Cyprinodon variegatus (sheepshead minnow): 107095000
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Entry
107095000 CDS
T06110
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04020
Calcium signaling pathway
cvg04510
Focal adhesion
cvg04540
Gap junction
cvg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107095000 (pdgfrb)
04020 Calcium signaling pathway
107095000 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107095000 (pdgfrb)
04540 Gap junction
107095000 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
107095000 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cvg01001
]
107095000 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cvg04090
]
107095000 (pdgfrb)
Enzymes [BR:
cvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
107095000 (pdgfrb)
Protein kinases [BR:
cvg01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
107095000 (pdgfrb)
CD molecules [BR:
cvg04090
]
Proteins
107095000 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Claudin_2
Ig_VEGFR-1-like_5th
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
107095000
NCBI-ProteinID:
XP_015246435
Ensembl:
ENSCVAG00000010932
UniProt:
A0A3Q2CTR3
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MRRLVASVLHLMVVYTALVPFCCKVHSLEIFPNAEEFILIQGSSLNLTCSGSLSATWEFK
RDDTPNILDDLDEHGNPRYILFQTDPTSVSLTLNRVSWRHTGVYQCIDRLTDEMAEVTVF
VPDPEFWFVVRPHGMVAKTSEESIVPCVATNPNITVSLYEMDTHRFITGRYIPGEGYRAH
LEDRTYVCHGQLNGKLRESQSFDVFSITVPNGVDPYINTSKTVLKQGEPLTINCTVHGVD
LVSFYWNVPDTVADKVDQETDYSSLKGMQSRLTFPYTTVDHSGNYECEVVESTQGFTGSS
TVTITVLENGFVELKPARQQNISAKLQDNVELRVDITAYPPPKIRWTKDGTTIKEEKAIV
FRQEHEIRYVTILTLVRVRAEQKGLYTAIIFNGDDTKEVVFDLEVQVPARIKELTDHHLP
GLKDVVTCTAEGYPTPTIYWYSCDSMLKCNETAELHPLKPQPEELSIQTNVSYIKAREVS
RVSSQVIFHKPQQVTVRCEVFNQAGDDGRNIKLVHSTWFSRVAVLAAVLALVVIFMLSII
ILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRENLVLGRTLGSGA
FGRVVEATAYGLTHSHSSTKVAVKMLKSSARRSETQALMSELKIMSHLGPHLNIVNLLGA
CTKHGPLYLVTEYCRYGDLVDYLHRNKHTFLHYYAEKNQDSGCIISRGSTPLSQRKGYVS
FGSESDGGYMDMSKDEPSIYVPMQEQLDTIKYADIQPSPYESPYQQDLYQEQGGGRLDLV
ISDSPTLTYDDLLGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNE
IFYSALKRGYRMGKPAHASDEVYEIMKKCWDEKFEKRPEFSLLVHNVGNMLMDSYKKRYN
QVNENFLKSDHPAVARTKPRLSSPFPVTNHAFRSPSPVTYPLPGEHNQSPRPGDGWREAD
GQEAIPSYNEYIIPLPDLKPEEVFTEVASESPVSSLVLEEEADSTSQDTAETLPEEDRVE
DTSERDALLGSNGTPEVEDSFL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggctggtagcatctgtgctccacctgatggtcgtttatacagctttagtgcct
ttctgttgtaaagtgcacagcctggagatcttccccaatgcagaagagttcatcctgatt
caaggctcgtctctcaacctaacctgctctggctccttgagtgcaacttgggagtttaag
agggatgatacaccaaacatccttgatgatctagatgaacatggaaatccaagatacata
ttatttcaaaccgatcccacatcggtttccctgaccctgaatagagtgagttggaggcat
actggcgtctatcagtgcattgacaggctcacggatgagatggctgaagtgacagttttt
gtcccagatccggagttttggtttgtggtgaggccccatggcatggtggcgaaaaccagt
gaagaaagcatcgtcccttgtgtggccaccaacccaaacatcactgtgagtctgtacgag
atggacacccacaggttcataacagggcgctatatacctggcgaggggtacagggcgcat
