KEGG   Cyprinodon variegatus (sheepshead minnow): 107092765
Entry
107092765         CDS       T06110                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107092765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cvg03000]
    107092765
   04121 Ubiquitin system [BR:cvg04121]
    107092765
   03036 Chromosome and associated proteins [BR:cvg03036]
    107092765
Enzymes [BR:cvg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     107092765
Transcription factors [BR:cvg03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    107092765
Ubiquitin system [BR:cvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107092765
Chromosome and associated proteins [BR:cvg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107092765
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107092765
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box PHD LRR_4 DTHCT
Other DBs
NCBI-GeneID: 107092765
NCBI-ProteinID: XP_015242897
Ensembl: ENSCVAG00000004636
UniProt: A0A3Q2DR57
LinkDB
Position
Unknown
AA seq 778 aa
MALSMSGDDEEYESESEQQKAVNRPKPKMGTTSAVKLPSNRSASGARRRRTRCRKCEACL
RTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCKEAGKEDTLEDEEEK
FNFMLMECSICNEIVHPNCLKVSDASGVVNDELPNCWECPKCNHAGKSGKVLKQKRGPGF
KYASNLPGSLLREQKPVKEEGDISSGTKRKPDRDETPRYRTEEALHRQPPLLSPSGLPRP
RPEDKLRKKRKLFDDDEEDDFNVRKKEKTEDSYFSKLLPQVKTEKEEEDDEDDDAGREHH
FRSSVDRKGRFGEAEEEADYRDSRNDSLNSSIKTPLGDSDHSHCSSPQAGPSSEGGSETQ
EKGPRPKARRKRRLPNRELSRELSKALNQEIQKTEDCLANENRQPLKVEPEMENEEPKKL
FRNGNDLGDQRSHLKTKEMNGNTWDLRHFYPSQITPLGFNRSTPTTRPVPPRSPPKCVQM
ERHVIRPPPISPPPDRLPLKDGKAHVLQREVWMKIFGYLSHKELCVCMRICKTWNRWCCD
KRLWTNIDLNRCTSVTPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRVLKLSG
CSWAAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRCKLRNVEDL
RLAGLDITDASLRLISRQMPLLSKLDLSYCNHINDQSVNLLTAAGTTTRDSLTEINLSVC
NRVTDHSLNYFKRCGSICQIDLRFCKQVTKTACEHFIAEMSVSVPFKLKEDKLLQKIS
NT seq 2337 nt   +upstreamnt  +downstreamnt
atggccttgtcaatgagcggagacgatgaagaatatgagtcagaatccgagcagcagaaa
gcagtcaaccggccaaagccaaagatgggaacgacgtcagccgtcaagctgccatccaac
cgcagcgcatcgggagccaggcgcaggagaacgcgctgccggaaatgcgaagcgtgtctc
cgcacagaatgtggagagtgtcacttctgtaaggatatgaagaagtttggagggccgggg
cgcatgaagcagtcctgcatcatgaggcagtgcatcgcgcctgtcctgccccacacagcg
gtgtgtgtggtgtgtaaagaggcgggaaaagaggatacgcttgaggacgaagaggaaaaa
ttcaacttcatgctgatggagtgctccatctgcaacgagattgtccatcccaactgcctg
aaggtgagtgatgcctcaggtgtggtgaacgatgaactgcctaactgctgggaatgcccc
aaatgcaaccacgctggcaaaagcggaaaagtattgaagcaaaaaaggggccccgggttc
aagtacgcctccaaccttcccggctctttgctgagggaacagaagcctgtgaaggaggag
ggggacatttcttctgggacgaagaggaagccggacagggacgagacacccaggtacaga
accgaggaggctctccatcgacagccgccgctgctctcccccagcggcctgccgaggccc
agacccgaggacaagctgaggaagaagaggaagctttttgatgacgacgaagaagatgac
ttcaatgtgaggaagaaggagaagacggaggactcgtatttctctaagcttcttccccaa
gtcaagacagaaaaagaggaggaagacgatgaagatgatgacgcaggaagggagcatcac
ttccggagcagtgtagacaggaaaggccgctttggagaggcggaagaggaagcggattac
agggactcgaggaacgactctctgaattcttccattaaaacaccacttggagacagcgac
cactcccactgcagctctccgcaggccggccccagcagcgagggcgggagcgagacgcaa
gaaaaagggccccgtccgaaggctcggcgcaaacggcgcctacccaacagggaactgagc
cgagaactgagcaaagcgttgaaccaggaaatccagaagaccgaggactgcctggccaat
gagaaccggcaaccactaaaggtagaaccagagatggagaacgaggaaccaaagaagctg
ttccgcaacggtaacgatctcggcgaccagcggtctcatctgaagaccaaagagatgaac
gggaacacctgggatctgcgccacttttacccgagtcagatcacccctctgggcttcaac
cggagcaccccgacgacccggccagtgcccccccgctccccgcccaagtgcgtccaaatg
gaacggcatgtaatccggccgccccccatcagcccacctcctgacagactgccgctgaaa
gatgggaaagcacatgtcctgcagcgtgaggtgtggatgaagatatttggctatctctct
cacaaggagctctgcgtctgcatgagaatttgcaagacatggaaccgatggtgttgtgac
aagagactttggacaaacatcgatctgaaccgctgcacctcagtcacgccgcttatgctg
agtgggattatccgcaggcagccagtgtccttagacctcagctggaccaacatttccaaa
aaacagttgagctggcttatcaatagattaccaggtctgcgggtgttaaagctgtcgggt
tgttcctgggccgccgtctctgctctctgcacctccagctgcccccttctgcgcactctg
gacgtccagtgggtggagggacttaaagacgcacagatgagggacctcctttcacctccc
actgacaacagaccaggtcagctggataatcgctgcaagctgcggaacgtggaggacctg
cggctggcggggctcgacatcacggacgcatccctgcgtctcatcagcagacagatgccc
ctgctgtccaagctagacctgagctactgcaaccacatcaacgaccagtctgtgaatctg
ctcaccgccgcaggaaccaccaccagggactccctcacagaaattaacctatcagtttgt
aacagagtcacggatcattcgttgaactatttcaagcgctgcggcagcatctgtcagatc
gacctccgcttctgtaagcaggtgacgaagacggcctgcgagcacttcatcgctgagatg
tccgtgagcgtcccgttcaaactgaaagaggacaagctgctgcagaagataagctag

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