Cyprinodon variegatus (sheepshead minnow): 107093217
Help
Entry
107093217 CDS
T06110
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04140
Autophagy - animal
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107093217 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107093217 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107093217 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107093217 (plekhm1)
Membrane trafficking [BR:
cvg04131
]
SNARE
SNARE associated proteins
Others
107093217 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
107093217 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
PH_11
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
107093217
NCBI-ProteinID:
XP_015243595
Ensembl:
ENSCVAG00000007486
UniProt:
A0A3Q2GE55
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MLATQMPEKQPEAKEAKQIKEKLAQSLKALHKRYVASDDVVTSEDGDANLLCSALEAIFI
HGIKSKYIRSEAGGWSRKGDRGVLPQPFFWSLLKTVTHRDVITELEKISYLGTDVGRCRA
WLRLALNHGLLECYLTSLFREDSKLRAHYQPNALLLNEEDREVLLSYLQGLASLTFSLSY
KSAVLKEWTTTPLALAGLCPLSQADTLNGFEHLASKPGRKESWDTLSQSSGSSDPMDAQR
ALSSGAEILQGEKTALYSSSLSLDTTGSSQLSSSLSSDSLLQGQDPRSPTAEHWSSGDLD
APIIVKNGSKRSQKDVLSDFRGKGQFSQDSMREDSFISSTSGEPLSENMTFSGSDSEIQD
HDMSSLNPAEQLQSSDPEPPTPSAQIPPCDEPPEVQAPNEICNSVSSDFCSETAPISSVT
ESNKPEEEEHVAVVHKSTEPIQEMKQTGGSEQNGSESQTHKGPQRSASIVSRKLSTDSLS
HSRSWISEDDIYKPHLEEVLDNEELSPTADLEASQPPPSVVHRRQIGLSNPFRGLLKLGH
LERRSAMGLWRDYYCELSPFEFRMYLNAEDRECCENCSLLRCEDIRITSSEGRFELTFPG
KRFYLRAANQDEAEDWVDRIIEAVNKCRPAPHDDEHWEVLKPSDENGADERTVLSPSSAP
SSPERRLSLSETAPPPQEFDWTQTTDLETDAIKEAVLYLSTDCEARTWAPLVFSLSLENL
KGFRVQEGRKVLWLNHPVAEIRDVVPDVSLGGPAFFKVLTVRETLRFRAENRDEARSWRD
LIRGALDSYLESGEDGTPDEQTPVWSTGPTGNLHRLVQHRLKENGPLLVHLYTVPSEKGL
DAQGFKCTGCPQQIGPSRGRAKLCEFTGRYFCDSCHKGDTTIIPSRMVHNWDLTHREVSK
KALSLLAHIEQEPLLNLDLLNPELVNHAESMAQAHNLRQRLRLLGEYLLTCRSGALKKLH
SRMGQRTYLLESSHQYSVLDLRQIAEGQYAAFLISLVQHASNHVLNCDLCSQRGFICQIC
HSDDILFPFQFDCTTRCNDCKAVFHLSCKSAKNACPRCQRMKKYLERDLQD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccacacagatgccagaaaagcaaccggaggcgaaagaagccaaacagatcaaa
gagaagttggcccagtctcttaaagcccttcataaacgatatgtggcatcagatgatgtg
gtcaccagtgaagacggggatgccaacctcctctgctctgccctggaggccattttcatc
catgggatcaagagcaagtatatccgctccgaagctggaggctggagtcggaagggagac
cgaggagtcctccctcagccttttttctggagcctcctcaagacagtcacccaccgtgac
gtgatcacagagctggagaagatcagctacctcggcacagatgtgggccgctgcagagca
tggctgcggttagctctgaaccacggccttctggagtgctacctcacatctctgtttcgg
gaggactcaaagctgcgagcccactatcaacccaatgccttgctgctgaatgaagaagac
agggaagttctgctcagctacctccagggtctggcctcgctcacattcagcttgtcgtac
aagtcggctgtccttaaggagtggaccaccacgcctctggctctggctggactctgccca
ctgtcccaggcggacaccctcaatggctttgagcatctcgcctccaagccgggacgtaag
