Cyprinodon variegatus (sheepshead minnow): 107087627
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Entry
107087627 CDS
T06110
Symbol
mtr
Name
(RefSeq) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00270
Cysteine and methionine metabolism
cvg00450
Selenocompound metabolism
cvg00670
One carbon pool by folate
cvg01100
Metabolic pathways
cvg01230
Biosynthesis of amino acids
cvg04980
Cobalamin transport and metabolism
cvg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
107087627 (mtr)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
107087627 (mtr)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
107087627 (mtr)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
107087627 (mtr)
04980 Cobalamin transport and metabolism
107087627 (mtr)
Enzymes [BR:
cvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
107087627 (mtr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S-methyl_trans
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-GeneID:
107087627
NCBI-ProteinID:
XP_015234787
Ensembl:
ENSCVAG00000000233
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MAPTNVRYQLPAAAGCGSAVEAELRSLLQQRIMVLDGGMGTMIQLEKLEEEDFRGEEFKD
HPLPLKGNNDLLSITQPHIIYKIHQEYLQAGADIIETNTFSSTCVAQADYGLERLAYRLN
RASAELARRAADDVTKQSGWKRYVAGALGPTNKTLSVSPSVEKPDYRNITFDELVEAYTE
QARGLLDGGADILLVETVFDTANAKAALFAIDLLFEKTHRRTPILVSGTIVDRSGRTLSG
QTGEAFVVSVSHAKPLCIGLNCALGATEMRPFIEAIGKSTTAFVICYPNAGLPNTFGGYD
ETPQVTASSLKEFAADGLVNIVGGCCGTTPAHIRAISEAVKACKPRVPPVDAFKDHLLLS
GLEPFRIGPYTNFVNIGERCNVAGSRRFAKLIMAGQYEEALSIAKAQVEMGAQVLDINMD
EGMLDGPAAMARFCNFIASEPDVARVPLCIDSSNFSVIEAGLKCCQGKCIVNSISLKEGE
QDFLLRAAAVKRYGAAVVVMAFDEEGQATGTERKVEICTRAYELLVSKVGFDPNDIIFDP
NILTIGTGMEEHNDYAVSFIRATRLIKETLPGARVSGGLSNLSFSFRGMEAIREAMHGAF
LYHAIKDGMDMGIVNAGNLPVYDDIDKELLTMCENLIWNKEADATDRLLAYAQNIVKGGK
KVVQTDEWRNACVEERLEYALIKGIDKHVVDDVEECRAQVDRYKRPLHIIEGPLMNGMKV
VGDLFGAGKMFLPQVIKSARVMKKAVGYLIPFMEKEREEMMAASGSAEETMFSHIQRISP
ACSVCCRVIDLGVMVSCDRILREAVTQKADIIGLSGLITPSLDEMIYVAKEMERLAMTTP
LLIGGATTSKTHTAVKIAPCYSCPVVHVLDASRSVVVCSQLLEEGAREEYFEDVKEEYED
IRQEHYDSLKERRYLSLSEARQKALRADWAAAPRPVRPQFLGTRVFECYDLNGLLDFIDW
KPFFDVWQLRGKYPNRGYPKIFNDKTVGAEARRVFDDAQSLLHRMIDSRSLEGRGLVGFW
RAQSVGDDINVYEDDDDVVRSDVKPIATLHGLRQQAEKDGSSSEPFLCVSDFVAPVESGV
ADYIGMFAVGVFGAEELSQQFQTQGDDYSSIMVKALADRLAEAFAEELHARVRKELWGYS
SDEALQASDLHRVRYQGIRPAAGYPSQPDHTEKLVMWSLAGVKEKTGEKHSFIIHSLLLR
NSGHFSITRTSQELPGFSDTLKRFWFQLLGDLVQLLFQLKRSPLPVEDYASRKEMSTEQV
ERWLAPILGYEP
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggctccgactaacgtccgctaccagctgcctgctgccgccggctgcggctccgcggtg
gaggctgagctgcgaagcttgctgcagcaaaggatcatggtcctagatggcggaatggga
acgatgatccagctggagaagctggaggaggaagatttcaggggagaagagttcaaagac
catcctctacctctgaagggaaacaacgacctcctcagcatcacacagcctcacatcatc
tacaaaatacaccaggagtatctgcaggccggcgccgacatcatcgagaccaacaccttc
agcagcacctgcgtagcccaggcggattacggcctggagcgcctggcctaccgtctgaac
agggcgtctgcagagctggccaggagggccgccgatgatgtcaccaagcagtcagggtgg
aaacgctatgtggccggggccctgggccccaccaataagaccctctctgtgtcgccttca
gtagagaaacccgattacaggaacataacgttcgatgagctggtggaggcctacaccgag
caggcccgcggtctgctggacggaggagcagacatccttctggttgaaaccgtctttgac
acggccaacgccaaggccgctctgttcgccatcgacctgctgtttgaaaagacccaccga
aggacgcccatattggtgtcggggaccattgtggaccggagcgggcggacgctgtccggt
