Cyprinodon variegatus (sheepshead minnow): 107094907
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Entry
107094907 CDS
T06110
Name
(RefSeq) toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107094907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvg04054
]
107094907
04090 CD molecules [BR:
cvg04090
]
107094907
Pattern recognition receptors [BR:
cvg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
107094907
CD molecules [BR:
cvg04090
]
Proteins
107094907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_6
LRR_NXF1-5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
107094907
NCBI-ProteinID:
XP_015246283
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MTAKCWIHLLLLGLYCMLEIQPSACKIRWSAQFLCDVMEPNISSVRFDCSARALEKVPEG
ITNNVTALDLSENSLKTIKADAFSGLLNLTWLNLNCANLKRNVIFKANLKSLTKLHELRL
AGNGFDEIPNNLPESVEILELKNNNITFLRDRSFAGLPNLKQLWLSNNCYYWNPCGKYFN
ISENCFTHMSKLQDLDLSYNNLSHVPKGLPESLTMLNVSCNRIQHISKEDFFGLNQLKLL
KIQGNCPRCENAPFPCIPCPKRSLQIDPDAFENLSQLEELNMGGNSLEYLNPLWFKNLRK
LKHLLLSFNFLLSEFTGKAEFLRYLPRLEVMDFSFNYALKLYPKTINLSNEFSKLHSLRT
LHMEGLVFQNIGPDTLKSLYGLKNLSALNLGTNFIIWCDSTVFRKFIFLKVIYLAENRLC
PTPHINPSCSENGYTQQADFSISSFIKLPPKDFLFELSHGLIKQQCFNSGRVLILSSNNL
FFISQKQFEGYGDIACLNLSGNGFSSALNGTEFSLLPNLTYLDLSFNKIDLAYDYAFQEL
KKLEVLDISWNSHYFKSYGITHNLNFIKNLPVLRVLNMSHNSISTLTTKQMHSSSLAELQ
FTYNQLGTLWKEGEDSYKTLFTNLKNLTVLDISWNNIKHIPLDVYEKLPRNLTELRISHN
KMTDFLWDSLSYFPHLRILDLSHNSLSNIAGVKKATSLSLTFLDLTHNLIFHLGKSFFSG
IKTLETLSLSSNKLNIINQSTFQPKPENLKTLFLQRNPFQCTCDSLDFIVWIGKGEVKIP
RLTTDVRCETPEKDRNQPLIYFNIDQCVNDDEAFRMYILTTFFLIVFMFVATVAHMFYWD
ATYVMHYIKAKLKGYRSLYSQENIYDVFVTYDTKDPRVSDWVMMNLRVKLEEEGEKLLPL
CLEERDWLPGVPLVDNLTQSIRNSRKTLFVLTEGYVKTGVFKLAMYLAHQRLLDENMDVI
VLLMLEPVLQHSHFLRLRRRLCEKSVVEWPRTAAAEPWFWQNLRNVVRVDNQIMYGKTYK
KFFNSR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaagtgctggattcatctgcttctccttggtctatactgcatgctggagatc
caaccttctgcctgcaaaattcgctggagtgcacagttcctgtgtgatgtgatggagcct
aatatttcttcagtccgatttgactgtagtgctcgagctctagagaaggtacctgaaggg
ataactaacaatgttactgcccttgatttatcggaaaattccttgaagacaattaaagct
gacgcgttttcaggtctgctgaatctgacttggcttaatctcaactgtgcaaacctgaag
aggaatgtgatctttaaggcaaatctcaagagcctaacaaaactgcatgagttgaggttg
gctggtaatggttttgatgaaattccaaacaacctccctgaaagtgtggaaatccttgag
ctgaaaaacaacaacatcacatttctgagagacaggagctttgctggtttaccaaacctg
aaacaactctggttatctaataactgctactactggaatccatgtggaaaatattttaac
atctcagaaaactgttttacccacatgtccaaactgcaagatctggatctgtcttataac
aacttaagccatgttccaaaaggcctaccggagtctttgacaatgcttaatgtgagttgt
aacagaatacagcacatatcaaaggaagacttttttggtttaaaccagttgaaactcctt
