Cyprinodon variegatus (sheepshead minnow): 107087930
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Entry
107087930 CDS
T06110
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1-like
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04530
Tight junction
cvg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107087930
09142 Cell motility
04810 Regulation of actin cytoskeleton
107087930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107087930
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
107087930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
PH_9
PDZ
RBD
SOS1_NGEF_PH
PDZ_6
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107087930
NCBI-ProteinID:
XP_015235271
Ensembl:
ENSCVAG00000019429
UniProt:
A0A3Q2DCB5
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MGNVESQNGESGVYGNGAVHLSRKHTSRSLRLTNKKTVTRRVRHSSTVKQEHRNSETSTR
SSSTPSIPQSLAESGLELFNGTDELGELGINPHWTQRVSMTIRTDSYQHEDEPLATPTPE
TSEADTIAQDGEEDSIGEGDALGDERCLQRMTEGSREGGAFKKKRSKSADMWRDYSLECS
MSDLSQENLTSTEDIIDGGEEEEEEHFPCPRGSTERASSLDHLCSQQRAGLRGQRNRYAK
NHREANCNEDAEGDDALMSPNEEDSSGYVAFTLPCRRSHCLSEGLSALGIPSAPCPAFQG
RRAHTTQDISGVLGEGSEYGDSGIDGVATETDADGELISRRCKAMSASFSLYSATESSVC
NGSDSGSSSAGGGEGRGSEGCRGGGVYENFRKELDSQVWTNQGTDCPEEACSAVSDEQSS
GTLSSAFPPDAGIGCTQGTVRKAGTLTVKNFLVHKKNKKVELATKRKWKQYWVSLKGCTL
FLYESDGRSVIDHNSVSKHALWVENSIVQAVPEHPKKDYVFCLSNSMGDAFLFQTSGQTE
LENWITAIHSACAAALARQHHREDTVRLLWTEIRKLEQKIDMDEKMKKMGDMQLSNVTDP
KKRKTILEQIFLWEQNLERFHIDLFRCRCYLASLQGGEPPNPKRLLGFASRPTKMAMGRL
GIFSVSSFHALVSARTEGSIRKRNQPVQRTFSKRRSRFSSLWGLDTASRRKTKGHPSVQQ
VFNNGMDHVRKPLERMFEDPANQKSNKTGDSMTSVRQQSVDSDIWISDYLKPSWVCLPNN
KPVLAIVQPGEMTLDVLSSVCKTHQIEPSGHYLRVKIWVDNQMLYYVPRSEEEISDLVYK
EIEICPRVTKVIRFDKAESSTIGYGFTVAVTDEDAVQRLYISEVKPGGLASAKGLKAGDE
IQYLNGKPASALQLDDLRAAFGDHMLTLGVSTLPQLDPKVLCSCPPHRSEGEQDPTTDIF
SQSQENILDEVSGLTVDSLDESLDEGPLLTPQSPRDHHEDRTLMAAGQKSTEQVTNFCRN
LHDMNTQECPMSSSSSSSSSSLSPSPVSALAPAAGTAAQRQLSHADKLRKVIAEVVETEK
TYVKDLLYLIERYLKPLQKESFLSQDELDILFGNLEEMAEFQMEFLRTLEDGIRLVPDLD
KLERVDQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPEFKAFLAERN
PRQQHSSTLESYLIKPIQRVLKYPLLLRELHSLTDKESEEHYHLDVAMKAMNTVASHINE
MQKLHEEYGAVFDQLINEQTADNKEVLDLSMGDLLLHSTVVWMNAPTHISKSKKDPELAA
FVFKTAVVFVYKNCSKHRKKIGGSHRTSVAEDRDHSRFRHMIATNSLQVRAPASSEATAV
CEIVHTRSESEGRPETTFQLCCSSPESKKEFLKVVQSILREKQRRQLLKTKSLPLNQKYV
PFGGKRLSALKGARPLMNRAASAPSRTLTRRSLTKNLITIDADLVLHGNNNSSPSNQHEP
CPSHKPQAEDTDRWVEEQFNLGRYEDRFEGIDSRQMKETDILSDDDEYCKSLRSPSSEAD
SLEAGVEGLNLKSNMESDSENELSLKAQQTKKKEDSDSFASCGLSVSRYSKIGPLKQQCA
AEKDSSKDQDDIWVRRDVFNKGCDSDIF
