Cyprinodon variegatus (sheepshead minnow): 107092049
Help
Entry
107092049 CDS
T06110
Symbol
nr1i2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2 isoform X1
KO
K08540
pregnane X receptor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107092049 (nr1i2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvg03310
]
107092049 (nr1i2)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107092049 (nr1i2)
Nuclear receptors [BR:
cvg03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
107092049 (nr1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107092049
NCBI-ProteinID:
XP_015241812
Ensembl:
ENSCVAG00000014052
UniProt:
A0A3Q2GJP9
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MSLKAAGIQAVYEALTVPHEEEEEEEDNGKTTDDEEPRACGVCGDRAKGYHFNALTCEGC
KGFFRRAIKRSTQLRCPFLNKCTITKNNRRSCQACRFRKCQAIGMRKDMVMSEEEVLERR
IRIKKKKIANSTTELSFQQEKMVEELLCSLRNTFDSTFSRFTGFRPRDRDILAENQETTC
PTKTCSTADKPAAPPTTSPYHCSLSPVPSSPSSSSSTYYFQSSFSEKIDGHLGDKSSFVY
TNLPHLSDLTTYMIQDIIRFSKSLQDFRSLSIEDQISLLKGATFEMMQIRFNMVFNTSTN
NWECGHITYCIHDAVRGGFQPLLLEPIFKFHHNLRKLDLGEEEYALIQALSLFSPDRQGV
QQHATIDRVRENLALTLKTWIDCKKTGPKKLLLYPKLIACLTELRTMTEEYSKQVLQIQE
VQPDTISPLMMEVVSKNPCKHN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaaagctgctgggatccaagctgtctatgaagcccttaccgtgccacatgag
gaagaggaggaggaggaggataatgggaaaacgactgatgatgaggagcccagagcgtgc
ggtgtttgtggtgatcgtgcaaagggttaccactttaacgctctgacatgtgagggctgc
aaaggcttcttcagacgtgccataaagaggtcaacacagcttcgatgtccattcctgaat
aaatgcaccataaccaaaaacaaccggcgctcgtgtcaggcctgccgcttcagaaaatgc
caagctattggcatgcggaaagacatggtcatgtcagaggaagaggtcttggagcgacga
atcagaataaagaagaaaaagattgcaaactcaaccacagagctttcgttccaacaagaa
aagatggttgaggagctgctttgtagcctccgcaacacatttgactcaacattctcacgt
ttcactggcttcaggcctagggatagagacattttggcagagaaccaggagaccacctgt
cctacaaagacctgctcaacagctgataaacctgcagctccgcctacaacatccccctac
cactgctccttatccccagtcccatcctccccgtcttcctcctcttccacctattatttc
cagtccagtttctctgagaaaattgacggccaccttggagacaaaagcagctttgtttat
actaatctcccacatctgtctgacctcaccacttacatgattcaggacatcatccgcttc
tctaaaagtcttcaggactttcggtctctaagcatcgaggaccaaatatctctactaaaa
ggagccacatttgaaatgatgcagatccgcttcaacatggttttcaacacctctacaaac
aactgggaatgtggccatattacatactgcatacacgacgctgtgagagggggtttccag
ccgctccttctggaacccatcttcaagtttcaccacaatcttcgcaagctggacttaggg
gaggaggagtacgccctcatccaggccttgtctctgttttctccagatcgtcaaggagtg
cagcaacatgccaccattgacagagttcgtgaaaacttggcactgacgctgaaaacctgg
attgattgtaagaaaacaggaccaaaaaagctcctgctgtaccccaaattgatagcctgc
ctcacggagttgagaacgatgactgaagagtacagtaagcaggtcttgcagatccaggag
gtgcagcctgacaccatctctcccctcatgatggaggtggtcagtaaaaacccctgcaag
cacaactga
DBGET
integrated database retrieval system
