KEGG   Cyprinodon variegatus (sheepshead minnow): 107093096
Entry
107093096         CDS       T06110                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03420  Nucleotide excision repair
cvg04110  Cell cycle
cvg04114  Oocyte meiosis
cvg04120  Ubiquitin mediated proteolysis
cvg04141  Protein processing in endoplasmic reticulum
cvg04310  Wnt signaling pathway
cvg04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107093096 (rbx1)
   04120 Ubiquitin mediated proteolysis
    107093096 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107093096 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    107093096 (rbx1)
   04350 TGF-beta signaling pathway
    107093096 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    107093096 (rbx1)
   04114 Oocyte meiosis
    107093096 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvg04121]
    107093096 (rbx1)
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107093096 (rbx1)
Enzymes [BR:cvg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     107093096 (rbx1)
Ubiquitin system [BR:cvg04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   107093096 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     107093096 (rbx1)
   Cul2 complex
     107093096 (rbx1)
   Cul3 complex
     107093096 (rbx1)
   Cul4 complex
     107093096 (rbx1)
   Cul7 complex
     107093096 (rbx1)
   Cul8 complex
     107093096 (rbx1)
   Cul9 complex
     107093096 (rbx1)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107093096 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107093096 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 107093096
NCBI-ProteinID: XP_015243409
Ensembl: ENSCVAG00000010410
UniProt: A0A3Q2GGS9
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgttgacacaccgagcggtgctaacagtggagcgagcaagaag
cgatttgaagtcaaaaagtggaatgctgttgcgctgtgggcctgggacatagtggtggat
aactgtgccatctgtaggaaccacatcatggacctctgtatagagtgccaggccaaccag
gcttctgccacatcggaagagtgcaccgtggcctggggcgtctgcaatcacgcctttcat
tttcactgtatttcccgttggctgaaaaccagacaggtgtgtcctctggacaacagagag
tgggagtttcagaaatacggacactag

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