagagcggagggtcctgga
ctcaacaagacaggtgtcgaagtgggcaatccaacccacttcacaatttacaccaaggga
gctggaaaagccaagcctgaggttcattttacaacatcaactcctggagaggcggttcgt
gacttcgagatcatcgataaccacgattactcctacactgtcaagtacacggctcttcag
cagggaaacatggctattgctgttactcatggaggagatcccatcccaaaaagtcccttt
caagtcacagtatcaccagcattggatattggaaaagtgaaagtggagggcttggacaca
aaagtggaggttgggagggatcaggagttcaccgttaacacaaagggagcaggcggccag
ggcaacgtaggagttaagatgacgtctccctccggccggccaatcccatgcaaactggag
tcagataaagccaaaggcactcacggtgtgaagtacattcctccagaggaagggcagtac
aaggtggatgtcacctatgatggaaaccctgtgatggggagcccctttggggttgaagct
gtcatgccggcagatccttcaaaggtgcgagccttcggcccaggccttaagggtggcatt
gtgggtaaaccagctcccttcaccattgacacaaaaggagctggggcggggggccttggc
ctgacagttgagggtccctgcgaggccaaaatcgagtgccaggacaacggcgatgggaca
tgctcagtgtcatatcttcccaccgaggctggcgagtacgctattaacatcctgtttgct
gagcagcacatccctggctctccctttaaagccgccatctgcccagccttcgaccccagc
aaggtgacagctagcgggccaggcctggagaaggccaaggcgggtgaaccagccaccttc
acagtggactgcacaagagcaggcgagggagagctcaccatcgagattgtgtctgaaact
gggatcaaagctgaagtacacatccagaaaacatccgaggggactttctccgtcacgtac
atcccatccttccacggcacgcacaccatcactatcaagtatggcgggcacgctattcct
tacttcccaaaggtcttgcaggtggaaccctctgtggacacaagtggggttcacgtttat
gggcctggagtggagccaagaggggtcctgagggaagtcacaacccacttcattgtggat
gcacgtgccctcagcaaggttggaggcaaccgtgtgcaagttcatattatcaacccctcc
ggcgccaacacggacacctacattactgacaagggagatggcacttacagagtggagtac
acagcctttgaggacggtatgcatctgattgaggtactttatgacgccgcagcggttcct
aagagcccctttagggtgtttgtggtggaagggtgtgatccgacccgtgtgcgcgcattt
ggaccgggtctggagggaggaataaccaacaggccgaactgtttcacagtggaaacgagg
ggtgcaggcacagggggcctgggtctgaccatcgagggagcctcagaggccaaaatatcc
tgcaaagacaacaaagatggcagctgcagtgtggagtacgttcccttcactcctggagat
tatgacgtgaatatcaactacggaggccagccgatccctggcagcccgttccgtgtaccg
gtgaaggacccggtggatccaaccaaggtgaaatgttctggaccaggtctgggcgctgga
gtgagggcgcatgttccccagactttcacagtagattgtacgcaggctggacaggcccca
ctggatgtcaaactctacggaccaacaggcagtgtggagcctgtaggtgtgaagaataac
ggtgacggcacccacacagtgcactacaccccagcgcaggacggcccctacactgtagct
gttaaatatgcagatcaggaagtcccacacagccctttcaaggtaatgtctcagcctggg
cacgatgccagcaaggtccgcgccagtgggcctggtctagacaccaaaggcgtgcctgcc
agcctgcctgttgagttcacgattgatgctcgggatgctggagaaggattgctcactgtg
cagattctggacccagagggaaagccgaagaacgcaaccatccaagacaacagggatgga
acctacactgtttcctatgtgcctgattctactggcccttacacaatcaccatcaaatac
ggaggagatgaaattccctattctccatatcgaatccagtcgcttcccacaggggacgcc
agcaagtgtcgccttacagtttcaataggaggacatggagtttcgagtctccagaagctg
cagacctctgaggatacagtcatcacagtggatgccaaggcagccggaaagggcaaggtg
acctgtaaggtgctaacgccacaggggatggagttggacatggatgtggtggagaatcac
gacggtacctttgacatttactacacggcccccgagcctgggaagtatgtcattaccatc
cgcttcggcggggagaacatcccaaagagtcccttccatgtggtggcgtccaatgaacca
gtggtccctcgcgaccctgtggatcccctttttcgtccggttaacttcctggtgccgttc
atgccacagcaaggagagatcacaggtgaggtgcggatgccctctgggaagaccgcccgc
ccacacattactgacaacaaggatggcaccatcacgatcaagtaccagcccacagagagg