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtggagagtcagaatggggaaagtggtgtgtatggcaacggagcggtgcac
ctttcacgcaaacacacatcccgctcactccgccttaccaacaagaagacggtcactcgc
cgggtgaggcactcttccactgtcaaacaggaacacagaaactctgagacctccactcgc
tcctccagcacaccaagcatcccacagtccctagcagagagtggattggaactgttcaat
ggcacagatgaactgggagagttggggatcaaccctcattggacgcaacgtgtctctatg
actattaggacagactcctatcagcatgaggatgagcccttagctacgccaacccctgag
acctcagaggcagacacgattgctcaggatggagaagaggattcgataggtgaaggagat
gcacttggggatgaaagatgcctccagaggatgacagaaggctccagagaaggaggcgct
tttaaaaagaaacgttcaaagtcagcagacatgtggagggattacagcctggagtgctct
atgtctgacctgagccaggaaaacctcaccagcactgaggatataatcgacggaggagag
gaagaggaggaggagcactttccatgtccgagaggctccactgaaagagcttcctccctg
gaccatttgtgcagccaacagcgtgcaggcctccgaggtcagaggaatcgctacgctaaa
aaccacagagaagccaactgtaacgaagatgcagaaggagacgatgctttaatgtctcca
aatgaggaggacagcagtggctatgtagcattcaccctcccctgtcgacgatctcactgt
ctttctgaggggctgtcggctctgggcatcccttctgcaccctgccctgccttccaggga
cggcgtgcacacactactcaggacatctcgggcgtcttgggggaaggaagcgagtatggc
gacagtggcattgatggcgttgctacagagacggacgcagacggcgagcttatctcgcgg
cggtgtaaagccatgtcggcctccttctcactctactcagccacagagagcagcgtctgt
aatgggagtgacagcgggagcagcagcgcgggtggaggagaaggaagaggctctgaggga
tgcagaggaggaggagtgtatgagaatttccggaaggagttagacagccaagtctggact
aatcagggcacagattgccctgaggaggcctgctctgctgtaagtgatgagcagagcagc
ggcacgctcagcagcgcctttccacctgacgctgggattggctgcacacaaggcacagtc
aggaaagctggaaccttaactgtgaagaacttcctggttcataagaaaaacaagaaggtg
gaacttgcgacaaagcgcaaatggaaacagtactgggtgtctttaaaaggctgcaccctc
ttcctgtatgaatctgatggtcgctctgtaattgaccataacagcgtttccaaacatgcc
ttgtgggtggagaacagcatcgtacaggccgtgcctgaacaccccaagaaagactatgtc
ttctgtctcagcaactcgatgggagacgcatttctattccagacgtcgggccaaaccgag
ctggagaactggatcacggcaattcactctgcgtgtgctgcggctctcgctcggcagcac
cacagggaggacaccgttaggttgctctggactgagatccgcaaactggagcagaagatt
gacatggacgagaaaatgaagaagatgggagatatgcagctatccaatgtcactgatcca
aagaagaggaagaccattctggagcagattttcttgtgggagcagaacctggagcggttc
cacatagatcttttccgctgtcgctgctacctggccagtctgcaaggcggcgaacctcca
aatcccaaacgcctcctaggctttgcttcacgcccaaccaaaatggccatgggtcgcctc
ggcatcttctctgtgtcttccttccatgcactggtgtctgcccgaactgagggcagcatc
aggaagcgaaaccagcctgtgcagcgcaccttcagtaaacgacgtagccgtttctcctcc
ctttggggtctagatactgcctccagaaggaagaccaagggacatccttcagttcagcag
gtgtttaataatgggatggatcatgtaaggaaacccttggagcgcatgtttgaagaccct
gccaaccagaaatctaataaaacaggagactccatgacatctgttcgtcagcaaagcgtt
gacagtgatatttggatttctgactacctaaagccatcctgggtgtgtctgccaaacaat
aagccagtcctggcgatcgtgcagcctggagagatgacactggatgtcctgagcagcgtc
tgtaagacccatcagattgagccttctggtcattatctacgtgtgaagatctgggtcgac
aaccagatgctttattatgttcccagatctgaagaggagatctctgatttggtctacaaa