ctggaggacagaacatatgtgtgtcatggacagctgaatggaaagctgagagaatctcag
tcttttgacgtgttcagcattacagtgcctaatggggtcgacccttacatcaacacttca
aagacggtcctgaagcagggcgagccgttgactataaactgcacggtgcatggagtggac
cttgtgtctttttactggaatgttccagacacagtggctgacaaggttgatcaagagaca
gactactcctccctgaagggcatgcagtccagactgaccttcccttatactactgtggac
catagcggaaactacgagtgtgaagttgtggaatcgacccagggcttcacggggtcttcc
accgtcaccatcactgtgctcgagaatggctttgtggagttgaagcctgcccggcagcaa
aacatttcagccaagcttcaggacaatgtggaactaagagtggacatcacagcctaccct
ccccctaagattcgctggaccaaagatgggaccaccatcaaggaagaaaaagctatcgtc
tttagacaggagcatgaaataaggtatgtgaccattctcaccctggtgagggtgagggcc
gagcagaaaggcctctacacggccatcatattcaatggagacgacacaaaggaggttgtg
tttgacctggaggtccaagttcctgctcggattaaagagctgaccgaccaccatctccca
gggttgaaagacgtggtgacctgcaccgctgagggctatccgaccccgaccatttactgg
tacagctgtgacagcatgctcaagtgcaacgaaacagctgaattgcatcctctgaagccg
cagccggaggagctgagcatccaaaccaatgtcagctatatcaaggcccgggaagtcagc
cgcgtaagcagccaggtgattttccacaagccgcagcaggtcacagttcgctgtgaggta
ttcaaccaagccggagatgacggaaggaacatcaaactggtgcacagcacctggttctcc
cgggtggcagtactggctgctgtcctggccttagtggtcattttcatgttgtctatcatc
atcctcattgctgtatggaggaagaaacctcgctatgagatcagatggaaggtcatagaa
tccgttagccaggatggacatgagtatatttatgtggatcccatccacctgccctatgac
ctggcctgggagatgcccagagaaaacctggtgttgggtcgaactcttggatcgggggct
tttggcagggtggtcgaggcaactgcgtacggtctcacacattcccactccagcacaaag
gtggcggtgaaaatgctcaaatcctcagccaggaggagtgagacgcaagcgctgatgtct
gagctgaagatcatgagtcaccttgggcctcatctcaacatagtcaacctgctcggagcg
tgcaccaaacacggtcctctttacctggttacggagtactgtcgttatggtgatctagtg
gactacctgcataggaacaagcacaccttcctccattactatgctgagaaaaaccaggac
agcggctgcatcatctccagaggaagcactcctctcagccagagaaaaggttatgtgtcc
tttggaagcgaaagcgatggcgggtacatggacatgagcaaagacgagccttcaatctac
gtgccgatgcaggagcaactggacaccatcaagtatgcagacattcagccatctccgtac
gaatccccctatcagcaagacctctaccaggaacaaggtggaggcagactagatctggtg
attagcgactcccccaccctcacctacgacgacctgctgggcttcagctaccaggtggca
aaaggaatggacttcctggcttcaaagaattgtgtccatcgtgacctggctgccaggaat
gtattaatctgtgaaggcaagctggtgaagatctgcgactttggcctggccagagacatc
atgcatgattccaactacatctctaaaggcagcacattcctacccctgaagtggatggca
ccggaaagtattttccacaatttatacaccaccctgagcgatgtttggtcatatggcatc
cttctttgggaaattttcactcttggaggaaccccttaccctgacttgcccatgaatgaa
atcttctacagtgctttgaagcgaggctacaggatgggcaagcctgcccatgcctctgat
gaagtgtatgagatcatgaagaagtgctgggatgagaaatttgagaagaggcctgagttc
tcactgctggtgcacaatgtcggaaacatgctgatggacagctacaaaaagagatacaac
caagtgaatgaaaacttcctgaagagtgaccaccctgcagtggctcgcaccaaacctcga
ctctcctcgccctttccagtcaccaaccatgccttcagatctccctctcccgttacctat
cccctcccgggagaacacaaccagagcccgaggcctggagacggctggcgagaggcagac
ggacaggaagccataccctcgtacaacgaatacatcattccgctccctgacttaaagcct
gaggaagttttcactgaagtggcgtcggagagcccagtgagctctttggttctggaagaa
gaagccgactccacgtctcaggacacggctgaaacacttccagaggaggacagggtggag
gacaccagtgagagagacgctctgttgggctccaatgggacgcctgaggtagaagacagt
ttcctgtag
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integrated database retrieval system