ggcctgcatgagatggatatcaaatatgaaggaaatcatattccaggaagccccctgcag
ttctatgtggatgctgtgaacagcggagtggtgactgcttatggtccaggtctgagctat
ggaatggtcaacagagctgctactttcactgtggtcacgaagaatgcaggagaaggtggt
ctctcacttgcagttgagggtccctccaaagccgagatcacgtgtaaggacaacaaagat
ggcacctgcaccgtgtcctaccttcccactgctccaggagactacaacatcatcgtgaag
tttgacaataagcacattcctggcagcccctttactgctaagatcacaggggatgacagc
ataaccagaacttcccagcttaacgtcgggacttcagccgacgtgtcgctgaagattgca
gagactgatctgagctctctggctgccagcatcagagctccttctggaaacgaggaaccc
tgcctgctcaaaagactgcccaacagacaccttggcatatctttcaccccgaaggaggtt
ggcgaacatgaagtgagcgtgaggaagaatgggatgcatgtggcgaacagccctttcaaa
ataatggtcggccagtcagagatcggtgaagccagcagagtgaaggccttcgggaaagga
ctggtcgaggcgcacactttcgaaatggccgaattctttgtggacaccaggaacgctggt
tacggcggtctggcgttgtcaattgagggtccaagcaaagtggatataaactgtgaagat
gtagaggacgggacgtgcagagtgacctactgtccaacggaacccggaagctacgtcgtt
aacatcaagtttgctgaaaagcacatccctggaagtcctttctctgtgaaggtgactgga
gagggaaggattaaggagagtattaccaggaagagacaggcttcatctattgcctctgtg
ggcagcacttgcggccttaacctcaagatcccaggaaactggttccagatggtttccgct
caggaaaggctaacacggacattcacccgtagcagccacacgtacactcgcactgagcgc
acagagatcagtaagacccgcgcaggggagactaagagggaggtgcgggtggaggagagc
acccaggtgggaggaggaggaagccccttcagggatgtgtttggagactttctgggcaga
gagagcctcagcagctttgctggcatcactgcgagacctgagccagctgagagcggatct
caggccatgacagctcaggtaacgagccccagtgggaaaacggtggacgcagacatcgtg
gacggaggaagcagcacatacagtgtccgcttcataccccaggagatcggacctcacact
gtgaacgttaagtacaggggccagcatgttcccggcagccctttccagttcactgtaggg
cccatgggggaaggcggagcccacaaggtccgtgcaggaggtccaggtcttgaaagaggc
gtggctggagcaccatctgaattcagtatctggacccgagaggcaggagccggtggcctg
tccatcgccgtcgaaggcccaagcaaggctgaaatctcctttgaagataggaaagacggc
tcctgcggcgtttcatacatagtgaaggagccgggtgactatgaggtgtcaatcaaattc
aacaacgagcacatccctgacagcccgttcatcgttccaatcgctacgctgtcagatgag
gcccgcaggctcactgtgacaagcctgcaggagaaagacttaaaggtaaatcaggaggct
tccttcatggtgcagcgtaatggtgcccgaggcgcggtcgacgccaaagttcacacgcct
tccggatcatctgaggagtgctacgtcactgatctcgatggcgacaagagctcgatccgc
ttcattccacgcgagaacggcgtccactccatagatgtcaaattcaatggctgccatatt
cctggaagcccctttaacgttcgagtgggagatccaggtctgattgctgatcctgggatg
gtcactgcgcacggcgccggcctgctggggggaaccacaggggtgccctctgagttcgtg
gtcaacacctgtaacgccggctcaggcgctctgtccgtcaacatcgacgggccttccaag
gtgaagatggactgtcgggagtgtccagaaggctacaggatcacatacacgcccatggcg
cccggcaactatctgatcaccatcaaatacggcgggcctcagcacatagtgggcagcccc
ttcaaagccaaaatcacaggagcgcgtctgtcagggggacacagcctccacgagacctcc
tccgttttggtggaaactgtcacaaagaccgccaaagtcggcgccgcctacagctcgtcg
tcctccgctacttcagcagcactgaaatgtgacgccagcaaggttgtttgtcgtggagcg
ggactgtctaaagctttggtcgggcagaaaaacaacttcactgttgactgcagcaaagca
ggtaccaacatgctgatggtgggtgtgcatggaccccaagctccatgtgaggaggtttat
gtcaaacacatgggaaacaagatgtacaacgtcacctatacagtcaaggataaaggcagt
tataccgtcattgtcaaatggggagacgacaatgtcccagggagcccctacaaagtgacc
gcaccttaa
DBGET
integrated database retrieval system
