Cyprinodon variegatus (sheepshead minnow): 107087899
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Entry
107087899 CDS
T06110
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00600
Sphingolipid metabolism
cvg01100
Metabolic pathways
cvg04142
Lysosome
cvg04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107087899 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107087899 (smpd1)
09143 Cell growth and death
04217 Necroptosis
107087899 (smpd1)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
107087899 (smpd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
ASMase_C
COE1_HLH
Motif
Other DBs
NCBI-GeneID:
107087899
NCBI-ProteinID:
XP_015235217
Ensembl:
ENSCVAG00000020667
UniProt:
A0A3Q2GQ06
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MSPSALRPFLGLITFTLLLVFGSCHPAQHPAQTRTPFRQQLDSFRFPWRNITCPVCKALF
AILDVALLSSVNEERVAHAVCEACIRLHLADEQVCRNITELFRDDFIRALQQSLLWPSEA
CAVLVGPSCGTFDIYAPWNITLPKVPKPPVTPPSPPKPGSPQSRVLFLTDIHWDKEYQAG
SAADCKEPLCCREDSGVPKWKRRKAGYWGTYSKCDLPLRTVENFLKNAAKAGPWDWAYWT
GDIPAHNVWSQTRDQQLTELTVISRLIHKYLGTNVTVYPAVGNHESTPVNSFPPPFIHGN
RSSSWLYDKMAEEWAVWLPEQALKTLRYGGFYSVEIQPGLRLVSLNMNFCARENFWLMVN
SSDPANQLQWLVQVLQDSENRGEKVHIIGHIPPGLCLGSWSWNYYHIVNRYESTITGQFF
GHTHLDEFQMFYDEETMSRPLGVAFIAPSVTTFVNLNPGYRVYYVDGNYKNSSRLVLDHE
TYILNLTEANHNPKSPGDPEQDPKWSLLYRATEAYGLSSLFPSDYEALLRVFINDDRTFQ
RFWYLRHKGHVSESCREACKTTMICFLRSGRSDELDQCDQRNGFGGKLARAARKTLC
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctcagctctgcgccccttcctggggctgatcaccttcactttgctcctggtg
tttggatcctgtcatccggcgcagcatccagctcagaccaggactccgttcagacagcag
ctggacagcttcaggttcccctggagaaacatcacctgtccggtttgcaaagcgctcttc
gccattctggatgtcgcccttctgagcagtgtgaacgaagagcgggtggcacacgccgtc
tgcgaggcatgcatccgtctgcatctggctgatgagcaggtgtgtcggaacataacggag
ctcttcagggacgacttcatcagggcgctgcagcagtctttgctgtggcccagtgaagca
tgtgcggtgttggtgggaccctcttgtggcacatttgacatttatgcaccctggaacatc
actttaccaaaggttccaaagcctcctgttacaccgccctcacctcccaaacctggctct
ccacagagcagggtgctgtttctcacagatatccactgggacaaggaataccaagccggc
agtgctgcagactgcaaggagcctctttgctgtcgcgaagactctggcgttccaaaatgg
aagcggagaaaggccgggtactgggggacctacagcaagtgtgacctgcctttacgaacg
gtggaaaacttccttaaaaacgctgccaaagccggaccttgggactgggcctattggact
ggagacatcccagcacacaacgtttggtctcagaccagagaccagcagttgacagagctg
acggtcatctccaggctcatccacaagtatctgggaaccaatgtcacggtttatcctgcg
gtaggaaatcatgagagcacacctgtcaacagcttcccaccacctttcattcatggcaac
agatcctcctcctggctctatgataaaatggctgaggaatgggcagtctggttgccagag
caggctttgaagactttaaggtatggagggttctactcagtggagatccagcctgggctg
aggttggtctccctcaacatgaacttttgcgcacgagaaaacttctggctgatggtgaac
tcgagtgatcctgctaatcagctgcagtggctagttcaagttcttcaggacagcgagaac
aggggcgagaaggtacacatcattggccatatcccacctggcctgtgtcttggcagctgg
agctggaactactatcacattgtcaacagatacgaaagtacaattacagggcagttcttt
gggcatacccatctggatgagttccaaatgttttatgatgaagaaaccatgagccggccc
ttaggagtggctttcattgcccccagtgtcaccacttttgttaaccttaatccagggtac
cgcgtctactatgttgatggaaattacaaaaacagctctcgacttgtgcttgaccacgag
acctacatcctcaacctcaccgaggccaatcacaatcccaagtcaccaggcgatccagag
caggaccccaaatggagcctcctgtaccgagccactgaagcttacggtctttccagtctg
ttcccgtcggattatgaagcactgctccgagtctttatcaatgatgaccgcaccttccag
aggttctggtacctcagacataaaggacatgtgtcggagtcctgcagggaggcgtgcaaa
actacaatgatctgttttctgcgaagcgggcgctctgatgagttggaccagtgtgaccaa
cgcaatggctttggagggaaattggctcgggctgcaagaaaaactctctgctga
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integrated database retrieval system
