Cyprinodon variegatus (sheepshead minnow): 107090037
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Entry
107090037 CDS
T06110
Name
(RefSeq) sharpin
KO
K20894
shank-associated RH domain-interacting protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04217
Necroptosis
cvg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
107090037
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107090037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107090037
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
107090037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
CATSPERB_Ig-like
ubiquitin
Motif
Other DBs
NCBI-GeneID:
107090037
NCBI-ProteinID:
XP_015238675
Ensembl:
ENSCVAG00000006586
UniProt:
A0A3Q2DU31
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MALSSGSWALPAPVPASSQQPACSGPAPAACCSTVLMSVRVSVSHSGIRPLCLPGAGSDS
LRLQLSMDPNIAGEFRLALRDTSGNRSVFIAEFDLRSVQYEVKSSRCHEMRLAAAPLDCI
RFNFRCDREAEAWSTVVLSSLREAHRVANINACESDGKHISEAAPDQRTSTSLLLIEELC
SELSKAIEAGDIQAASQHASALARQKAVLTIQPSPKNYTDGEISLSVVVEDASSSCCVTV
IVFPYMSVATLKQQVFLEYGFHPRVQRWVIGQCLCADPRSLASYGVQKDGDTAYLYLISA
RQARVTRQLFQQDLDNSLLASPLPLGSSLTSQVWRGYSTLPSKLPHNNQETGGGNNKASD
IKDVLDFEKLHLNDRPNKANKTQQTDWACPSCTFINKPSRPGCEICATARPDLQTCIQQE
KGRREDRREPGVSSS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcactcagctcgggtagctgggctctccctgctccggttcctgcctcatcccagcag
cctgcttgcagcggccccgctccggcagcatgctgcagcactgtcctgatgtctgtccgc
gtttcggtgtcccactccgggatcagaccgctgtgcctacctggagcgggaagcgactct
ctgcggctgcagctcagcatggaccccaacatagccggagagttccggctggcactgcga
gataccagcggaaatcgcagtgtgttcattgcagagtttgacttgcgctcggttcagtat
gaggtcaaatcctcccgctgccatgagatgcgacttgctgctgcgcccctcgactgcatc
cgtttcaacttccgctgcgaccgcgaggctgaagcttggtccactgtggtgctgtcatcg
ctgagagaggcgcacagagtggcaaatataaacgcctgtgaatctgatggcaaacacata
tctgaagcagccccagatcagaggacctccacctctctgctgctcattgaggagctgtgt
tcggagctctccaaggcgatcgaggcaggggacattcaggccgcctcccagcacgcatcc
gctctggctcggcagaaagcggtgctgacgatacagccgtccccgaaaaactacaccgat
ggagaaataagtttatctgtggtggtggaggatgcctcttcttcttgttgtgtcacagtg
atcgtttttccatacatgtccgtggccacgcttaaacaacaggtcttcctggagtacggc
ttccatccgcgcgtgcagcgctgggtgatcggtcagtgcctgtgtgccgatcccaggtca
ctggcttcatacggagttcagaaagatggcgacaccgcgtacctttacctgatctctgct
agacaagctcgggttacacggcagctgttccagcaggacctggacaactccctgctagct
tcaccgctgccccttggaagcagcctcacctcccaggtctggaggggttacagcactctg
ccatcaaagcttccccacaacaaccaggaaacaggcggagggaataataaagcaagtgac
atcaaagatgtccttgattttgagaagctgcacctgaacgaccgccccaacaaagccaac
aagacgcagcagacagactgggcttgtccatcatgcactttcatcaacaagccgtctcgc
ccgggctgcgagatctgcgccactgccaggcccgacctgcagacctgcatccagcaggag
aaaggcaggagagaggatcgcagggagcctggtgtaagcagcagctga
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