KEGG   Cyprinodon variegatus (sheepshead minnow): 107093569
Entry
107093569         CDS       T06110                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107093569 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvg03041]
    107093569 (smndc1)
Spliceosome [BR:cvg03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107093569 (smndc1)
 Complex B
    107093569 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    107093569 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 SspH SH3_AtC3H22
Other DBs
NCBI-GeneID: 107093569
NCBI-ProteinID: XP_015244196
Ensembl: ENSCVAG00000020432
UniProt: A0A3Q2DFH1
LinkDB
Position
Unknown
AA seq 238 aa
MSEELAKQLSSYKAQLQQVEVALSTDPDNEDLQKLQKDLQEVIDLTKDLLSAQLIDGASS
TSGSASVPVKKSWKVGDRCMAVWSQDSQVYEAEIEEIDRENGTAAVTFIEYGNAEVIPLQ
NLKVVEEGKRSEEDGGGKSKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtctgaagaactggcgaaacagctgagcagctacaaagcacagctacagcaagtagaa
gttgctttatcaaccgatccagataatgaagacctccaaaaacttcagaaggacttgcag
gaagtcattgatttgaccaaagatctcctgagtgcgcagctcattgatggggcttccagc
accagtggttcagcgtctgtaccagtgaagaaaagctggaaagtgggtgacagatgtatg
gcagtatggagtcaggatagccaggtgtatgaagctgagattgaggagatagaccgagaa
aatggcactgctgctgttacgttcattgaatatgggaacgctgaagtgattcccctgcag
aacctcaaagtagtggaagaagggaagcgatctgaggaggacggagggggaaaatcaaag
tcaagaaaagagcaaatagcagagcagcgagagtataagaagaaaaaagcccagaaaaag
gtgcagaggatgaaggagttggagcaagagagggaggaccagaaatctaagtggcaacag
ttcaacaacaaagcttattcaaagaacaagaaaggacaggtgaagaggagcatatttgca
tccccagagagcgtaaatggaaaggtgggagtgggaacatgtggtattgcagacaaacct
atgacccagtataatgacacgtccaaatacaacgtcagacatctgatgcctcaatga

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