Cyprinodon variegatus (sheepshead minnow): 107086107
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Entry
107086107 CDS
T06110
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 18-like
KO
K08632
a disintegrin and metalloproteinase with thrombospondin motifs 18 [EC:3.4.24.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107086107
Peptidases and inhibitors [BR:
cvg01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
107086107
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Ortholog
Paralog
GFIT
Motif
Pfam:
ADAMTS_spacer1
ADAMTS_CR_2
TSP_1
Reprolysin
TSP1_spondin
ADAMTS_CR_3
Reprolysin_2
TSP1_CCN
Reprolysin_5
TSP1_ADAMTS
Reprolysin_4
TSP1_CFP_C
Reprolysin_3
CxC6
Motif
Other DBs
NCBI-GeneID:
107086107
NCBI-ProteinID:
XP_015232340
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MCSKYRSCTINEDTGLGLAFTIAHESGHNFGMIHDGEGNPCRKTEGNIMSPTLAGNNGVF
SWSTCSRQYLSRFLGTAQASCLGDEPKQIGQYKYPEQLPGQLYDADTQCKWQFGSKAKLC
GLDFVKDICKSLWCHRVGHRCETKFMPAAEGTTCGPDMWCRRGQCVKYGEHGPRAIHGQW
SAWSQWSDCSRTCGGGVMYRERSCTNPRRGRCLQLLNCEFWDQRDKRWCRRGQCVKYGEH
GPRAIHGQWSAWSQWSDCSRTCGGGVMYRERSCTNPRPENNGRFCPGSSRHNQLCNTRPC
PFNALDFRAQQCAEYNSKPFRGWYYKWKPYTKVDEEDICKLYCIAEDFDFFFAMSSKVKD
GTSCSDQREGVCIDGVCEAVGCDGILGSKASLDACGVCKGDNSTCKFLKGQYTLQHRANE
YYSMVTVPAGARSIHVQEMEVSTSYLAVRSLKKKYYLTRDWTVDWPGRFYFGGTVFNYQR
SFNKPESLYAAGPTNETLVFEVSRHFHW
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtaagtacaggagctgtaccatcaatgaggatacagggctgggcctggctttc
accatcgctcacgagtctggacacaattttgggatgatccatgatggcgaaggaaaccct
tgccgtaagacagagggcaacatcatgtctccaacattggctggtaataacggagtcttc
tcctggtccacctgcagtcggcagtacctcagccgcttccttggaacggcccaggcatcc
tgcctcggagacgaaccgaagcagatcggtcagtataagtatcctgagcagcttcccggg
cagctgtatgacgcagacacgcagtgcaaatggcagtttggatcaaaggccaaactttgc
ggcctcgatttcgtcaaggacatctgcaagtctctgtggtgtcaccgagtgggacatcga
tgtgagaccaagttcatgcccgctgcagagggcaccacctgtggtccagacatgtggtgt
cgaaggggtcagtgtgtgaaatacggggagcatggaccgagggccatccacggccagtgg
tcggcctggtcccagtggtctgactgctccagaacatgcggaggaggggtcatgtacagg
gaacgatcctgcaccaacccgaggagaggccgctgtctgcagctgctaaactgtgagttt
tgggatcagcgagacaagaggtggtgtcgaaggggtcagtgtgtgaaatacggggagcat
ggaccgagggccatccacggccagtggtcggcctggtcccagtggtctgactgctccaga
acatgcggaggaggggtcatgtacagggaacgatcctgcaccaacccgaggccagaaaac
aatggtagattttgcccgggatcaagtcgacacaaccagctgtgtaacactcggccctgc
cctttcaatgcgttggacttccgggcccaacagtgtgctgagtacaacagcaaacccttc
agaggctggtactacaagtggaagccttacaccaaagtggacgaggaggacatctgtaaa
ctctactgcattgcagaagattttgactttttctttgccatgtcgagcaaagtgaaagac
ggcacctcctgctccgaccagagagaaggtgtctgcattgacggagtgtgtgaggctgtg
ggttgtgatggcatattgggttccaaggcctcccttgatgcctgtggggtctgtaaagga
gacaactccacttgcaagtttttaaagggccagtacacacttcagcaccgggctaatgag
tattactctatggtgacagtgccagctggagcaaggagcatccatgtccaggaaatggag
gtgtccaccagctacctggctgtccgttccctgaagaaaaagtactacctgaccagggat
tggactgtggattggccagggaggttctattttggtgggactgtcttcaattatcagcgt
tctttcaacaagccggagagcctttacgccgctggccccactaacgagactctggtgttt
gaagtaagccgccactttcattggtga
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