cagacgggagaggccttcgtagtgagtgtttcccatgctaaacctctgtgtattggcctg
aactgtgctctaggggccacagaaatgaggccttttattgaggcaattggaaaaagcacc
acagctttcgtcatctgttatcccaatgcaggtcttcccaacacatttggaggttatgat
gaaacgcctcaggtcaccgcctccagtttaaaggagtttgctgcggatggattggtgaac
attgtcggaggttgctgtgggaccacgcctgcacatatcagagccatatcagaggcagtg
aaagcgtgcaagccaagagttcctcctgtggatgcctttaaagaccacctgcttctctca
ggattggaaccctttcgaattggaccgtacaccaactttgtgaacatcggcgagcgttgc
aatgtggcggggtcacggcgtttcgccaagctgatcatggccggccagtacgaggaagca
ctgagcattgccaaggcccaggtggagatgggggcccaggttctggatataaacatggat
gagggcatgctggatgggcccgcagccatggctcggttctgtaactttatcgcatcggag
ccagatgttgcacgggtacctctgtgcatcgactcctccaacttctctgtgattgaagct
gggctgaagtgctgccaggggaagtgcatcgtcaacagcatcagcctgaaggaaggagag
caggacttcctgctcagagcggccgctgtgaagcgctacggcgctgcggtggtggtcatg
gcctttgatgaggagggacaggccacagggacggagcgcaaggtagagatctgcactcgg
gcgtacgagctgctggtcagcaaggtcggatttgatcccaacgacatcatctttgacccc
aacatcctcaccatcggcacgggaatggaggaacataacgactacgccgtcagcttcatc
agggccaccaggctcatcaaggagacgctgcctggtgccagggtcagtggcggtttgtcc
aacctgtccttctccttcagagggatggaggccatcagagaagccatgcatggggcgttc
ctctatcacgccatcaaggatgggatggatatgggcatcgtgaacgccgggaaccttcct
gtttatgacgacatcgataaggagctgctgacgatgtgtgagaacctcatctggaacaaa
gaagccgacgctacagatagactcctggcctatgctcagaacatagtgaaaggagggaag
aaggtggtccagacggacgaatggagaaacgcgtgcgtagaagagcggttggaatacgct
ctcatcaagggaatagacaaacatgtggtggatgacgttgaggaatgccgggcgcaggtg
gatcgctacaagcggccccttcacatcatcgagggtcccctgatgaacggcatgaaagtg
gtgggggatttgtttggagctgggaagatgttcctgccacaggttatcaagtcggctcgt
gttatgaagaaggccgtcggttacctgatccccttcatggagaaggagagggaggagatg
atggcagcatcaggatcagccgaggagacgatgttcagccacattcagagaatttcacca
gcttgttcggtctgttgcagggtgatcgacttgggtgtgatggtttcctgtgatcggatt
ctcagagaggctgtcactcagaaagctgatatcatcggcctgtcgggcctcatcactccc
tctctggatgaaatgatttatgtggccaaagaaatggagcgacttgcaatgacaacaccc
ctgctgattggaggagccaccacatcaaagacacacacagcagtgaagattgcgccgtgt
tacagctgtcctgttgtccatgtcctcgatgcctccaggagtgtggttgtgtgctcccag
ctgctggaggagggagccagggaggagtattttgaggacgtgaaggaggagtatgaggac
atcaggcaggagcattatgactccctgaaggagcgtcgctacctttctctctctgaggcc
agacagaaggctttacgtgccgactgggccgctgcgcccagaccagtgcgccctcagttc
ctgggcactcgtgtgtttgagtgttacgatctgaacggtctgctggacttcatcgactgg
aagcctttctttgacgtgtggcagctcagagggaaataccccaacagaggataccccaag
attttcaacgacaagactgttggtgctgaagctcgcagagtctttgatgacgcccagtcg
ttgctccatcgcatgatcgacagccgcagcctggaggggcggggcctggtgggtttctgg
cgcgcacagagcgtcggcgatgacatcaatgtgtacgaagacgacgacgacgtggttcgg
agtgatgtaaaacccatcgccactcttcacggcttacggcagcaggcggagaaggacggc
tccagctcagagcccttcctgtgtgtttctgactttgtggcgcccgtggagagcggcgtg
gccgactacattgggatgtttgctgtaggcgtgtttggagccgaggagctgagtcagcag
ttccagacccagggagacgattacagcagcatcatggtcaaagctctggctgatcgatta
gctgaggccttcgctgaggagctgcacgctcgtgtgcggaaggagctgtggggctacagc
tccgacgaggccctgcaggcctcagaccttcacagagttcgctaccaaggcatccgaccg
gcagccggctaccccagccagccggaccacaccgagaagctcgtcatgtggagcctggcc
ggcgtcaaggagaagacaggtgagaaacactcattcattattcattcacttctacttaga
aactctggtcatttctcaatcacaagaacatcacaggagcttcctggattctcagacacc
ctgaagcgtttttggtttcagctcctcggagatctcgtccagctgctctttcagctgaaa
cgctctcctcttcctgtggaggactacgccagcaggaaggagatgagcacggagcaggtg
gagcgatggttggctcccatcctgggctacgagccgtag
DBGET
integrated database retrieval system