gagtcctgggacactctatctcagtcatcgggttcatctgatccaatggatgcacagaga
gctctttcaagtggagcagagattttgcaaggagaaaagacagctctttactcatctagt
ttgagtctggacaccacagggtcctcccagctttcctccagtttgagttccgatagcctc
ctgcaaggacaggacccccgcagcccgaccgcagagcattggtcttcaggtgacctggac
gcacccataattgtcaaaaacggcagcaaaagaagccaaaaagatgtgctgtctgatttc
cggggaaagggacagttcagtcaggactccatgcgtgaagactcattcatctccagcaca
agtggcgaaccattgtcagagaacatgacattcagcggctcagatagcgagatccaggac
cacgatatgtcatccctaaatcctgcagaacagctccaaagttctgatccagagcctccc
acaccctctgcccagataccaccctgtgacgagccacctgaggtccaggcaccaaatgaa
atctgcaacagcgtatcgtccgatttctgctcagaaacagccccgatctcctctgttact
gaatccaacaaacctgaagaggaagaacatgtggctgttgttcataaaagcacagagcca
attcaggaaatgaagcaaacgggcggctcggagcagaacggctctgaatcacaaacgcac
aaaggaccacagcgctcagcgagcatagtgagcaggaaactctccacggattcactttca
cattcacgttcttggatttctgaggatgacatctacaagcctcaccttgaagaggtgctt
gataatgaggagctgtctcccacagctgatctggaggcctcccagcctcctcccagtgtg
gtccatcgcagacaaatagggctttccaatccctttcgaggcttgctaaaactcggccac
ttggaacggcgaagcgcgatgggattatggcgcgactactactgcgaactctcgcccttt
gagttccggatgtatctgaatgcagaggaccgggaatgttgtgaaaactgctcgcttctg
cggtgtgaagacatccgtatcacatcatcagagggccgcttcgagttgacttttccagga
aagcggttttacctccgagcagccaatcaggatgaagccgaggactgggtggatcgcata
attgaggccgtgaacaaatgtcgaccagcaccacacgatgatgagcattgggaagttctg
aagccatctgatgaaaatggagcagatgagcgcacagttttatctccatcctctgctccc
tcaagccccgagcgacgcttgtcgttaagcgagacggctcctcctccgcaggagtttgac
tggactcaaaccacagacttggaaacggatgctataaaagaagcggttttgtatctctct
acagattgtgaagccaggacatgggcccctctggttttctccctttccttagagaacctg
aaaggctttcgggttcaggagggaaggaaggtgttgtggctaaaccatcccgtcgctgaa
atcagggacgtggttccagatgtctctttgggaggaccagcttttttcaaagtcctgaca
gtgagagagacgctacgattcagggcagagaaccgagacgaagctcgctcatggagggat
ctaatccgtggcgctctggactcatacttggagagtggagaggacggaactcctgatgag
cagactccagtttggagcactgggccgactggtaatctgcacagactggtgcagcataga
ctgaaagaaaacgggccacttctggtccatctgtacacagtgccatcagaaaaggggctg
gatgctcagggctttaaatgcacaggctgtccgcagcagattggcccatccagaggcaga
gctaagctgtgtgagtttacaggccggtacttctgtgactcctgccacaagggggacacc
accatcatcccatcacgcatggttcacaactgggatctcactcatagagaggtgtcaaag
aaagctctgagtctgttggctcacatagagcaggagcctctgttgaacctggatctgctg
aatccggagctggtgaatcatgccgaatccatggctcaggcccacaacctgcgacagagg
ctgcgtctgctcggcgaatacctgctgacctgccgcagcggggccctcaagaaacttcac
agcagaatggggcagcgaacctacctgctggagtcgagtcatcaatacagtgtccttgat
ttaagacagatagcagagggccaatatgcagccttcctgatctccctggtgcagcacgcc
tctaatcacgtgttaaactgcgacctgtgctctcagcgaggattcatttgtcagatatgt
cactctgatgacatcctcttccccttccagtttgactgcaccaccaggtgcaatgattgt
aaagcagtatttcacctctcctgcaagtctgctaagaacgcatgtcctcgctgtcagcgc
atgaagaaatatctggagagagatctgcaggactga
DBGET
integrated database retrieval system