gagattgagatttgccccagagttaccaaggtgatccgttttgacaaagcagagtccagc
accatcggctacggtttcacggtggcagttactgatgaggatgctgtacagcggctttat
atctccgaagtcaaaccagggggactggcttcagccaaaggtttgaaagcaggagatgag
attcaatacctcaatggtaaacctgcctctgcccttcagctggatgatttgagggcagcg
tttggagaccacatgcttactctgggtgtcagcaccctgccccagttggaccctaaagtg
ctgtgctcctgtccgcctcatcgctccgaaggagaacaagacccaaccacagatattttt
tctcagagtcaagagaacatcctggatgaggtgtcaggtttgacagtggatagccttgat
gagagtttggatgagggacctctattaaccccgcagagccccagagatcatcatgaagac
agaacattaatggccgctggacagaagagcacagagcaggtcactaatttctgccgcaat
cttcatgacatgaatacccaggagtgcccaatgtcatcctcctcctcctcgtcttcatcg
tccctgtcaccgagcccagtgtcagctttggccccagctgccggcactgcagcccagcgg
caactctctcacgctgacaaactgcgcaaagtgatcgctgaagtggtggagacggagaag
acgtatgtcaaagacctgctctatcttatagagcgctacttgaaacctttacagaaagag
agcttcctatcacaggatgagctggatattttatttggcaacctcgaagagatggcggaa
ttccagatggagttcctgcgaacactagaggatggaatcaggctggttccagatctggac
aaactggagagggtggaccagttcaagaaggtgctgttctctttgggtgggtcattcctg
tactacgctgatcgattcaagatctacagtgcgttttgtgccagccacactaaagttccc
aaggtcttggcaaaagccaaaactgacccagagttcaaagctttcctggctgagagaaac
cccagacagcagcattcatccactctggagtcttacctaatcaaacccatccagagagtg
ctgaaatacccgcttctgctccgagaactccactctctcaccgacaaagagagtgaagaa
cactaccacctggatgttgcaatgaaagccatgaacacagtggcgagtcacatcaatgag
atgcaaaagcttcacgaggagtatggagcagtttttgatcagctcattaatgagcagaca
gcagataacaaagaggtgcttgatctctcaatgggtgatctgctgctgcattcaacagtg
gtttggatgaatgctccaacacatatcagcaagagcaaaaaggacccagaattagctgct
tttgtgtttaaaacagcagttgtgtttgtctacaaaaactgctccaaacacaggaaaaaa
attggaggatcccatcgtacgtctgtggctgaggacagggatcattcccgcttcagacac
atgattgcaacaaactcactgcaagttagagctcctgcaagttctgaagccacagcagtt
tgtgaaatagttcacacaaggtctgaatctgaagggagacctgaaacaacctttcagttg
tgctgcagttctccagagagtaaaaaggaattcttaaaagtggtccagtctattcttagg
gagaagcaaagaagacagcttctgaagacaaagtctctgccactgaaccagaagtacgtt
ccatttggtggcaaacgcctgagcgccctcaaaggagcgcggcctctcatgaacagagca
gcctctgctccatcacgaactctaacccgcagaagcctgacgaagaacctcatcactatc
gatgctgacctggttttacatggcaataataacagttcgccgtccaatcagcatgaacct
tgtccatctcataaacctcaggcagaggacacggatcgatgggtggaagagcagttcaat
ttggggcgctatgaggaccgttttgaaggcattgatagcagacagatgaaggagactgac
atcttgagcgatgacgatgagtactgtaaatctcttcgatccccgtcgtcagaagcagac
tccctagaggcaggagtggaaggactcaacttgaaaagcaatatggagtctgacagtgag
aacgaactgagtttaaaagcgcaacaaactaagaaaaaggaagattcagactctttcgca
tcctgcggtctctctgtctcccgttattcaaagatcggacctttgaagcagcagtgtgct
gcagagaaggactcaagcaaggaccaagatgatatctgggtgaggcgggatgtctttaat
aaagggtgtgacagcgatatattttga
DBGET
integrated database retrieval system