aaaatacaaggaaactgccccagatgtgaaaacgctccttttccatgtataccctgccct
aaacgttcacttcaaattgaccctgatgcatttgaaaatctgtcacaactcgaggaactc
aacatgggaggaaactctctggaatatctgaatccattgtggtttaagaacctaaggaag
ctgaaacatctgctcctttcatttaactttttactcagtgaatttactggaaaggctgag
ttcctgcgatacctcccaaggctcgaagttatggatttttctttcaattatgctttaaaa
ctttatcctaaaaccattaatctttcaaatgagttttcaaaacttcattcattaagaacc
ttgcatatggaggggttggtcttccagaacattggaccagacacactcaagagtctttat
ggacttaaaaatctatcagccctgaatttggggactaactttattatttggtgtgattcc
actgtttttaggaagtttatttttttgaaggtgatttatttggcagaaaacaggctctgt
cctactccacatataaatccttcttgctcagaaaatggatacactcaacaagccgatttt
tcgatttcttcatttataaagcttccgcctaaagactttttatttgagttatctcatggt
cttataaagcaacagtgttttaattctggacgagttctaattcttagttcaaataatttg
ttcttcatttctcaaaagcagtttgaaggttatggggatatcgcctgtctgaatctatca
gggaatggattctcttctgcacttaatggcacagagttctcattactgcctaatttgacc
tacttggacttgtcttttaataagatcgatctggcttatgattatgcctttcaggaactg
aaaaaacttgaggtgttagacatcagttggaattctcactactttaaatcttatgggata
acgcataatttgaactttataaaaaacctacctgtcctgagggtacttaatatgagccat
aattcaatttcaactttaacaaccaaacagatgcacagcagttctttagcagaactgcag
tttacatataaccagcttggaactctttggaaagaaggagaggactcctataagactctc
tttaccaacctaaagaatttgacagttctagatatatcctggaacaatattaaacatatt
cctctcgatgtttatgaaaagcttcctcggaacctgacagaactacgcatcagtcacaac
aaaatgacagattttttatgggacagtctatcttacttccctcaccttagaattttagac
ctgagccacaattccttgtccaatatagctggtgttaaaaaagcaactagcctctctttg
acttttcttgatctgactcacaatctcatttttcacttgggaaagtcattcttcagtggc
attaaaacccttgagactctgagcctcagctccaacaaactgaatatcatcaatcagtcc
actttccaaccaaaacctgagaatcttaagactttgtttttgcagagaaacccatttcaa
tgtacatgtgattctctggatttcatcgtatggattggaaaaggagaggtaaagattcca
agactgacaactgatgtaagatgtgaaacaccagaaaaggacaggaaccaaccactgata
tactttaatattgaccaatgtgtaaatgacgatgaggccttcagaatgtacattctcaca
accttcttccttattgtctttatgtttgtggcaacagttgctcacatgttctactgggat
gctacctatgtcatgcactatatcaaggctaaactgaagggatacagatcattgtactca
caggaaaatatttatgatgtctttgtaacctatgacaccaaagatccacgtgtatctgat
tgggtaatgatgaatctacgagtgaaattagaagaggagggtgagaagcttcttcctttg
tgcttggaggagagggactggctcccaggagtgcctctagtggataacctaacacagagc
atcagaaatagtcgcaaaaccctgtttgtcctgacagagggctatgttaagactggggtg
ttcaaactggcaatgtatctggcccaccagagactgcttgatgaaaatatggatgtgatt
gtgttgctgatgctggaacctgtgctgcagcattctcacttcctgcgcctaaggaggagg
ctgtgtgagaaaagtgttgtggagtggcccagaacagcagctgctgaaccttggttctgg
cagaacttgagaaatgttgtaagggtggataatcagatcatgtatggcaagacttataaa
aagttcttcaacagcaggtag
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