Cyprinodon variegatus (sheepshead minnow): 107094248
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Entry
107094248 CDS
T06110
Name
(RefSeq) exostosin-1c-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cvg01100
Metabolic pathways
Module
cvg_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
107094248
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvg01003
]
107094248
Enzymes [BR:
cvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
107094248
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
107094248
Glycosyltransferases [BR:
cvg01003
]
Glycan extension
O-Glycan
107094248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
DUF7501
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
107094248
NCBI-ProteinID:
XP_015245250
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MQARKKYVLLGLCACSWLVLFYCGGGVQLRVLRLITRHRAEVLHPWPNWTDRAFLPRYAH
LDELQTDPGTAESPRQRRQAWSTIYRDSRCRMETCFDFSRCRRRGREGFRVYIYPSEKGE
RVSESYRKILASISESRYYTSDPREACLFVLGIDTLDRDQLSGQFVPNMDERIRSYPSWN
DGRNHLIFNLYSGTWPNYTEDLGFNVGQAILAKASLNTEYFRPGFDVSIPLFSKDHPQKG
GGRGWLLRNTTPPRRKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIVSMTTCRHGKDWE
KHKDARCDHDNLEYERRRRRASPSGSPSVRLTAPEGPNPQAAPFAGPSMGSSSQLKAVGP
FRSSSSSFPPVLFFHVWRPLHQTWTSELTQRAGLLSDLQQRSPECGSKFYKWRKNISGRG
GGDGGALLRLLRGWLQVNDPPHLLLQQINLEGPGQQVIRVTSRISREEEEEEEEEEEEDL
FSSSCSRLDEEKLRSDPPPPVSAPLCVQAACIPVLLSNGWELPFSDVIQWNQAVVEGDER
LLLQVPSTVRAVPNQRVLELRQRTQMLWDAYFSSVDKIVLTTLEIIKDRIFSHISRNKYM
WNSLPGGLLVLPEFSTHLAHFPFYYLGLGISSGHEFTAVIHAVSPLVSQSQPIMKLLQVV
SKSKYCSQIIILWNCEKPPPSRSKWPPMPVPLIVTEGRRKTTSRFLPHVAIETEAVLSLD
EDTVLLTSEVNFAFLVWRSFPDRIVGYPPRSHFWDPLKQAWGYTSKWTNEYSMVLTGAAF
YHRYYNFLFSHFLPQSLRALVDRTANCEDILMNFLVSAATHLPPVKVAQRKQYKEVLPPQ
GVNSAPWAHPEHFAQRQDCVNAFASWFGYMPLVHSQLRLDPVLFKDQVSVFRKRYKDLER
A
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcgtaagaagtatgtcctgctgggcctttgtgcgtgctcctggcttgtcctc
ttctactgcggcggaggagtccaactacgtgtgctgcgcctgataacacgccaccgcgcg
gaagtcctgcacccttggcccaactggaccgaccgggccttcctgccccgctacgcccat
ctggacgaactccagaccgacccagggaccgccgagtcaccaagacagcgtcgacaagca
tggtccaccatctacagagacagccgctgccgcatggagacctgcttcgacttttctcgg
tgccggcgccggggacgcgaggggttcagggtctacatctacccatcagagaaaggtgag
cgcgtgtcggagagctacagaaagatcctggcctccatctctgagtcccgctactatacg
tcagaccctcgagaggcatgtctgtttgtgctcggcatagacacattggaccgggaccag
ctgtcaggacagtttgtccccaacatggacgaacgcatccgcagttacccttcatggaac
gatgggcggaaccacctgatcttcaacctgtattcgggcacctggcccaactacactgag
gacctgggcttcaacgtgggccaggccatcttagccaaagctagcctgaacacggaatac
ttccggcccggtttcgacgtgtccatcccgctcttctccaaggatcaccctcagaagggg
gggggacggggctggctcctgaggaataccacgccgccgcggagaaagtacctgctgatg
ttcaaggggaagcgatacctgaccggcatcggctccgacacccggaacgctcttcatcac
atccacaacgggaaggacattgtttccatgacgacctgccgccacgggaaggactgggag
aagcacaaggacgctcggtgtgaccatgacaacctggaatatgagagacgccggcggcgg
gcgtcgccctcgggttcgccttcggtgcgtctcacggcccccgagggcccgaacccgcag
gcggctccctttgcgggcccatctatgggatctagttctcagctgaaggcagtcgggcct
ttccgttcctccagcagctcattccctcctgttctgttcttccatgtttggcgtccgctc
catcagacctggacctcggagttgacccagagggcgggtctgttatctgaccttcagcag
cgctcgccagaatgcggttccaagttttataaatggaggaagaacatttccggcagaggt
ggaggagatggtggcgctctgctcaggctgcttagagggtggcttcaggttaatgatccg
ccgcacctgctgctccagcagattaacctggagggaccgggacaacaagtcatccgagtc
acgtccagaatcagcagggaggaggaggaggaggaggaggaggaggaggaggaggacctg
ttctcctcgtcctgcagcagattggatgaagaaaagctaagatctgaccctcccccacct
gtttctgctccgctgtgcgtccaggcggcgtgcatccccgtcctgctgagtaacggctgg
gagctgcccttctctgatgtcatccagtggaaccaggccgtcgtcgagggagacgagagg
ttactgctgcaggtgccatccacggtgcgggcggtaccaaaccagcgggtcctggagctc
cgtcagaggacacagatgttatgggacgcctacttttcctctgtggacaagattgtcctc
accacactggagatcatcaaggaccggatcttctctcacatctccaggaacaagtacatg
tggaactcgctgccaggaggtctgctggttctgccagagttctccacccacctggcccac
ttccccttctactacctgggcctcgggatcagttctggtcacgagttcaccgccgtcatc
cacgccgtctcgccattggtctcccagtcgcagccaatcatgaagctgcttcaggtcgtc
tccaagtccaagtactgctcacagatcatcatcctgtggaactgcgagaagccccccccc
agccgcagcaagtggccccccatgcccgtccctctcatcgtgacggagggcaggaggaag
accaccagccgcttcctgcctcacgtcgccatagagacggaggcggtgcttagcctggac
gaggacacggtgctgctgaccagcgaggtgaacttcgccttcctggtgtggaggagcttc
ccggaccggatcgtgggctatcctccccggagccacttctgggacccgctgaagcaggcc
tggggctacacctccaaatggaccaacgagtactccatggtcctgacgggcgccgccttc
taccacaggtactacaacttcctgttctcccacttcctgccgcagtcgctgcgggcgctg
gtagaccgaaccgccaactgcgaggacatcctgatgaacttcctggtgtctgccgccacc
cacctaccgccagtcaaggtggcccaaaggaagcagtacaaggaggttctgcccccgcag
ggcgtgaacagcgccccctgggcccacccggagcacttcgcccagcggcaggactgcgtc
aacgccttcgccagctggttcggctacatgccgctagtccactcccagctgcgcctcgac
ccggttctcttcaaggaccaggtgtccgtcttccggaagcggtacaaagacctggagcgg
gcgtag
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